The
Haloferax mediterranei
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
HFX_1895
Gene ID
1895
Gene Name
HFX_1895
Annotation
HTR-like protein
Location
chromosome:1821761←1824349
Gene type
Functional gene
GC content
60
Hydropathicity
-0.407424593967517
DNA (2589 bp,
Edit
)
>HFX_1895|1895|1821761|Rev|1824349 Haloferax mediterranei ATCC 33500 chromosome, complete genome
ATGAGCGATTTCCGCGTCCTCTTCGTCGACGAGGGCACCTCGAACCTCACAGAGGCTATCGAGCGACGCGGATTCACTGT
CGAGGTACTCTCGACGTGTGACTCGATTTTCGACACACTGGACGAAAACATCGACGGGATTGTCGTAAACGGCGGCACCG
ACATCGAACTCGTCTCCCAGATTCGCGACCGTCTCGGCGTCGTTCCGGTCTTCTTCCTCGTCGACGACGAAACGGCTGTC
GAGCCGTCGTCGAGCGAAAAAGGAGCTATCAGCGTCGAGCGCCCGGAGTCGTCGGGGGCCGTCAACGCGCTTGCGACCCG
TATCGAACGGGCCGTCGAGTTCTCACAGTGGGCGTCGACCGCTCGGGACAGCGACTCGTTGTACCGGACGGTCGTCGAAC
AGAGTCACGACGCCATCTTCATCGCCCAAGACGGTGGCTTTCGCTTCTGGAATCGGCGGATGACCGAACTCACCGGTCTC
AGCGACGACGAACTCGCAGAGATTCCGCTTTTGGACATCATCCACCCGGATGACAGAGACAAAGTCACCGAGATTTCCGA
ACAACGACGGCAGGGCGGCGACGCGCCCGTGAGTTACGATGTCCGCCTCGTCGACGCCGACGGAGAGATTCACGAGTGTT
CGGCAAACGTCAAAGATATCGAGTATCACGGGTCCTACGGCGTGCTCGTCACGATGCGCGATGTGACGGAACGACGTGCC
ACCGAGGCGCAGTTTCGCGCCCTCGTCGAACTCGCACGCGACATCGTGACGCTCGTCGGGTCTGACGGTCGAATTAAGTA
CGAAAGTCCGTCTGTCGAGGACGTACTCGGCTTCGACCAAGACGAGTTGGTCGGCGCGCACATCAGCGACTACACCCATC
CAGAAGACTGGGAGCGCGTCGAAGAAGCGATGCAAAGGTCGCTCCAGAGTGGCGAAGATAAGAAAGAGCCGATTCGGTAC
CGACACCAAGATGCGGACGGAAATTGGCGCTGGCTAGAGTCTGTTGGAACCAACCAGACAGACACGTCAGTCGGTGGGTT
CGTTATCACTACCCGGGATGTAACCGAACAGCGGACCTACGAAGAGCGGTTACAGCGACACGAGAGTATCGTCGAAAGTA
TCCGCCAGGGTGCCTACGTGGTTGACCGCGAGGCCATCATCCAGTACGTTAACGAAGCGGCAGTAGCGCGGATATCGATT
CCCCGCGAGAAGTTCATCGGACAGCACATCTCGGTTGCACGCGAAGTAGACCTCCTCAACGATGACCAGTACGAGCGGGT
CAAGTCGGTCCTCGATGATGTCCTACGCGGCGAGAGCAATGGAGAGCGGTTTGAAATCGAGCTTTCTCGCCCCAACGGTG
ACTACGTCATCGAGTTCGCCATCTCACCGATTGTCGACGAGGATGGCTCAATTACTGGTGCGGTCGGCATCTCGACCGAC
ATCACGGAGCGAAAACGCTACGAGGAACAACTCAACGCGCTCCACGTCTCGACGCGAGAGCTAACAGCCGCAACCAGCCG
AGAGCAGGTTGCCGAGGTCGTCTGCGACGCCGCCAATGGTGTTCTCAACTACAACATCAGCGGGGTGCTGCTGTACGACG
AGTCGACAGACACGCTCGTCCCGACGGCGTTCACCGAAGAGGCACAGGAGATGTTCGGCGACATCCCCCCGCTCCCGCGC
GGAACAGGCTTCTCGTGGGAGGTCTTCGAGAGCGGAGAACCCCACCTGTACGACGACTTCGAATCGAGTCCGCACCGGTT
CAACCCCGTCGCCGAAATCAAAGAGGAGTTGGTCGTTCCGATTCCCGACCACGGCGTGTTCTTCGTGGGGTCGGTCGATG
AGGGAACCTTGGCCGACCAGCGCCTCACACTGGCGAAAGTATTGGCGTCGAACACGCGCGCCGCACTGGACCGAGTCGAA
CGCGAACAACTCCTTCGCCAGCGCGAGCGCGAACTCGCCCGACAAAACGAGCAACTCGAATCGTTCGCGTCGGCCGTCTC
GCACGACCTCCAGAACCCGCTCAACGTAGCCATGGGCTATCTCGAACTCGCCCAAGAACAGTTCGACAGCGACGAACTCG
CCCGAGTGCAAGTCGCGCACGAACGGATGGAGACCATCATTCAAGACGTGCTGGCGTTGGCACGGAGCGGGCAGACCGTC
GACGAGGTGGAGCCGCTACCGCTCAAACGAGTCGTCGCCGAAGCGTGGAACACCGTCGCGACCTCCTCGCCGGAAGCGAC
GCTCAAAATCGACGGTATCGCCGAGGTGGACGCCCATCACGGTCGGCTCCGACAACTCTTCGAAAACCTCCTGTCGAACG
CGATTCGCCACGGTGGCGACGACGTGACAATCCGGGTCGGACCGCTCGAAGCCCGACCGGGGTTCTACGTCGAAGACGAC
GGTCCCGGAATCCCACCGGACGAGCGTTCTCGTGTCTTCGAGTCGGGCTACACGACGAGTCCGGAGGGAACCGGATTCGG
TCTCAGCGTCGTCATAAGCGTCGTCAACGCACACGGATGGGATATCGACGTATCCGAAGGCGACGGCGGCGGAGCGCGAT
TCGAAATCACGACCGAAACCGGACGCTGA
pI
4.19
MW (k)
95904.8
Translation (863 aa,
Edit
)
>HFX_1895|1895|gene HTR-like protein [Haloferax mediterranei ATCC 33500]
MSDFRVLFVDEGTSNLTEAIERRGFTVEVLSTCDSIFDTLDENIDGIVVNGGTDIELVSQIRDRLGVVPVFFLVDDETAV
EPSSSEKGAISVERPESSGAVNALATRIERAVEFSQWASTARDSDSLYRTVVEQSHDAIFIAQDGGFRFWNRRMTELTGL
SDDELAEIPLLDIIHPDDRDKVTEISEQRRQGGDAPVSYDVRLVDADGEIHECSANVKDIEYHGSYGVLVTMRDVTERRA
TEAQFRALVELARDIVTLVGSDGRIKYESPSVEDVLGFDQDELVGAHISDYTHPEDWERVEEAMQRSLQSGEDKKEPIRY
RHQDADGNWRWLESVGTNQTDTSVGGFVITTRDVTEQRTYEERLQRHESIVESIRQGAYVVDREAIIQYVNEAAVARISI
PREKFIGQHISVAREVDLLNDDQYERVKSVLDDVLRGESNGERFEIELSRPNGDYVIEFAISPIVDEDGSITGAVGISTD
ITERKRYEEQLNALHVSTRELTAATSREQVAEVVCDAANGVLNYNISGVLLYDESTDTLVPTAFTEEAQEMFGDIPPLPR
GTGFSWEVFESGEPHLYDDFESSPHRFNPVAEIKEELVVPIPDHGVFFVGSVDEGTLADQRLTLAKVLASNTRAALDRVE
REQLLRQRERELARQNEQLESFASAVSHDLQNPLNVAMGYLELAQEQFDSDELARVQVAHERMETIIQDVLALARSGQTV
DEVEPLPLKRVVAEAWNTVATSSPEATLKIDGIAEVDAHHGRLRQLFENLLSNAIRHGGDDVTIRVGPLEARPGFYVEDD
GPGIPPDERSRVFESGYTTSPEGTGFGLSVVISVVNAHGWDIDVSEGDGGGARFEITTETGR
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment