The
Halogeometricum borinquense
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
Hbor_05910
Gene ID
5910
Gene Name
Hbor_05910
Annotation
ABC-type dipeptide transport system, periplasmic component
Location
chromosome:553755←552103
Gene type
Functional gene
GC content
0.59
Hydropathicity
-0.604363636363636
DNA (1653 bp,
Edit
)
>Hbor_05910|5910|553755|Rev|552103
ATGTCAGATAAAAACAATACAACTCACAGTAAACTGAACCGTCGCCGTGTCCTCCAAGGCCTCGGTGGTGCCGGTATCGC
AGGCCTCGCCGGGTGTGCTGGCGGCTCCGACACCGGAACCGACAGTGGAAACACAGACGGTGGGAACGAAGAGTCGAACA
ACAAGCTCAAGATGGCCCTCGTCAAGAGCCCCATCGAGTTCGACCCCATCATCGCAAACGACGTTCCGTCGTCGCAGGTC
ATCGACCGTATCGTCGAAGGCCTCTACACGTACGACGAGAGTACGGGTATCGTCCCGGCCCTCGCCAAGGGCGAACCCGA
AGTGTCCAAGGAAGGCAAACGGTACGTCGTCAAACTGAACAGCGATGCGACGTACTCCAACGGTGACAAAGTCACGGCCG
AGGACGTGAAATACTCGTACACGGCCCCGGTCACCGAAGAGACCGAGAACGCCTCCGAACTGAACATGATCGACACCATC
ACGGTTGTCGATGAAGAGACGGTTCAGTTCGACCTGAAGTACGCGTACGCGCCGTTCATGACCACGCTCACGTGGTACGT
CGTTCCGAAGTCCGTCCGCGAGGAGGACAAGAATGCGTTCAAAAGCGGCGACAGCCTGATCGGCTCCGGCCCGTTCGTCT
TCGATAGCTGGCAGGAAGGCCAGTACGCTCGCATCAAGGCCAACGAGAACTATTGGGGCGAACCGAAGCCGAAAGTTCCG
GAAATCGAATTCGTGCCGGTCACTGAGGCGACGACGCGCGTCACGACCCTTAAGAACAGCGAGAACGACGTTATCGAGGA
GATTCCGCCGAAGCAGTACCCGACGGTCCGCAGCATCTCCGACGCAAGCATTCAGGAAGTGCCCGGTATCGGGTACTTCT
ACGCGGCGTTCAACTGTAAGGAAGGCCCGACGGCTGACCCGAAGGTCCGCGAGGCAATCGACTACGCGTTCGATATGGAT
CAGGCGGTCTCCTCCTACGTCGAACCGACGGGGATTCGTCAGTACAGCCCCTACCCGAAATCGATCTCCGAGGACTGGGG
CTTCCCGCTCGACGAGTGGAAAAGTATCCCCCACTCGAAGGACATCGACAAGACGAAGTCCCTGTTTGACGAGGCCGGCG
TGTCGGACGACTACTCGTTCCAGGTCATCGTCCCGCCGGACGACAAACGTGAACAGATCGGTATCTCCATCTCCAACGGT
ATCAAGGAGGCCGGTTGGGACGCAAGCGTTCAGCGTCTCGACTGGGGTGCGTTCCTCGACAAGTACGTCTCCGGCAGCGA
GGACGACTACAACATCTACACGCTCGGTTGGTCCGGCTCGCCCGACCCCGACGCGTTCTCGTACTTCCTGTTCGGCCGTG
ACGAAGACACGCTCGGCGTGACGAACGGGACGTACTACGGGAACAACAGCGAGTCCGGCAAAGAGGTCAGCGAGAAGTTC
ATCAAAGCGCGTCAGATGCTCGACCGTGACAAGCGTAAACAGCTCTACACGGAAGCGACGACGACGCTTCTCGAAGACCG
TGCGCACCTGCCCGCGTACAACCTCAAGAACAGCTTCGGCGTGAAAGACTACGTCAAAGACTTCCACGCCCACCCGGTGG
ACAGCTTCACGGTGGCGACCGACTACAACAACCTCTCTGTCGGTACGAAATAA
pI
4.3455
MW (k)
60959.3
Translation (551 aa,
Edit
)
>Hbor_05910|5910|gene
MSDKNNTTHSKLNRRRVLQGLGGAGIAGLAGCAGGSDTGTDSGNTDGGNEESNNKLKMALVKSPIEFDPIIANDVPSSQV
IDRIVEGLYTYDESTGIVPALAKGEPEVSKEGKRYVVKLNSDATYSNGDKVTAEDVKYSYTAPVTEETENASELNMIDTI
TVVDEETVQFDLKYAYAPFMTTLTWYVVPKSVREEDKNAFKSGDSLIGSGPFVFDSWQEGQYARIKANENYWGEPKPKVP
EIEFVPVTEATTRVTTLKNSENDVIEEIPPKQYPTVRSISDASIQEVPGIGYFYAAFNCKEGPTADPKVREAIDYAFDMD
QAVSSYVEPTGIRQYSPYPKSISEDWGFPLDEWKSIPHSKDIDKTKSLFDEAGVSDDYSFQVIVPPDDKREQIGISISNG
IKEAGWDASVQRLDWGAFLDKYVSGSEDDYNIYTLGWSGSPDPDAFSYFLFGRDEDTLGVTNGTYYGNNSESGKEVSEKF
IKARQMLDRDKRKQLYTEATTTLLEDRAHLPAYNLKNSFGVKDYVKDFHAHPVDSFTVATDYNNLSVGTK
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment