The
Halogeometricum borinquense
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
Hbor_34540
Gene ID
34540
Gene Name
Hbor_34540
Annotation
penicillin-binding protein, beta-lactamase class C-like
Location
pHB400:180361←178457
Gene type
Functional gene
GC content
0.62
Hydropathicity
-0.0766561514195584
DNA (1905 bp,
Edit
)
>Hbor_34540|34540|180361|Rev|178457
ATGACATCCCCACTATCACGGCGACAGTTCCTATCGCGGTCGACTGCGGTCGGTGCCGGTACCGTCGTCGCTGCCAGCGG
TCTAGCGAGCGGCGAATCATCAGCGACACAGACACGGGATGACAGCCTCGAATCGGTTGTCAGCGACGCTGCCGAGCGTG
CCCTGTCGAACTACGACGCTGGCGGCTTGACAGTCGCCGTCGTCAAGGACGGGGAAGTCGCGCTCACAGAGGGATACGGA
CACGCGTACCAAAGCGAATCAGTCCCAGTCAAACCCGACGAGACGCTCTTTCGCGTCGGATCGGTGTCGAAAGTCGCCAC
GTGGACGGCCGCGATGCAACTCGTGGACCGAGACAAAGTCGAGGTAGACGCACCGGTCAACGACTCCCTCGACGCCGTCG
AAATCCCGCAGACGTACGACGAACCCATCACGCTCGAACATCTCGCAACCCACACACCCGGATTCGAACTTCGCGGATGG
GGCGACACGGTCAACAAACCACAATACGTCCGCCCGTTAGCCGAATCTGTTTCGACGAACGTACCGGGGCGGGTCAGACC
ACCCGGTGAACTCTGCCAGTACACCAACTATGCCGCCGCACTCGCGGGGCAGTTGGTCGCTGACGTGAGCGGACAGCAGT
TTGGATCGTACGTCACAAAGCACGTGTTCGAACCGCTCGGGATGACGAACAGTACGTTCCGACCGGCACCGTCGAAACTT
GTCCCGGCCAGCGGAAAGGCCGTCAAGGATACGGTGAGTTTCTACTCCGACGTTGCTCCGGCATCCGGACTGCACACGAC
CGGAAACGACATGGCGCGTCTGCTACAGGCCCACCTGAACGACGGCGTCGTAGACGGCGAGCGAATCCTCTCTGCGGACG
CTGTCGAAGAGATGCACAAGCAGTGGTACACGCCGCACGAGCGATTCGACGGGATGGCATTCGGTCTGTTCGAGGAGTCC
CGTGGCGACACCCGACTAGTGGGACACAGCGGTGCAGTGATGGATTTCGCCTGCGAATTTTCGCTGATTCCCGAGGACGG
CACCGGGTTGTTCGTCGTCGCCCACGGTACCGAGGCGTCGAGCGCCAATAATGAGGTAGTCGATGTATTGCTCGAACGGT
TCGCACCGGTCGAGACGGACGAAAAACAGCTCACCCCTTCGGGAATGCCGGAACGTGCGGATGAACTCGGCGGGCGCTAT
CGCTCCGTGAGCGTGACCGACAAGACCGCCAAGGACAAAGCCATCTTCGGCTACCTCAAGCGACAACCGGTAGATGTCCG
TGTCGCTGACGACGGCCGCGTCATCACCGAACAGGGCGACAGCGTAGACGAGTGGGTCGAAATCGAACCGCTCCTGTTCG
AACACGTCGAAAAAGACGAGAAAATACTGTTCAGAACCGAGGACGGGGAAATAACGCATCTGTTGCAGGGACTCGGTGCA
TACGAACAGATCGGATATCTCCAGCAGTTGTCCGTGCAGGGCTGGCTCGCGGCCGTGGCGACGGTGACCACACTAACCGG
GCTACTATGGTGGCCTGCAGCGCGAGCATGGCGTCACGTCCGTGGCGGCACAGCACCGCCACCGTCGGCAACACGGGCGC
GATGGACCGCCGCGGCCGGGATCGGTGGGCTGGTACTGTTCGTGGCTGCGCTAGCGGCGAGTTCCATTGTCGTGTCGGGG
ATGGACCGTCCGACGCTGTACAACCGGCCACCTGCGTGGTTCGACGCTGTGTTCGTCGTGCCGACCGTCGGCGCAATTGT
GACGCTCGTGGCAGCCGGGTTCGGCGCACGAGCGTGGTACGACGGGGAGTGGTCGCTCGTGTCCCGCGTCCACTACAGCC
TCGTCGTCGCCGCGACTGGTGTCATCTACTGGCTGTTGCACTACTGGAACCTGCTCGCGGTCTGA
pI
4.6779
MW (k)
68353.8
Translation (635 aa,
Edit
)
>Hbor_34540|34540|gene
MTSPLSRRQFLSRSTAVGAGTVVAASGLASGESSATQTRDDSLESVVSDAAERALSNYDAGGLTVAVVKDGEVALTEGYG
HAYQSESVPVKPDETLFRVGSVSKVATWTAAMQLVDRDKVEVDAPVNDSLDAVEIPQTYDEPITLEHLATHTPGFELRGW
GDTVNKPQYVRPLAESVSTNVPGRVRPPGELCQYTNYAAALAGQLVADVSGQQFGSYVTKHVFEPLGMTNSTFRPAPSKL
VPASGKAVKDTVSFYSDVAPASGLHTTGNDMARLLQAHLNDGVVDGERILSADAVEEMHKQWYTPHERFDGMAFGLFEES
RGDTRLVGHSGAVMDFACEFSLIPEDGTGLFVVAHGTEASSANNEVVDVLLERFAPVETDEKQLTPSGMPERADELGGRY
RSVSVTDKTAKDKAIFGYLKRQPVDVRVADDGRVITEQGDSVDEWVEIEPLLFEHVEKDEKILFRTEDGEITHLLQGLGA
YEQIGYLQQLSVQGWLAAVATVTTLTGLLWWPAARAWRHVRGGTAPPPSATRARWTAAAGIGGLVLFVAALAASSIVVSG
MDRPTLYNRPPAWFDAVFVVPTVGAIVTLVAAGFGARAWYDGEWSLVSRVHYSLVVAATGVIYWLLHYWNLLAV
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment