The
Haloterrigena salifodinae
strain BOL5-1
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
fdhF
Gene ID
23855
Gene Name
fdhF
Annotation
formate dehydrogenase subunit alpha
Location
pHTS280_6:173654←176986
Gene type
Functional gene
GC content
0.646564656465647
Hydropathicity
-0.485855855855854
DNA (3333 bp,
Edit
)
>fdhF|23855|173654|Rev|176986
ATGAGTACTGACGACACACTTCCGGGCGTTCCCGATATCGAAGACTCGCAACCGAATACGCCGGTCTCCGCCACGTTCGA
GACCGGCACCGCGAACGACCCCGCCGTCGGTACCGACGACGAGCCGACGACGGTGACGATCAACGGCAAACCGGTGACTG
TTCCACCCGGGTCGACCATCATCGACGCGATGCAGACCGTCGACGACGAGACGGTTCGTGTCGATCCCGGCGCGGACGGC
GTTGATGACGACGCCGACGTCCCCGCGCTTTGTTACTACGACCGCGACGGCGACTGCAGCGGTGAGATCGGGCCGCGCAG
CGAGTGCCGGACCTGCATGGTCGAGACCGACGAGCACGGCCTCGTTCCCTCGTGTTCGTTCCCGGCCGAGGAGGGGCTTA
CCGTGCAGACGGACACTCCCGATGCCGAAGAGACACGCAGCGTCAACCTCGATCTGGTCCTCTCGAACCACAACCTCCGG
TGTACGACCTGCAACGGCAACGGCCGCTGCGAACTACAGGATACTGCAATCAGCGAGGGCGTCGACCATCCGCGCTATGG
CGTCTTCGGCGATCGTGACGAGTACGAACCGCTCGACGACAGTTCGTCGTTCATCCAGATCGACCGGAACAAGTGCATCC
TCTGCAACCGGTGTGTCGAGGGCTGTAACGACGTGCAGGTCGAGGGCGTCCTCCGCATCGAGGGCCACGGTGAGGACACC
CGAATCGGCTTCCAGTCCGACGCCGAGACGATGGCCGAGTCCGACTGTGTTTCCTGTGGTCACTGCGCGACCGTCTGTCC
GACGGGCGCGTTGACGGAGAAGGACATCGGCGGCGCCGCGACGCTCCCACTTCCAGGGTTCACTCAGCGCAACTCCATCG
GGACGGTTATCGGGCACGAGGATGCGGAAACACTCGACGACACGACCGCGCCGAATCGCTCGCCCGATCCCGGCGGAGAG
GATCTGATCGGAGCCGGCCCCAGCGTGAGTCCGGACGATCGAAGCGGCGTCGCCGGATTCATGGCCCAAAACAGGCGCCG
GGCGCTGAACCTCGCCACCGAGTACGGTCACAAAGCTATGCTGGCCGGCGAACACACCGCCGAGAACATCGCCACAAAGG
TGCTTCCCGAGGGGCGACTGTTCGACGTTGCGTCGGCCGTGAGCGACTACCGCCTCGGCAAGATCGACACGGAGGAGACG
ACGTGCGGGTTCTGTGCGGTCGGCTGCCGATTCGAGATGTGGGGCAAAGACGGCGATGCGATCGGTGTCCAACCCGTCGA
AGACCCCTCGAAGGCGCCCGCCAACAACTTCTCGACCTGCGTGAAAGGGAAGTTCGGACACGAGTTCGCCAACAGCGACG
AGCGGATCACGGAACCGCTCGTGCGCAACGAGGACGGCGAGTTCGAGACGGCGTCCTGGGACGAGGCGCTCGATCGCGTC
GCGAGCGAACTGCGCGCGATCCAGGACGAACACGGCGTCGACGCGGTCGGTTGTCTCGCGTCGTCGAAGGGGAGCAACGA
AGAGGCGTATCTCGTCCAGAAGTTCGCCCGACAGGTCCTCGGGACGAAAAACATCGACAACTGTGCGCGGCTCTGTCACT
CGACGACGGTGGCAGCGCTGCAACAGACGCTCGGATACGGCGCCATGACCAACCGTATCAACGAGGACGTCGGCGAGGCC
GACGCCTACCTCATCACCGGGTCGAACACGACGGAGTCGCACCCTGTTCTGGCGACCCGAATCAAGCAAAACGTCCGAGA
CGGGGCCGACCTGGTCGTCTTCGATCCCCGTGAAGTCGGCATCGCCGAGCACGCAGACCAATACACGCGGACCAAGCCCG
GGTACGACGTCGCCTGGCTCAACGGTCTCATTCGATACATCGTCGAGAACGAGCTCCACGACGAGGCGTTCATCGAGCGC
AACACGAAGGGGTTCGAGAAAGTCAAGGAGAAGGTACAGGCGTTCACACCCGAGAAAGTCGAAGAACTGGCGGGTGTTCC
GCCAGAAGAGTTGAAGTCCGCCGCCGAGACGCTCGCCGACGCCGAGACCGTCGTCTTCGGCTGGGCGATGGGGATGACCC
AGTCTAGCCACGGCACGCAGAACCTCCTCGCGATGGCCGATCTCGCCCTCACGCTCGGCCAGGTCGGTAAGCCCGGCGCC
GGGCTCTCACCCTTCCGGGGACAGAACAACGTGCAGGGCGGCGGTGGCGATATGGGAACGCTTCCCGGAAGCCTTCCGGG
CTACCAGGATCCAGCAGACGCCGAGGTCGCCGAAAAGTTCGAAAAAGCGTGGGGCGAGCGCCCGCCCGAAGAGCCGGGGC
TCAAGGTACCGGAGATGCTCGCAGAGGCTCACGAAGGCAACCTGCGGGGGATGTACGTCGTCGGGGAAAATCCCGCGCTG
TCCGAACCCGACATCCAGCACGCCGAAGCGGCGCTCGAGAAACTCGAGTTCCTCGTCGTCCAAGACATCTTCATGACGGA
GACGGCGACTCACGCGGACGTGATCCTTCCTGCAGCGACGTCGCCGGAGAAACACGGTACGTTCACTAACACCGAGCGCC
GCGTCCAGCGGGTGCGGTCAACTGCGACGCCGCCCGGGACGGCGCGCCAGGACTGGGAGATCACCCAAGACCTAGCTAAC
CGGCTCGGGTATACCTGGGACTACGACCATCCGCGGGAGATCATGGACGAGCTCAGCGACCTGGTCCCGATCTACGGTGG
CGTCAGCTACGACCGCCTCGAGTCGGGCGACGAGCACGGACTCCAGTGGCCCTGCTGGGACGAAGACCACCCCGGAACGC
CGTACCTCTACGATTACGAGGACGGGGAGTTCAACTTCGACGACGGGATGGCGCGCTTCGTGCCCGCGGACGGTGGACAT
CCCGGCGAGTTACCCGACGAAGAGTATCCGCTCACGCTCACCTCCGGGCGAGTGCTCTACCACTGGCATACCGGCCAGAT
AACCCGACGTGTCGAGGGGCTCATGAGCCACGTCGGCGAGAGCTTCGTCGAGATCAACCCCTCGACGGCCGACGAACTCG
GCGTCGCCGACGGCGAGTACGTTCGGGTCGAGTCTCGCCGCGGAGACATCGTCGTCAAGGCGACTGTGACCGACCGCGTC
GGTGACGGGACGCTATTCATCCCGATGCACTTCGCTGCCGGCGCGGTCAACAAGCTCACCCAGGAGAACTTCGACCCGCA
CACGGGAATTCCCGAGTACAAGGTCTCGAGCGTCCGCGTCGAACCGCTCGGATCGGACGCCAATCCGGACGTGCTGCAGG
CACCCGACGCCGGAGCCGATAGCGACGGCGGAACCGCAGTCAGCGACGACTGA
pI
MW (k)
Translation (1111 aa,
Edit
)
>fdhF|23855|gene
MSTDDTLPGVPDIEDSQPNTPVSATFETGTANDPAVGTDDEPTTVTINGKPVTVPPGSTIIDAMQTVDDETVRVDPGADG
VDDDADVPALCYYDRDGDCSGEIGPRSECRTCMVETDEHGLVPSCSFPAEEGLTVQTDTPDAEETRSVNLDLVLSNHNLR
CTTCNGNGRCELQDTAISEGVDHPRYGVFGDRDEYEPLDDSSSFIQIDRNKCILCNRCVEGCNDVQVEGVLRIEGHGEDT
RIGFQSDAETMAESDCVSCGHCATVCPTGALTEKDIGGAATLPLPGFTQRNSIGTVIGHEDAETLDDTTAPNRSPDPGGE
DLIGAGPSVSPDDRSGVAGFMAQNRRRALNLATEYGHKAMLAGEHTAENIATKVLPEGRLFDVASAVSDYRLGKIDTEET
TCGFCAVGCRFEMWGKDGDAIGVQPVEDPSKAPANNFSTCVKGKFGHEFANSDERITEPLVRNEDGEFETASWDEALDRV
ASELRAIQDEHGVDAVGCLASSKGSNEEAYLVQKFARQVLGTKNIDNCARLCHSTTVAALQQTLGYGAMTNRINEDVGEA
DAYLITGSNTTESHPVLATRIKQNVRDGADLVVFDPREVGIAEHADQYTRTKPGYDVAWLNGLIRYIVENELHDEAFIER
NTKGFEKVKEKVQAFTPEKVEELAGVPPEELKSAAETLADAETVVFGWAMGMTQSSHGTQNLLAMADLALTLGQVGKPGA
GLSPFRGQNNVQGGGGDMGTLPGSLPGYQDPADAEVAEKFEKAWGERPPEEPGLKVPEMLAEAHEGNLRGMYVVGENPAL
SEPDIQHAEAALEKLEFLVVQDIFMTETATHADVILPAATSPEKHGTFTNTERRVQRVRSTATPPGTARQDWEITQDLAN
RLGYTWDYDHPREIMDELSDLVPIYGGVSYDRLESGDEHGLQWPCWDEDHPGTPYLYDYEDGEFNFDDGMARFVPADGGH
PGELPDEEYPLTLTSGRVLYHWHTGQITRRVEGLMSHVGESFVEINPSTADELGVADGEYVRVESRRGDIVVKATVTDRV
GDGTLFIPMHFAAGAVNKLTQENFDPHTGIPEYKVSSVRVEPLGSDANPDVLQAPDAGADSDGGTAVSDD
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment