The
Haloferax mediterranei
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
xthA
Gene ID
550
Gene Name
xthA
Annotation
DNA-(apurinic or apyrimidinic site) lyase / deoxyribonuclease IV
Location
chromosome:517185→518039
Gene type
Functional gene
GC content
61
Hydropathicity
-0.333802816901409
DNA (855 bp,
Edit
)
>xthA|550|517185|For|518039 Haloferax mediterranei ATCC 33500 chromosome, complete genome
GTGGAGTTCGGCATGCGAGTTGGAGCACACGTTTCTATCGCCGGTGGCGTCGACAATGCGGTCGGAAACCAAGTCGACGT
CGGCGGGAACTGCGGTCAGATATTCACCCACTCTCCACAGGTGTGGCAGGACCCCAACATCGGCGACGAGGAGTCCGACG
CCTTCCGCGAGGGAACAGTTGAGTCGCTTGCGGGTCCGTGGGTCATCCACACGTCGTACCTCGTCAACCTCTGTACGCCG
AAAGACGGCCTGCGCGAGAAATCACTCGACTCCATGCAGAAGGAAGTCGACGCCGCGGCCAAACTCGACATTCCCTACGT
GAACGTCCACCTCGGTGCCCACACCGGCGCGGGTGAACAGCAGGGCCTCGAAAACGCCGTCTCCGTTCTCGACGAAATCG
ACGTCCCTGACAGTGTCACCATCCTCATCGAGTCCGACGCCGGGTCGGGCACGAAGATGGGTGGCGACTTCGCCCACCTC
GGATACGTCCTCGGAGAGTCCGAACAGGACCTGGATATTTGCCTCGACACTGCCCACGCATTTGCCGCGGGCTACGACCT
TTCGACGGCCGAGGGTGTCGCCGAGACGTTCGAAGAACTCGACGCCGAAGTCGGACTGGAGCACCTCAAGTGCGTCCACC
TGAACGACTCGAAACACGAGTGCGGCACCAACAAGGACGAACATGCCCATATCGGCAAGGGTCTCATCGGCGAGGAGGGA
ATGCGCGCGTTCATCAACCACGATGCCATCGTCGACAACGACGTCCCGCTCGTGCTGGAGACGCCGACGGAAAACGGCAA
GAGCTACGAGTGGAACATCGAGCGCGTCCGCGAGTTCCGCGCCGACAAGAATTAA
pI
4.1618
MW (k)
30566.6
Translation (285 aa,
Edit
)
>xthA|550|gene DNA-(apurinic or apyrimidinic site) lyase / deoxyribonuclease IV [Haloferax mediterranei ATCC 33500]
MEFGMRVGAHVSIAGGVDNAVGNQVDVGGNCGQIFTHSPQVWQDPNIGDEESDAFREGTVESLAGPWVIHTSYLVNLCTP
KDGLREKSLDSMQKEVDAAAKLDIPYVNVHLGAHTGAGEQQGLENAVSVLDEIDVPDSVTILIESDAGSGTKMGGDFAHL
GYVLGESEQDLDICLDTAHAFAAGYDLSTAEGVAETFEELDAEVGLEHLKCVHLNDSKHECGTNKDEHAHIGKGLIGEEG
MRAFINHDAIVDNDVPLVLETPTENGKSYEWNIERVREFRADKN
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment