The
Haloferax mediterranei
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
mscS
Gene ID
2700
Gene Name
mscS
Annotation
mechanosensitive ion channel
Location
chromosome:2626027←2627100
Gene type
Functional gene
GC content
62
Hydropathicity
0.079831932773109
DNA (1074 bp,
Edit
)
>mscS|2700|2626027|Rev|2627100 Haloferax mediterranei ATCC 33500 chromosome, complete genome
ATGGACGGAGTCGAGGGGGTCGTCAGCATGCGGGATGTTGTCACCGGGACGTTGCTGGCCGACGGGACACATCCCGCGCT
TGTCGCGCTTCAGTCCGGGGCGATGAAACCGCCGGACTTCGTCCCCGAGTATCTGGTGTTCCCCGGATGGCAACTCGTCT
TGGCCGCTCTCGTTCTCGGATTGTCAGTCGGTCTCTCGAAGTACGTCGTTCGCCTACTCGGTCGGCCGGTCGCCCGACAC
TTCCGCCGCCAGAGCGTCGCACAGACGATTCTCAGATTCGTCCGCCTATCCATTATCCTCACGGGTGGCGGCGTCGCCGC
GGGTATTCTCGGTTTCGAACTGGGCAACATCGTCCTCTCGGTGACGGTGTTTTCTGCCGTTCTCGGTATCGTGCTCGCTC
CCATCGTCGGGAGCATCATCAACGGCGTATTCGTCCTCGCGGACCAGCCCTACGAAATCGGCGACATGATCGAACTCGAC
AACGGGACCCGCGGGTTCGTCGAGGAAATCAACCTGCGCTACACGAAGGTGTTCACCCTTGACAACACCTTTCTGGTCAT
GCCGAATTCGAACATCCGCGAGCGCGACGTTACCAACTACTCCGCCGAAGACGAGCGGACGCGCCTGACGCTCGACGTGC
TCGTCACCTACGAATCCGATATCGCGGCCGCCCGCGACCTCGTCGAACGCGCCGCCCGCGACTGCGAGGCAGTTATCGAA
GGCGGTCCGGACATCCGCATCGGGAGCGCCCGGTATCCGGCGAAGCCAACCGCGTATATCGAATCGTACGCGGATAACGG
CGTCCTCCTGCGACTCCGCTACTGGGCGCTGAAACCGTACAAGATGCTCAAGATTCAGTCCGAGGTCCAGACGAGGTTGT
GGTCTCACCTCGAAGACTCCGACGCGAACGTCGAGTTCGCGTACCCGCACACGCACCTCGTCTTCGACGACACGAGCGGG
GCAGTTCGGGTCTCCGGTGGCGACGGTCCCGAAGACCACCGTCACACGGTTGCGTCGCCACCGACTGGACGGACCGACTC
GGTAGAAGCAGCGGATGACGAAGCAGACGAGTAA
pI
4.635
MW (k)
38927.3
Translation (358 aa,
Edit
)
>mscS|2700|gene mechanosensitive ion channel [Haloferax mediterranei ATCC 33500]
MDGVEGVVSMRDVVTGTLLADGTHPALVALQSGAMKPPDFVPEYLVFPGWQLVLAALVLGLSVGLSKYVVRLLGRPVARH
FRRQSVAQTILRFVRLSIILTGGGVAAGILGFELGNIVLSVTVFSAVLGIVLAPIVGSIINGVFVLADQPYEIGDMIELD
NGTRGFVEEINLRYTKVFTLDNTFLVMPNSNIRERDVTNYSAEDERTRLTLDVLVTYESDIAAARDLVERAARDCEAVIE
GGPDIRIGSARYPAKPTAYIESYADNGVLLRLRYWALKPYKMLKIQSEVQTRLWSHLEDSDANVEFAYPHTHLVFDDTSG
AVRVSGGDGPEDHRHTVASPPTGRTDSVEAADDEADE
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment