The
Haloferax mediterranei
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
oppA
Gene ID
605
Gene Name
oppA
Annotation
dipeptide ABC transporter ATP-binding protein
Location
chromosome:570633→572078
Gene type
Functional gene
GC content
60
Hydropathicity
-0.428690228690229
DNA (1446 bp,
Edit
)
>oppA|605|570633|For|572078 Haloferax mediterranei ATCC 33500 chromosome, complete genome
ATGTACGACACGCTCATTAACTTCGAGCCAGGCAAGTCCACGCTGACGCAGGGGCTTGCAACGGAGTACACGCTGGAGGG
GAAGACGGCGTCCATCACGCTCCGCGAGGGTGTGAAGTTCCACAACGGCGAGGAGTTCACCGCAGCGGACTTCGTGGCGA
CGTATCGCCGTTTCGTCGACAATAGCTACGAGAACTACGCTGGCGACGACTACGTCTCCGCCTACGGTCCGTTCACGCTC
GGGTCCTGGATTGACGAGATTCAAGTCGATGGCGACTACTCGATGACCATCAAGTTGACCCAGACGTACGCACCGTTCCT
GCGCAATCTGGCGATGTTCGCGGCCGCCGTTCACTCCAAGGCCGCCATCGAGGAGTACGGGACGGAACTCAAAAAGAACC
CAGTCGGTACCGGTCCCTTCAAGCTGAGCAACCTCGACGACGCGAACGAGATTATCCGCCTCGAAGCGAACACCGACTAC
TGGGGCGAAGGTCCCAACGTGGACGAAGTCGTCTTCGTCACCATCGGACAGAACTCCACGCGTGCGCAGTCGCTCGCGTC
GGGCGAACTCGATATCGTCGACGGTCTCGGCGCGCAGTCGTCCGTGCAGGTCGAAAACGCGAGTAACGCCGACCTCGTCC
GCACCGAGGGTATCAACATCGGCTACATGGCGTTCAACATGGCGAGTGTGGAGGAGTTCCGCGACAAGCGCGTCCGGCAG
GCAATCAGCCACGCCATCAACACCGAAGCCATCGTCAACGAGATTTACTCCGGCTTCGCGACACAAGCGAGCCAACCGCT
TCCGCCGAACGTCCTCGGCCACAACGACGACCTCGACCCGTACCCGTACGACACCGACAAGGCACAGAGCCTCCTCGAAG
AGGCGGGCTACGGCGACGGCTTCTCGTTCGAACTGGCGACGTTCCAGAACCCCCGCGGGTACAACCCATCGCCGATTCAG
ACCGCAGAGACCGTCGCGTCCAACCTCGGCGAAATCGGCATCGATGTCGAAATCAACCAGCAGTCGTTCAGTCCGTTCCT
CGAATACACCGCACAGGGACGCCACGACGCCTGTTTCCTCGGTTGGTACACCGACAACGCCGACCCGGACAACTTCATGT
ACGTCCTGCTTCACCCGCAGGTGGAAGAAGGAGAACTCACCGAGGGCCAAGACTGGGTCAGCTTCGACGCGGAAGGCTAC
AACACCAGTAACCGCTCCGGCTGGGCGAACAGCGAGTACATGGACCTCATCGAGCAGGGGCAGAGCACCTACGACGAAGC
AGAGCGTGAATCGCTGTACAACCAGGCGAACCAGATTGCGCACGACGAAGCTCCCTGGGTGTATCTCGACTACGCGGACG
AACTCCGCGGTGTTTCAAAGCGTGTCAGCGGGTTCAAAATCGCGGCCATCAGCGGCCCGTACCTCAACCTGGTTAGCCTG
AACTAA
pI
3.9573
MW (k)
53245.3
Translation (482 aa,
Edit
)
>oppA|605|gene dipeptide ABC transporter ATP-binding protein [Haloferax mediterranei ATCC 33500]
MYDTLINFEPGKSTLTQGLATEYTLEGKTASITLREGVKFHNGEEFTAADFVATYRRFVDNSYENYAGDDYVSAYGPFTL
GSWIDEIQVDGDYSMTIKLTQTYAPFLRNLAMFAAAVHSKAAIEEYGTELKKNPVGTGPFKLSNLDDANEIIRLEANTDY
WGEGPNVDEVVFVTIGQNSTRAQSLASGELDIVDGLGAQSSVQVENASNADLVRTEGINIGYMAFNMASVEEFRDKRVRQ
AISHAINTEAIVNEIYSGFATQASQPLPPNVLGHNDDLDPYPYDTDKAQSLLEEAGYGDGFSFELATFQNPRGYNPSPIQ
TAETVASNLGEIGIDVEINQQSFSPFLEYTAQGRHDACFLGWYTDNADPDNFMYVLLHPQVEEGELTEGQDWVSFDAEGY
NTSNRSGWANSEYMDLIEQGQSTYDEAERESLYNQANQIAHDEAPWVYLDYADELRGVSKRVSGFKIAAISGPYLNLVSL
N
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment