The
Halogeometricum borinquense
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
Hbor_20120
Gene ID
20120
Gene Name
Hbor_20120
Annotation
small-conductance mechanosensitive channel
Location
chromosome:1922186→1923343
Gene type
Functional gene
GC content
0.62
Hydropathicity
0.26935064935065
DNA (1158 bp,
Edit
)
>Hbor_20120|20120|1922186|For|1923343
ATGTTCGCCCCACTCACCGACGCGTTGGCGGGTCTCTCAGCTATCGAGGCCACCGTCGGTCTCCTCCTTGTCTCTCTTCT
CGCCGCCGTCGCGTTGGAGTTCGTTGTTCTCCGTGCGGCGCGACGATACGTCGTTCACACCGATAGCACGTACGACGATA
TCGTTTTCTCGGAGTTGCGCCTCCCCTTGGTTGTTACCGCGGCGCTCACGGGTGTGTTGCTGCTCACCCAGGTCCCTGCG
GTCAGGGATTCGACGGTGTTCTCCGCCCAACTGCTGCGGAACTTTTTCGGTCGTCCCTCGCTCTCGCTTATCGTCCTCGT
CTGGGCGTACGCGGCTAACCGTGTCGTGAACCGGTTGGTTGAGGAAGTGAACGACCGAGGCGGGCGGTTCGACTTCGCGC
CCGTCTTCTCGAACGTCTGGACGCTCGTCGTCCTTCTCGGCGGTGCAGCCACTCTGCTTTGGCTGTGGGAAATCGAGATA
ACGCCACTGCTCGGGGCGGCGGGCGTTGCGGGGATTGCGGTCGGGTTCGCCGCCAAAGACACCGTCGCCAACTTCTTCGG
CGGTATTGCACTGTACTTCGACGACACGTACAAACTGGGCGACTGCATCGTCCTCGACGACGGCACCTCCGGATCGGTCG
TGAAGGTCGGTATCCGCTCGACGACGCTACTCACCCGCGACGAACTGATGGTAACCGTGCCGAACTCCGTCCTCAATGCG
GCGAAGATTACGAACGAGTCCGCGCCCCAGCGACGACGGCGTATCCGGGTTCCTCTCGGCGTCGCCTACGGAACGGATGT
AGATGACTTCGAAGCACTCGCTATCGAGGTCGCCGAAGCGGAGTCGTTGGTCCTCGATTCACCGAAACCGCGCATGCGAT
TCCGCCGGTTCGGTAGCTCCGCACTGGAGTACGAACTGCTCTGCTGGGTTGCTGCACCGACGCGTCGCCGCCGCGCCCAA
CACGAACTGAACCGCGCGCTCTATATGGCAGTGACCGACGCCGAGATAGAGATTCCGTATCCGAAACGCGACGTAACGTT
CTCGACGGCCGCATCCGAACCGGATGCTGGTAGCGTTGTCTCAGTGCGAGACGACGGGCACGTTAGAGCGGACGAGACTA
CTCGGGTGGAAGCAGAGAGACCGGGCGACACCGACTGA
pI
4.768
MW (k)
41858
Translation (386 aa,
Edit
)
>Hbor_20120|20120|gene
MFAPLTDALAGLSAIEATVGLLLVSLLAAVALEFVVLRAARRYVVHTDSTYDDIVFSELRLPLVVTAALTGVLLLTQVPA
VRDSTVFSAQLLRNFFGRPSLSLIVLVWAYAANRVVNRLVEEVNDRGGRFDFAPVFSNVWTLVVLLGGAATLLWLWEIEI
TPLLGAAGVAGIAVGFAAKDTVANFFGGIALYFDDTYKLGDCIVLDDGTSGSVVKVGIRSTTLLTRDELMVTVPNSVLNA
AKITNESAPQRRRRIRVPLGVAYGTDVDDFEALAIEVAEAESLVLDSPKPRMRFRRFGSSALEYELLCWVAAPTRRRRAQ
HELNRALYMAVTDAEIEIPYPKRDVTFSTAASEPDAGSVVSVRDDGHVRADETTRVEAERPGDTD
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment