The
Halogeometricum borinquense
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
Hbor_07880
Gene ID
7880
Gene Name
Hbor_07880
Annotation
carbamoyl-phosphate synthase large subunit( EC:6.3.5.5 )
Location
chromosome:728840→732079
Gene type
Functional gene
GC content
0.63
Hydropathicity
-0.27979610750695
DNA (3240 bp,
Edit
)
>Hbor_07880|7880|728840|For|732079
ATGATGACTGACGAGGACACCTCGACTGGCTCTCAGGACGGGAGCGAGAACCGGACCATTCTACTCATTGGAAGTGGGCC
CATTCAGATCGGACAGGCTGCTGAGTTCGACTACTCCGGCGCGCAGGCGTGTCGAGCACTGCAGGAGGAAGGGGCACGAG
TCGTCCTCGTCAACTCGAATCCTGCGACGATCATGACCGACCCGGAGATGGCTGACAAGGTCTACATCGAACCCATTACC
ACCGAAGCCATCTCGGAGGTCATCGCAAAGGAGAACCCTGACGGGGTTATCGCCGGACTCGGTGGACAGACCGGGCTGAA
CGTTACCGCCGAACTCGCGGAGGAAGGGGTCCTTGAGGAGTACGACGTGGACATCATGGGGACGCCGCTTGACACCATCT
ACGCGACGGAGGACCGCGACCTGTTCCGTCAGCGTATGGAGAACATCGGCCAACCGGTTCCGCGTTCGACCACCATCTCC
CTCGAAGACGACGAATCCGTGACGTCCATCACGGAAGACGACCTGAGTGACCGCGTTGAAGCGGCCGTCGAGGAAGTCGG
CGGCCTCCCCGTCATCGCCCGTACGACGTACACGCTGGGCGGGTCGGGATCCGGCGTCGTCCACGAGATGGACGAACTCG
TCGCCCGCGTCCGCAAGGGACTTCGCCTCTCGCGTAACAGCGAAGTGCTCATCACCGAGTCCATCTCGGGATGGGTCGAA
CTGGAGTACGAAGTGATGCGCGACGCCGACGACTCCTGTATCATCATCTGCAACATGGAGAACATCGACCCGATGGGTAT
CCACACCGGCGAGTCGATGGTCGTCACGCCGTCGCAGGTGATCCCCGACGAAGGACACCAAGAGATGCGCGACGCCGCGC
TCGAAGTGATCCGTGAACTCGGGATTCAGGGCGGCTGTAACATCCAGTTCGCGTGGCACGACGACGGCACGCCCGGCGGC
GAATACCGCGTGGTCGAAGTGAACCCGCGCGTCTCTCGTTCGTCGGCACTGGCCTCGAAGGCGACTGGTTACCCCATCGC
CCGCGTGACGGCGAAGGTCGCCCTCGGCAAGCGTCTCCACGAGATTGAAAACGAGATTACGGGTGAGACGACGGCGGCCT
TCGAGCCCGCAATCGACTACGTGGTGACGAAGATTCCGCGGTGGCCCAAAGACAAGTTCGACGACGTGGATTTCGAGCTT
TCGACGGCGATGAAGTCCACAGGCGAGGCGATGGCTATCGGACGGACGTTCGAGGAGTCACTCCTGAAGGCGCTCCGTTC
GACCGAGTACGACCCCGCCGCCGACTGGGGCGAGGTCTCCGACGACGAACTCGAATCCGAGTATCTCGAAAAGCCGACGC
CGGACCGTCCGTACGCCATCTTCGAGGCGTTCGAGCGCGGCTACACGGTTGAAGACGTGGTCGAACTGACCGACATGAAG
ACGTGGTACGTCGAACGGTTCAAGCGCGTGACCGACTCTGTGGCCGCTGCACAGGACGGCGACTTCACGGCCGCCGCCAC
CGCCGGTCACACGAACGCTGAAATCGCCACCACGACGGGAAGCGACGTTTCCGCTGTCGAGGCGGACGTTCCCGGTCGCA
CGTACAAGCAGGTAGACACCTGCGCCGGCGAGTTCGCCGCACAGACACCGTACTACTACTCCTCGCGGAAGCCCGAGTTC
TACTCCGGTTCCTCCACGGGAGACGATGCGGCGGGCGAACTCCGTGTTGACCGCGATGTCGAGAGCGTCGTCGTCGTCGG
CGGCGGTCCCATCCGTATCGGACAGGGTGTCGAGTTCGACTACTGCTCGGTCCACGCCGTCCGCGCACTCCGTGAGATGG
GTATCGACGCACACGTCGTCAACAACAACCCCGAAACGGTCTCGACCGACTACGACACCTCAGACGGCCTGTTCTTCGAG
CCGATTACGGCAGAAGAAGTCGCGGACGTTATCGAGGCAGTTGACGCCGACGGCGTGATGGTCCAGTTCGGTGGACAGAC
CTCGGTCAACATCGGCCACCCGCTCGAAGCGGAGATCCAGCGCCGCGACCTCGACTGTGAGATTCTCGGGACGACCGTGG
ACGCGATGGATCTCGCGGAGGACCGCGACCGGTTCAACGTCCTGATGGACGAACTCGGAATCCTGCAACCCGAAGGTGGC
ACGGCAACGAGCGAGGAGGAAGCGCTCGAACTCGCCCGCGATATCGGCTACCCCGTCCTCGTCCGCCCGTCGTACGTTCT
CGGCGGTCGCGCGATGGACGTGGTTCACTCCGACGAGGAACTGAAGACGTACATCGAGGAAGCAGTTCGCGTCTCGCCGG
ACAAGCCCATCCTCGTGGACGAGTTCCTCGCCGACGCCGTCGAACTCGACGTAGACGCCGTCGCAGACGGGCGCCGCGCA
CTCATCGGCGGCGTGATGGAACACGTCGAGAGCGCCGGTGTCCACTCCGGCGACTCCGCGTGTATGATTCCGCCGCGGTC
GCTTGACGAGGAGACGATGGGGCGCGTCCGCGAAGTCACCGAAGATATCGCCACGGCTCTCGATACGGTGGGTCTGCTGA
ACGTCCAACTCGCTGTCAAGGACGGAGATGTGTACGTGCTCGAAGCGAACCCGCGTTCCTCGCGTACCGTGCCGTTCGTC
TCGAAAGCGACGGACGTCCCCATCGCCAAACTCGCCGCGAAAGTGATGGCGGGCGAGACGCTCGAAACGCTGGGTGCGAC
AGAGCAGATTCCCGAACACGTCTCGGTCAAGGAAGTTGTCCTTCCGTTCGACCGTCTGCCGAACTCCGACCCCCGTCTCG
GCCCGGAGATGAAGTCTACGGGTGAAGTGATGGGCACCGCGCGGTCGTTCGGTCGCGCCTACGACAAGGCGCAGGACGCG
ACGAGCAAGCCGGTTCCCGAATCGGGCACGGCCATCGTTGACCTCTCCGCCGAGGAGTTCCCCGACGAGGGAACCGAAGC
GGGCGAGGAACTTCGTGAGGGCTTTGCGGACCACTTCGACCTCGTGTCGTTCGAGGATACGGAGGAACGCGACGCCGCGA
TTCGTGCGGGCGAAGTTGACCTCGTGGTATCGCGCAACCGCGACTTCCTCGAACTGTGTGTCGAAGAGGAGATCACGTAC
TTCTCGACGCACGCCTCCGCCTCGGCCGCGCTCGAAGCGGTCGAGTCGAAGGACGAATCGCTCGACGTCCTCGCTATCTC
CGAACGTCCCAAGCAGACGGCCGACTGGGGCGCGAAGTAA
E.C.#
6.3.5.5
pI
3.986
MW (k)
116879
Translation (1080 aa,
Edit
)
>Hbor_07880|7880|gene
MMTDEDTSTGSQDGSENRTILLIGSGPIQIGQAAEFDYSGAQACRALQEEGARVVLVNSNPATIMTDPEMADKVYIEPIT
TEAISEVIAKENPDGVIAGLGGQTGLNVTAELAEEGVLEEYDVDIMGTPLDTIYATEDRDLFRQRMENIGQPVPRSTTIS
LEDDESVTSITEDDLSDRVEAAVEEVGGLPVIARTTYTLGGSGSGVVHEMDELVARVRKGLRLSRNSEVLITESISGWVE
LEYEVMRDADDSCIIICNMENIDPMGIHTGESMVVTPSQVIPDEGHQEMRDAALEVIRELGIQGGCNIQFAWHDDGTPGG
EYRVVEVNPRVSRSSALASKATGYPIARVTAKVALGKRLHEIENEITGETTAAFEPAIDYVVTKIPRWPKDKFDDVDFEL
STAMKSTGEAMAIGRTFEESLLKALRSTEYDPAADWGEVSDDELESEYLEKPTPDRPYAIFEAFERGYTVEDVVELTDMK
TWYVERFKRVTDSVAAAQDGDFTAAATAGHTNAEIATTTGSDVSAVEADVPGRTYKQVDTCAGEFAAQTPYYYSSRKPEF
YSGSSTGDDAAGELRVDRDVESVVVVGGGPIRIGQGVEFDYCSVHAVRALREMGIDAHVVNNNPETVSTDYDTSDGLFFE
PITAEEVADVIEAVDADGVMVQFGGQTSVNIGHPLEAEIQRRDLDCEILGTTVDAMDLAEDRDRFNVLMDELGILQPEGG
TATSEEEALELARDIGYPVLVRPSYVLGGRAMDVVHSDEELKTYIEEAVRVSPDKPILVDEFLADAVELDVDAVADGRRA
LIGGVMEHVESAGVHSGDSACMIPPRSLDEETMGRVREVTEDIATALDTVGLLNVQLAVKDGDVYVLEANPRSSRTVPFV
SKATDVPIAKLAAKVMAGETLETLGATEQIPEHVSVKEVVLPFDRLPNSDPRLGPEMKSTGEVMGTARSFGRAYDKAQDA
TSKPVPESGTAIVDLSAEEFPDEGTEAGEELREGFADHFDLVSFEDTEERDAAIRAGEVDLVVSRNRDFLELCVEEEITY
FSTHASASAALEAVESKDESLDVLAISERPKQTADWGAK
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment