The
Haloferax mediterranei
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
speE
Gene ID
260
Gene Name
speE
Annotation
spermidine synthase
Location
chromosome:245263→246876
Gene type
Functional gene
GC content
64
Hydropathicity
0.0858472998137806
DNA (1614 bp,
Edit
)
>speE|260|245263|For|246876 Haloferax mediterranei ATCC 33500 chromosome, complete genome
ATGAATTCGACGCCCGAATTCCCCTCGCTTCGGGTGACGCGGCCCGAACTCGCGGTGTTCGTCTCCGGCATCACCAGCAT
GGGACTGGAGATTCTCGCCGGACGGATGGTCGCTCCCGAGTTCGGGAGCAGCATCTACACGTGGGGGAGCATCATCGGCG
TCTTCCTCGCCGCGTTGAGTCTGGGCTACTACCGCGGCGGGAAGCAGGCCACACAGGCGTCGAACGAAACACTCGTGCGC
GTGTTCGTCGCGACGGCGGCCTACATCGCTGGCGTCATTTTCCTCGGCGACCTGTTCTTACAGTCGACGGCCAGTCTTCC
GCTTCCCAGTCGATTCGCGTCGTTGCCGGCGGTCACGCTCCTCTTCGGCCCACCGACCTACCTTCTCGGGTACGTCAGTC
CCTACGCCGCGGAACTCTCCGGTCAGTCGGAGGTCGGTGCCGCGTCGGGGCACGTCTACGCCGTCGGTACCGTCGGGAGC
ATTCTCGGTGCGTTCGCCACGACCTATCTGCTCATCCCGTCGCTGAGCGTCACCGACATCGGACTGGTGTTTGGCCTCCT
GTCGGTTGGCACGGCGCTCGCGCTTGCTCGGCCTAACATCGGACAGGAAGCGGCCGTCTGGAGCGTCGGCATCGTCGTCA
TTCTGCTCGTCGCCGCGACGACCGGCGGTATCGGACTCGACTCCCGCGGCACCACCGTCTACCACACACAGACCGCCTAT
CAGGAGCTTCGCGTCTCGGACGCCGACGGCGTTCGAACGCTCTACCTCGACGGCCAACCTCACAGCGCGATGGACCTCTC
GGACCCGACCAGACACGTCTTCGACTACACGTCGTATTTCCACGCCCCGTTTCTCTTCTCCGACGACATCGACCGAGTGT
TGTTCGTCGGCGGCGGCGGCTTTACCGGTCCCCGCGTATTTCTGGAGACCTACCCGAACGTGACCGTCGACGTGGTGGAA
CTCGACCCCGAGGTGGTGGCTGTCTCGAAGGAGTACTTCGGCGTCGAGGAGTCCGACCGCCTGAACATCTACACGATGGA
CGGCCGGCAGTACCTCCGCGAGACGAACGAGACGTACGACCTCATCATCCTCGACGCCTACCGGAAGGACAAGGTCCCGT
TCGAGTTGACGACGGTCGAGTTCATGCAACTCACGTCCGACCGCCTCGACGACAATGGCATCCTCTTTGCAAACGTCATT
TCTGCGCCCAGCGGTCCCGCCTCGAAGTTCTACCGCGCGGAGTACAAGACGATGCGCGAGGTGTACCCGCAGGTCTACAG
TTTCCCCACCGCGGGGAGCGTCGTCGTCCAGAACATCGAGGTCGTAGCGACGAAAAACGACACGCTCGTCACCCGAGCGG
AGTTGCAGGCGCGGAATCAACGACGCGACATCGGTATCGACCTCGCGGCCGAACTCACGTCGTACCGAAATTCGACACCG
ACCGACGACGTACCGGTTCTCCGCGACGACCGCGCACCGGTCGACAGCCTCTTGGACCCGATGGTCGGCCAGCGCTACGT
CATCCAGCGGACGAACGAGACGAATCGAACGGAAACCGACCGAAGCGCAACTGCGCGCAACGCGGCCGCACAGAACGCCG
CCGCACCCCGATAG
pI
4.5373
MW (k)
58191.8
Translation (538 aa,
Edit
)
>speE|260|gene spermidine synthase [Haloferax mediterranei ATCC 33500]
MNSTPEFPSLRVTRPELAVFVSGITSMGLEILAGRMVAPEFGSSIYTWGSIIGVFLAALSLGYYRGGKQATQASNETLVR
VFVATAAYIAGVIFLGDLFLQSTASLPLPSRFASLPAVTLLFGPPTYLLGYVSPYAAELSGQSEVGAASGHVYAVGTVGS
ILGAFATTYLLIPSLSVTDIGLVFGLLSVGTALALARPNIGQEAAVWSVGIVVILLVAATTGGIGLDSRGTTVYHTQTAY
QELRVSDADGVRTLYLDGQPHSAMDLSDPTRHVFDYTSYFHAPFLFSDDIDRVLFVGGGGFTGPRVFLETYPNVTVDVVE
LDPEVVAVSKEYFGVEESDRLNIYTMDGRQYLRETNETYDLIILDAYRKDKVPFELTTVEFMQLTSDRLDDNGILFANVI
SAPSGPASKFYRAEYKTMREVYPQVYSFPTAGSVVVQNIEVVATKNDTLVTRAELQARNQRRDIGIDLAAELTSYRNSTP
TDDVPVLRDDRAPVDSLLDPMVGQRYVIQRTNETNRTETDRSATARNAAAQNAAAPR
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment