The
Haloferax mediterranei
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
HFX_5118
Gene ID
5118
Gene Name
HFX_5118
Annotation
ABC transporter ATP-binding protein
Location
pHM300:128889←129953
Gene type
Functional gene
GC content
50
Hydropathicity
-0.296610169491526
DNA (1065 bp,
Edit
)
>HFX_5118|5118|128889|Rev|129953 Haloferax mediterranei ATCC 33500 plasmid pHM300, complete sequence
ATGTGTTCGCAATACGACAGAGAATACGGTGACCGAGGAGGTGGTGAACTCTCGAAATCTCGTTCGAAGCAACCAGCGGT
CGAGGTTTCCAACCTTACAAAACGCTACGGGGATGGAGAGAATTCCGTCGAGGCAGTAAGTGGAGTTACGTTCAGCATCG
AACAGGGGTCTATCGTTGGAATACTCGGACCAAACGGTGCTGGAAAAACGACGTGCATCAAATCACTGTTGTCCCTTGTC
GTGCCAACTGAAGGGACGACCAAAGTGGCAGGAGTAGATGTACAGCGGGACACGAGTACGGCATTCCAACGGATAGGAGC
AGTTCTCGAGGGGACCCGAAACATCTACTGGAGATTGACTGTTCGAGAGAACATGCGTTTCTTCTCGGCAATTGCCGGAC
GAAATCCGGATACTATGGACCAACGGCACGAAGAACTTCTGACGAAGTTCAACCTCAAAGACAAAGAGGACACTGTCGTA
CGCGAACTATCCCGAGGTCAAAAACAGAAAGTCTCAATCGTGTGTACGCTGGCACGCAACGCTGAAGTCGTATTCCTCGA
CGAACCGACCCTTGGATTGGACGTAGAAAGCTCGATTGAACTTCGGAAAGAACTTCGAAATCTTGCAGACGAAGAGGGGA
TCACAGTCGTCCTTACGAGTCATGATATGGACGTCATTGAGAGTGTGTGTGACCGGGTGATTATCATGAATAGCGGGCAA
ATCATCGCAGACCGGCCGGTTGCAGAGTTGCTATCGGTGTTTACTACTCAGAAGTACAAAATCACAACCAAAGCTCCTCT
CGCGACCGAACTCTACGAACAACTTGTGGACCAGTACGGGTTATCGAAACAGACGGAGGCAAACTCCAATGTGTACACGA
TTCAGGTCACGGGCGAATCGTTCTACGATGTCGTGAATCTACTTCAGGAGTACAACGTTCGGATACAGTCGTTTGACGCG
GTTGAAGTTGCTCTGGAGGATGTCTTTTTACACCTGACGGGCGACGGAATGGACGAAACGGACACTGGTCAGCGCTTGCT
CACCGAGGAGATAGCACATGAGTAA
pI
4.463
MW (k)
39247.1
Translation (355 aa,
Edit
)
>HFX_5118|5118|gene ABC transporter ATP-binding protein [Haloferax mediterranei ATCC 33500]
MCSQYDREYGDRGGGELSKSRSKQPAVEVSNLTKRYGDGENSVEAVSGVTFSIEQGSIVGILGPNGAGKTTCIKSLLSLV
VPTEGTTKVAGVDVQRDTSTAFQRIGAVLEGTRNIYWRLTVRENMRFFSAIAGRNPDTMDQRHEELLTKFNLKDKEDTVV
RELSRGQKQKVSIVCTLARNAEVVFLDEPTLGLDVESSIELRKELRNLADEEGITVVLTSHDMDVIESVCDRVIIMNSGQ
IIADRPVAELLSVFTTQKYKITTKAPLATELYEQLVDQYGLSKQTEANSNVYTIQVTGESFYDVVNLLQEYNVRIQSFDA
VEVALEDVFLHLTGDGMDETDTGQRLLTEEIAHE
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment