The
Haloferax mediterranei
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
cbaA
Gene ID
944
Gene Name
cbaA
Annotation
cytochrome c oxidase polypeptide I
Location
chromosome:898623→900392
Gene type
Functional gene
GC content
63
Hydropathicity
0.749235993208831
DNA (1770 bp,
Edit
)
>cbaA|944|898623|For|900392 Haloferax mediterranei ATCC 33500 chromosome, complete genome
ATGGCGACCGCACGTAGCGAACACGCGTTCGTCGACAAGTTCCCCGACGAGGCGGGCGTCATCAAGGCGACCTTCCTCGT
CGCGTTCGTTGCCCTCGGCATCGGCGCGTTCTTCGGACTCATTCAGGCGCTCCACCGGACCAACGTCGTCCGCGTTATCG
ACTCCGCGGACTACTACACGATGCTGACGGGCCACGGCGTCCTCTTGGCAATCGTCTTTACCATCTTCTTCCTCTGTGGC
GTCTTCCACTGGGCCACCGCGAGGAGTCTCGACCGCCCCGCAGAGAGCAAGTTGTTCTCGTGGGCGTGGGTCGGGCTCAT
GCTGACGGGGACGATTCTTGCTACCGTTGCTATTCTCGGCGGACTCGTTCCGAGCCTCGGAATGAGCGCGGACGTGCTGT
TTACCTTCTACGCGCCGCTGCAGGCACACCCGATATTCTACATCGGACTGGCGATGTTCATCGTCGGAACGTGGCTTGCC
GGAGCCGACTGGTTCCTCTCGTACCGGGCGTGGCGGAAAGACAACGCTGACGAACGCATCCCGCTGCAGGCGTTCATGGT
CCTTACGACCATGATTATGTGGTACATCTCGACCCTCGGCGTCGCCGTTTCGGTCGTGTTCTTCCTCATCCCGTGGTCGC
TCGGACTCATCGAGAGCGTCAACCCGCTTCTCACCCGCACGCTGTTTTGGTACTTCGGCCACCCAATCGTGTACTTCTGG
CTGATGCCGGCGTACCTCATGTGGTACACCGTCCTGCCGAAACTCGCCGGTGGACGGCTGTTCAGCGACCCGCTCGCACG
CGTCGTATTCGTGTTGTTCCTCCTGCTTTCGACCCCGGTCGGCATCCACCACCAGTACCTCGACCCGGGCATCGCGGAGG
GCTTCAAGTTCATCGCGATGACGAACACGATGTTCCTGCTCCTGCCGTCGCTTCTCACGGCGTTCACCGTCGTCGCCAGC
GTCGAACACGGTGCGCGCCAGCGCGGTGGCGAGGGCTACCTTCGCTGGCTCGGTGCGCTTCCGTGGCGCGACCCGGCTTT
CACCGGCATGGCCCTGGCGGGCGCGATGTTCGCCGCGGGCGGCTTCTCCGGCATGATTAACGCCGGAATGAACATCAACT
ACCTCATCCACAACACGCTGTGGGTTCCCGGCCACTTCCACCTGACCGTCGGCACCGCTGTCGCGCTGACGATGATGGCC
GGGTCGTACTGGCTGGTCCCGCAGGTCACCGGCACGAAACTCTACAGTCGACCCATCGGTCTCCTGCAGGTCATCATGTG
GTTCGTCGGGATGGTGTTCATGTCGAACGCGATGCACCGCGCTGGGCTGGCTGGTATCCCGCGTCGCACTGCGGAACCGC
AGTACCAGAACTTCGAGTTCCTGACGCCCATCGGGAGCATCTTCGAACTCCGCGTGCAGATTGCCCTCGGCGGCACGCTG
TTGTTCCTGTCCGTGGTGCTGTTCCTGTTCAACATCCTCCTGACCTCGCTCGGCGAGGAGTCAGAGCGGCCGGTCGATGC
GTACCTCCCAGAACCCCTCTCGGGTCCCGAGGGAAGCCCGCGCATCCTCGACAACCTCGCGATGTGGACCGGTATCGCCG
CTCTGCTCGTCGTGCTCGCCTACACGCTTCCGCTGGCTGGCATCATCCAGAACGGCGGCGGCCTGTTCGGTGGTGGACTC
CCCGTTCCAGCCACCGTCTCCGCAGGTCTCGACTTCGTGCTGATGACGGTTACGAGCGCGTTTAACACTCTGCTGGGGGT
GGTCGCGTGA
pI
7.2164
MW (k)
64324
Translation (590 aa,
Edit
)
>cbaA|944|gene cytochrome c oxidase polypeptide I [Haloferax mediterranei ATCC 33500]
MATARSEHAFVDKFPDEAGVIKATFLVAFVALGIGAFFGLIQALHRTNVVRVIDSADYYTMLTGHGVLLAIVFTIFFLCG
VFHWATARSLDRPAESKLFSWAWVGLMLTGTILATVAILGGLVPSLGMSADVLFTFYAPLQAHPIFYIGLAMFIVGTWLA
GADWFLSYRAWRKDNADERIPLQAFMVLTTMIMWYISTLGVAVSVVFFLIPWSLGLIESVNPLLTRTLFWYFGHPIVYFW
LMPAYLMWYTVLPKLAGGRLFSDPLARVVFVLFLLLSTPVGIHHQYLDPGIAEGFKFIAMTNTMFLLLPSLLTAFTVVAS
VEHGARQRGGEGYLRWLGALPWRDPAFTGMALAGAMFAAGGFSGMINAGMNINYLIHNTLWVPGHFHLTVGTAVALTMMA
GSYWLVPQVTGTKLYSRPIGLLQVIMWFVGMVFMSNAMHRAGLAGIPRRTAEPQYQNFEFLTPIGSIFELRVQIALGGTL
LFLSVVLFLFNILLTSLGEESERPVDAYLPEPLSGPEGSPRILDNLAMWTGIAALLVVLAYTLPLAGIIQNGGGLFGGGL
PVPATVSAGLDFVLMTVTSAFNTLLGVVA
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment