The
Haloferax mediterranei
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
HFX_1855
Gene ID
1855
Gene Name
HFX_1855
Annotation
ABC-type dipeptide/oligopeptide/nickel transport systems, ATP-binding protein I & II
Location
chromosome:1784277←1786358
Gene type
Functional gene
GC content
60
Hydropathicity
-0.398701298701299
DNA (2082 bp,
Edit
)
>HFX_1855|1855|1784277|Rev|1786358 Haloferax mediterranei ATCC 33500 chromosome, complete genome
ATGACATTACTCGATATAACAGACCTCAAGGTCACGTACAGTACGAAAAACGGGAAGGTACACGCAGTGAACGACGTGTC
CTTTTCCATCGGTGAAGGCGTCAACTATGGACTCGCCGGCGAATCCGGGTCCGGAAAGTCGACGATAGCCGAGGCCTTGC
TCGGGTTGCTCCCGGACAACGGCCAGATCGAGAGCGGTGAAGTCCTGTTTAAGGGACAGGACCTGACGACGCTCAGTCCC
TCGGAACGTCGTGATATCCTCTGGGAGGATATCGCGTATATCCCCCAGAGTGCGATGGACGCGTTGGACCCCGTGATGTC
CACGGGGGCACAGATCCGCCAGGCAATCCAGAAGCATCGGAACGTCTCGAAGGCGAAGGCCCGCGAACGCGTGAGGGAGT
TGTACGATATCGTCGGGTTAGACCCGAACCGTATCGACGACTATCCACACGAGTTCTCCGGCGGGATGCGTCAGCGCGTC
ACCATCGCGATGGCACTCGCACTCGAACCAGACCTCATCATCGCCGACGAACCCACCACGGGGTTGGACGTTATCGTCCA
GGACAAGATTGTCGACAAAATCCTCGAGATTCAAGAGCGGATGGATAGCTCGCTCTTGCTCATCACTCACGAGATCGGCG
TCATCGCGGAGACGTGTGACGACCTCTCTATCCTCTACGGTGGGAAGGTGATGGAACAGGGGAGCGTTGACAACGTCCTC
ATCAATCCGACGAACCCCTACACGATGGGACTCAAGAACTCCTTCCCGGAAATCGAAGACGGCGGTGACCCTGTCTCGAT
TCCGGGCTCACCGCCAAATCTCAGCCAAGAACCATCGGCCTGCGTGTTCAAGGACCGCTGTCCGTTCTCCACGGCGGAGT
GTGAACAGTCCCATCCCGACCTTGTTGATCTCCCCAACCGGAATCACCAATCAGCCTGCCACCACGTGAAAAAGGCGGCT
CAGATGCGGCGTGACGCCAAGGAGCCCGAAACGTGGGGCATTGCTGACGAAGACGACGGCGACAGCGGGACTGGCGAAGT
CGTCCTCGAGACGCACGACCTCGAAAAGTGGTACGAACAGAGCCAGTCGCTGGTGAGTAAGTTCCGTGGCGAGAACCCCA
ACTACGTCCGAGCAGTCGATGGCGTGTCGTTATCTGTTCGCCGGTCGGAAATCCTCGGCGTCGCTGGCGAGAGTGGCTGC
GGGAAGTCGACGCTGGGAGAGACCATCGCGCTGCTGAAGCAACCAACTGGCGGGAAGATTACCTTCGACGAGAAGTCTCA
CGAGTACTACCAAGACGGGAACATGAAGGAGTTCCGTCGAAAGCTCCAGATTATCTTCCAGGACCCGTTCGACTCGCTGA
ACCCACGTCAAACTGTCCGCCAACTTGTCGGTGAACCGCTCACCATCCACGATTACCGGACAGACGAACGGGAGGTGGCA
ATTAAAGAAACGCTCGAAAAAGTCGGGCTGACACCAGCCACGAAGTTCCTCGACCAGTACCCACACGAGCTATCGGGTGG
ACAGCGCCAGCGGGTTGCCATCGCCAGAGCGCTCGTCGTCGACCCGGACTTCCTCATCTGCGACGAGCCAGCATCGATGC
TCGACGTTTCGCTCAAGGTCAACCTCCTGAACCTGCTTCGGCAACTCGCCGACACCGAAGACATCGGCATCGTCTACATC
TCCCACGACCTGGCGAGCCTGGTGCAGGTGTCCGACCGCCTGGCCATCATGTACCTTGGCCGCGTCGTCGAGACGGGTGA
CGTCGACCGCATCGCGAGACAGCCGAAACATCCTTACACGAACTCGTTGCTGTCGGCCGCACCGGAGAAAGACCCCTCCG
TTGGGCGGACGCGCGTACTGCTGGAGGGTGAACCGCCGGACCCGGTGAACCTCCCGTCCGGGTGTACGTTCGCTCCCCGG
TGTCCGAAAGCCTCGGACGAGTGCTGGCGTGCGGAGCCCGCCCTCACCGAGGCGGGCGATGCGGAACACATGGCGGCGTG
TTACTTTCCGGAAGATGAGGTTGACCAACCAACCGTCGTCGACGAAGCCCGGACGCCCAGCAGTGAGAGCATGAGCGACT
GA
pI
4.4356
MW (k)
76245.7
Translation (694 aa,
Edit
)
>HFX_1855|1855|gene ABC-type dipeptide/oligopeptide/nickel transport systems, ATP-binding protein I & II [Haloferax mediterranei ATCC 33500]
MTLLDITDLKVTYSTKNGKVHAVNDVSFSIGEGVNYGLAGESGSGKSTIAEALLGLLPDNGQIESGEVLFKGQDLTTLSP
SERRDILWEDIAYIPQSAMDALDPVMSTGAQIRQAIQKHRNVSKAKARERVRELYDIVGLDPNRIDDYPHEFSGGMRQRV
TIAMALALEPDLIIADEPTTGLDVIVQDKIVDKILEIQERMDSSLLLITHEIGVIAETCDDLSILYGGKVMEQGSVDNVL
INPTNPYTMGLKNSFPEIEDGGDPVSIPGSPPNLSQEPSACVFKDRCPFSTAECEQSHPDLVDLPNRNHQSACHHVKKAA
QMRRDAKEPETWGIADEDDGDSGTGEVVLETHDLEKWYEQSQSLVSKFRGENPNYVRAVDGVSLSVRRSEILGVAGESGC
GKSTLGETIALLKQPTGGKITFDEKSHEYYQDGNMKEFRRKLQIIFQDPFDSLNPRQTVRQLVGEPLTIHDYRTDEREVA
IKETLEKVGLTPATKFLDQYPHELSGGQRQRVAIARALVVDPDFLICDEPASMLDVSLKVNLLNLLRQLADTEDIGIVYI
SHDLASLVQVSDRLAIMYLGRVVETGDVDRIARQPKHPYTNSLLSAAPEKDPSVGRTRVLLEGEPPDPVNLPSGCTFAPR
CPKASDECWRAEPALTEAGDAEHMAACYFPEDEVDQPTVVDEARTPSSESMSD
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment