The
Haloferax mediterranei
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
abc02S
Gene ID
5266
Gene Name
abc02S
Annotation
ABC-type dipeptide/oligopeptide/nickel transport system, substrate binding protein
Location
pHM300:288084→289499
Gene type
Functional gene
GC content
57
Hydropathicity
-0.481104033970276
DNA (1416 bp,
Edit
)
>abc02S|5266|288084|For|289499 Haloferax mediterranei ATCC 33500 plasmid pHM300, complete sequence
GTGGCAGTCACCCGTGACCCAACACGGGAGAAGTGGGACGTGTACAACGGCGTGACTCCGTATTTCACCCACGTGTTCGA
ACCGCTCGTGGGTGTCACTGACGACATGCAGACTGAACCGCTTTTGGCGACGGATTGGGAGGCCGTCGACGAGACGACGT
GGGACTTCTCACTCCGAGAGGACGTGACCTTCCACAACGGTGAGCCACTGACTGCTGCTGCCGTCGTCCACTCGTTCGAG
AGCGTCTTCGAGCAATGGTCGTGGGTGCCCGGATGGATCGGTGTCGAACCCAACGGCGTAACAGCAGTCGATAAACACAC
AGTCAGGTTCCAGACGACAGAGCCGTTTCCGGCGTTTCCGGGAACAATTTCTCACAACTACTTCGGCATCCAACACCCCG
ATGCGACCGACACACCTGTTGGAACGGGGCCATTTCAGGTAAGTCACGTCGAAAAAGAGCAGTCAGTGACGCTCACGCCG
TACGAAGGATACCGGAACGATGCAGAACGACCCTCCAAGCTCACGTTCAAGTGGATTAAGGACCCGAATACCCGACTGCT
CTCCCTCGAAAAGGGGTCAATCGATATCGCACAGACGATTCCGAAGAGCAGAGCGTCGTCCGTTTCCGATGCCTCCGAGA
CAGCTATCGAAACAGGACTAAGCCCCTCCGCGGGGCTCGTCGCAGTCAATCTCTACAAATCGCCGACCGACGACGAACTA
CTCCGGAAAGCGCTCAACTGGGCTGTCGACCAGAAACAACTGGTCGAGAGTGCACTGAACGGAATCGGTAAACCGGCCCG
AGGGCCGATTTCCTCGGTGATTCCGTGGGCAGTCCACGACGACCTTCCGACATACGGCCCGGACAGAGAGAAGGCACGAG
AACTCGTCGAGAAGTCGAAGTACGACGGGGAGACACTCTCGATTCTGGTCAACAGCGAAAACACGGACGACGGAACAATC
GCACAGATTCTCAACGGCTGGTTCTCCGATATCAACGTCAAAAGCGAGATACGGCAGGTCGACCCGGCGTCGTTCAACGA
CACGTTCACGGCTGGCGAAGCGAACTTGACGCTCGTCGGGTTCGGGTCGAACAGCGCCGCGTGCGATTACCTCATTCGGG
CGATGTTCCACTCGGAGGGAAGCGATAATCGCAAACTACACGAACGGAACGGAACCGGCGTCTACAATCCCGGCCCCGAA
ATCGACCGTCTCATCGAAGATGGATACCGAGCCGAAACGATGGCAAAAAAGCGTGAGTACTACGGAGAGGTACAGAAACG
AGTCGTTGACACTGGGGCGGTTATCCCCCTGTACTATAATGAGCACGTCCTCGGACGCCAATCGAGTGTCTCCGGAATTG
ACGGCCATCCAATCGACAAGATGGTCGGCTGGTCGTCGCTCTCTCGGGAGCAATGA
pI
4.572
MW (k)
52198.9
Translation (472 aa,
Edit
)
>abc02S|5266|gene ABC-type dipeptide/oligopeptide/nickel transport system, substrate binding protein [Haloferax mediterranei ATCC 33500]
MAVTRDPTREKWDVYNGVTPYFTHVFEPLVGVTDDMQTEPLLATDWEAVDETTWDFSLREDVTFHNGEPLTAAAVVHSFE
SVFEQWSWVPGWIGVEPNGVTAVDKHTVRFQTTEPFPAFPGTISHNYFGIQHPDATDTPVGTGPFQVSHVEKEQSVTLTP
YEGYRNDAERPSKLTFKWIKDPNTRLLSLEKGSIDIAQTIPKSRASSVSDASETAIETGLSPSAGLVAVNLYKSPTDDEL
LRKALNWAVDQKQLVESALNGIGKPARGPISSVIPWAVHDDLPTYGPDREKARELVEKSKYDGETLSILVNSENTDDGTI
AQILNGWFSDINVKSEIRQVDPASFNDTFTAGEANLTLVGFGSNSAACDYLIRAMFHSEGSDNRKLHERNGTGVYNPGPE
IDRLIEDGYRAETMAKKREYYGEVQKRVVDTGAVIPLYYNEHVLGRQSSVSGIDGHPIDKMVGWSSLSREQ
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment