The
Haloferax mediterranei
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
HFX_2720
Gene ID
2720
Gene Name
HFX_2720
Annotation
AP-endonuclease/AP-lyase / DNA-(apurinic or apyrimidinic site) lyase
Location
chromosome:2646930←2647898
Gene type
Functional gene
GC content
64
Hydropathicity
-0.349689440993789
DNA (969 bp,
Edit
)
>HFX_2720|2720|2646930|Rev|2647898 Haloferax mediterranei ATCC 33500 chromosome, complete genome
ATGTACATCGGTGTGCTCACTGTCCCACTCGGAAACGAATCTCTCGCCGACGCGCTCGACTATCTGTCGGGTATCGGCGT
CGAAGGCGTCGAACTCGGCGTCGGCGGATGGCCCGGCGAAGACCACGTCGACCGAGCGGCCGTCCTCGGTGACGACGAGA
GACAGGCTGCCCTGCTCGCCGCCGTCGAGGAGCGCGAGATGCAAATCAGCGCGCTAGCGACTCACAACAACCCGCTGCAT
CCCGACGAAGAAACAGCCGCCGAGGCGGACGAAGAACTCCGCGAGGCAATCGAACTCGCCAGTGTCCTCGACGTAAACAC
CGTCACGTGTTTCTCCGGCCTCCCGGCAGGCGGCCCGAACGACGAAGTGCCGAACTGGATTACGGCCCCGTGGCCGACCG
AGCACGCCGACGCCCACGAGTACCAGTGGGACGTCGCCATCGACTACTGGTCCGACCTCGCCGAATTCGCCGACGACCAC
GGCGTCGACATGGCCATCGAGATGCACCCGAACATGCTCGTCTACGAACCGACGGGCATGATGCGTCTGCGCGAGGCGAC
CAACGAACGCATCGGTGCGAACTTCGACCCTTCGCACCTCTATTGGCAGGATATCGACGTAACCGAAGCGATTCGCTTCC
TCGGCGACCACGACGCTATCCACCACTTCCACGCGAAGGACACGAAAGTGTACGACCACCACGCGAAGGTCAAGGGTGTC
CTCGACACCACCTCCTACACCGACACCGCCGCCCGCTCGTGGCTCTTCCGCTCGATTGGCTACGGCCACGACGAAGGCCA
CTGGAAGGACGTGGTCTCGACGCTTCGAATGGTCGGCTACGAGGGCGCGCTCTCTATCGAACACGAAGACGCGCTCACCT
CCTCGAACGAGGGACTGGAGAAGGCCGTCGACGTGCTCTCGCGCGCCGTCTTCGAAACGCAACCCGGCGAGGCCTACTGG
GCGGAGTGA
pI
4.1077
MW (k)
35591.1
Translation (323 aa,
Edit
)
>HFX_2720|2720|gene AP-endonuclease/AP-lyase / DNA-(apurinic or apyrimidinic site) lyase [Haloferax mediterranei ATCC 33500]
MYIGVLTVPLGNESLADALDYLSGIGVEGVELGVGGWPGEDHVDRAAVLGDDERQAALLAAVEEREMQISALATHNNPLH
PDEETAAEADEELREAIELASVLDVNTVTCFSGLPAGGPNDEVPNWITAPWPTEHADAHEYQWDVAIDYWSDLAEFADDH
GVDMAIEMHPNMLVYEPTGMMRLREATNERIGANFDPSHLYWQDIDVTEAIRFLGDHDAIHHFHAKDTKVYDHHAKVKGV
LDTTSYTDTAARSWLFRSIGYGHDEGHWKDVVSTLRMVGYEGALSIEHEDALTSSNEGLEKAVDVLSRAVFETQPGEAYW
AE
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment