The
Haloferax mediterranei
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
fapJ
Gene ID
1228
Gene Name
fapJ
Annotation
flagellar assembly protein J
Location
chromosome:1162643→1164385
Gene type
Functional gene
GC content
59
Hydropathicity
0.415344827586207
DNA (1743 bp,
Edit
)
>fapJ|1228|1162643|For|1164385 Haloferax mediterranei ATCC 33500 chromosome, complete genome
ATGTCAGGAGAAACGAACACGACGGTACAAGCGGTTCAGGTTCGTGACTTCATCAGCGAAGTCATCGAGTCCTACGAGAA
GATGCCGATGGAGCTATCGCGGTACCTCCTTTTGGTCCTCGGCCCGGCCATCGTGTTCTTTCTCCTCTGTATCGCCGGAG
CGATTGCACTCCCGCTTCCGCTTCTCGTCCGCATTCCCGTGTTCCTCCTCGGTTCGCTGCTGCTTGGCGGTGCCGTGCTC
TACCCGCGGCTTCTCGTGGAGCAGACGAGACGCAGTCTGGAGAACCAGATACACCTCCTCATCACCCACATGACGGTTCT
CTCGACGACGAACATCGACCGCGTTGCCGTGTTTCGCACCCTCGCGCGCGAAGAAGAATATGGTGAGTTGGCAACGGAGA
TGAACCGAATCGTCCAACTCGTCGACGCGTGGAATCAGTCGCTCGACGACGCCTGCCAGCGCCGCGCACGAGAAGTGCCT
TCGAAACCGCTCGCGGACTTCCTCGACCGGCTTGCGTACTCCATCAACGCCGGTCAGAGCATCGACGACTTCCTGCTCGG
CGAGCAGAACGCGATGATTCAAAAGTACATCACCGTCTACGAGAGTGCTCTTGGGAACCTCGAGGTCATGAAAGACCTCT
ATCTCTCGATGATTCTGTCGATGACGTTCGCCATCATCAACGCCATCGTCCTCCCAATCCTGACGGGGACGGACGCGACG
ATGACCATCGGGGCAGTCATCGTGCTCTTCGTCTTCGTCCAACTGGGGTTCTACTTCGTCATCCGGACGATGTCACCGTA
CGACCCGCTTTGGTACCACCAGCGGGAGTACCGGACGAAGGCCAACCGGCAGATAGACATCACGCTGTACGGAGCGGTTG
GACTCTCTACCGCCATGATTATCGTGCTCGCACTGGGAACGTTCAACCTGACTGTCGTCGGTGAAATCGTCCGCCCAATC
ATGCTCGACCTCCCGGTTCCGCTTCTCATTTCGACCCCGCTGACCCCGCTTGCGGTCCCTGGCATCGTCGCCCGGCGTCA
CGAGAAACGCATCGGCGAGCGCGACGAGGAGTACCCCGGATTTATCCGCGCGCTCGGTGCCTCCGAGACGGCGAAACAGA
GTACGACGACCGCCGTGCTTGCGACGCTGAAGACGAAGGACTTCGGTGTTCTCTCGCGGGAAATCGCCCGGTTGCACACG
AGACTCCGGATGCGTCTCGACCCCGACCGGTCGTGGTTCTTCTTTACCGCCGAGACGAACTCGTATCTCGTCCAGAAGTT
CTCCGAGATGTACAACGTCGGCCGGTCGATGGGTGGTAAGCCGAAACTCCTCGGAGAGCTCATCAGTCGGAACATGAACG
AAATCATCAAGCTTCGTCGGCAGCGCAAGCAGTCGACGGTTACGCTCATCGGGGTTCTCTACGGTATCACGGCGTCCGCG
TCGTTCGCGTTCTTCATCGGGCTCGAAGTCGTCGAAATCCTCGCGTCGTTTTCGACCGAGATGAACCTCGACAGCCTTCA
GTTCGGGACGCTCATCTACGCCGGCGTCTACGACGTGCCCTTCATCGAGTACATGCTCACGCTTATCATCCTGTTCAACG
CCCTCCTGTCCTCGTTGATGATTCGGATGGTCGACGGGGGCCACAAAGCAAACGCGTATCTCCACTTCGTGATGCTCGTC
TGGGTTGGCTCCCTGATGGCAGTCGCAACCTCGTCGCTCGCAGGAGCGCTGATTAGTATATGA
pI
6.8949
MW (k)
64743.1
Translation (581 aa,
Edit
)
>fapJ|1228|gene flagellar assembly protein J [Haloferax mediterranei ATCC 33500]
MSGETNTTVQAVQVRDFISEVIESYEKMPMELSRYLLLVLGPAIVFFLLCIAGAIALPLPLLVRIPVFLLGSLLLGGAVL
YPRLLVEQTRRSLENQIHLLITHMTVLSTTNIDRVAVFRTLAREEEYGELATEMNRIVQLVDAWNQSLDDACQRRAREVP
SKPLADFLDRLAYSINAGQSIDDFLLGEQNAMIQKYITVYESALGNLEVMKDLYLSMILSMTFAIINAIVLPILTGTDAT
MTIGAVIVLFVFVQLGFYFVIRTMSPYDPLWYHQREYRTKANRQIDITLYGAVGLSTAMIIVLALGTFNLTVVGEIVRPI
MLDLPVPLLISTPLTPLAVPGIVARRHEKRIGERDEEYPGFIRALGASETAKQSTTTAVLATLKTKDFGVLSREIARLHT
RLRMRLDPDRSWFFFTAETNSYLVQKFSEMYNVGRSMGGKPKLLGELISRNMNEIIKLRRQRKQSTVTLIGVLYGITASA
SFAFFIGLEVVEILASFSTEMNLDSLQFGTLIYAGVYDVPFIEYMLTLIILFNALLSSLMIRMVDGGHKANAYLHFVMLV
WVGSLMAVATSSLAGALISI
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment