The
Halogeometricum borinquense
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
Hbor_21540
Gene ID
21540
Gene Name
Hbor_21540
Annotation
ABC-type antimicrobial peptide transport system, ATPase component
Location
chromosome:2058684←2057989
Gene type
Functional gene
GC content
0.59
Hydropathicity
-0.317316017316018
DNA (696 bp,
Edit
)
>Hbor_21540|21540|2058684|Rev|2057989
ATGTCCATCATCGAACTGGAAAACGTGTGGAAGCGGTACGAAAGCGGTACCGAGACTGTCGAGGCCCTGAAAGATGTAAA
CTTCACAGCTCAACCCGGCGAATTCGTCGCCATCATGGGTCCGTCCGGGAGTGGTAAGTCCACGATGCTGAACGTCATCG
GTCTCCTCGATGCTCCCAGTGAAGGAGTCATCCGTCTCGACGGGCGCGACGTAACCGATCTCACAGATGAGGAGATGACG
ACCCAGCGAAAGCGGGCTATCGGGTTCGTCTTCCAGAACTTCTTTCTCATCCCGACGCTGTCGGCCTTGGAGAACGTCGA
GATGCCGACACTGTTCGAAAACGACCCTGAGGCCCGCGAGCGGGGGACGGAACTGCTCGAACGCGTCGGCCTCGGCGACA
GACTCACCCACCGACCGGATCAGCTCTCCGGCGGACAGAAACAGCGCGTCGCTATCGCGCGTTCGCTTATCAACGAACCG
CGTATCCTGCTGGCGGACGAACCGACTGGGAATCTCGACCGCGAGACTGGTCGTGACGTACTCGAACTGTTCACGGAGCT
CAAAACCGAGGCAGACGTGGCGATCATCGCCGTCACGCACGACGACCAACTCCGCGAGTACGCCGACCGGGTTGTCAACC
TCGTCGATGGCGTGCTGACAGAAGAAAAACAGGTCATAGAGGGGTACGGGACGTGA
pI
4.2158
MW (k)
25673.9
Translation (232 aa,
Edit
)
>Hbor_21540|21540|gene
MSIIELENVWKRYESGTETVEALKDVNFTAQPGEFVAIMGPSGSGKSTMLNVIGLLDAPSEGVIRLDGRDVTDLTDEEMT
TQRKRAIGFVFQNFFLIPTLSALENVEMPTLFENDPEARERGTELLERVGLGDRLTHRPDQLSGGQKQRVAIARSLINEP
RILLADEPTGNLDRETGRDVLELFTELKTEADVAIIAVTHDDQLREYADRVVNLVDGVLTEEKQVIEGYGT
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment