The
Haloferax mediterranei
Genome
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ysh1
Gene ID
4139
Gene Name
ysh1
Annotation
putative exonuclease of the beta-lactamase fold involved in RNA processing
Location
pHM100:116924→118642
Gene type
Functional gene
GC content
58
Hydropathicity
-0.155244755244755
DNA (1719 bp,
Edit
)
>ysh1|4139|116924|For|118642 Haloferax mediterranei ATCC 33500 plasmid pHM100, complete sequence
ATGGAGATCCAGTTCCAGCACGCAAACCCACGTTCCGGGCGCGAATCCCTGCTCCTACGATTCGATGGGTTGCTCGCTGA
CCAAACGGTCTCTGTACTCATCGACGCTGGGCAGGGTGTGTCGGTCGATACGTTGCTCGACGAGGACGCCAACGAATATC
TCACCGCGATCTGTCTCACGCACGCGCACCTCGATCACTACCAATCACTCGGCGACAATCTGTTGCACGGTGCGCCAGTC
TATGCGGCTGCCGATACCGCAACCATACTGGAAGATGTCTTGGCAGTTGGTGCCGAGCACTACGAACTCTCAAAAACCGA
TGACGTACTCGAACAACTCGAATCGATCGAGGGGTGGACGCAAATCGTCGCTGGGCTCCGTGTTCATCCCGTCCCAGCGG
GCCACACACCCGGTGCCGCAGGGTTTCTCTTTGAGGCAACTGCCGATGACGAACGGCGCACAATTCTCGTGACTGGTGAT
TTCACCACCCGGCGCGTTGCTGGGTATCCCGGGCTCGACCTTGACCTCCCTGTTGATGTCGACACCCTCATTTTGACCGC
GGCCACAAGCGAGGGATTCGAAGCAACACTCACCGATGCTGTCGGGACGATCTGTGAGCGCGTTTGGGCTGGCTCGACTG
TCTTGGCGACAGCCAGTGGGCTGACCGGACTGCACCTTGCGTATCTTCTTGGTCATCTCGCCGACCGATGGGACAGGCGA
CTCCCAATCACGCTCGCTGGACACGTTGCAACACTCTACAACGCACTCGAGTACACAATCCCGAACGTCACATCAGTTCC
CGAGTTTACTGCCCCATCGGAGGTGGTACAGCCCGAAAGCGTGACGATTGCAGGACCGGAGGTTCCGGTTGACGGAAGTG
CCGAGCGGCTCTTTGCGGCGATTACTGACGACCCTGGTGCAACTCTGGTCCAACTCATCAGCGGTGGCCACTCTCCCGTG
ACGAGCACTACGTGTACGACGCATGAGTTCGCTCTCAGCAACCACCCCTCGTCACAAACGATCGACAACGTCGTTGAGAC
GCTCTCACCAACCCACGTGGTCATTACCCACCAGCAAGGGGCCGCTGCGAATCAGTACAAGGATAAGTACGCCAGTTATG
TCTGGGCGACAGACACCACTGACTGTTACACACTCTTAGATGAGACAGGCTGGACACCCCCACCGTGGGTGACGGAGGTG
ACGACACGTCGGGTCCTGTCTGGAACGAATACAATCGGTAGTCAGTTTGGCGAGTCGAGTGTGAACCGAGAGATTCCATT
GCCATCCGTCACACGGGTTGATGAAGTTGACCTCAGTGCAGAAGGGCTCGACCTATCAGCCCTTCGTTCACGGCTCTCGG
TCGGACAGACAGACCAACCACTGGCCGCCGACTTATCACCGCGCCTAAATTCGACAGACGGTCACCCACAGCCAACTGGT
CATGCGAGTTCCAACAGTGTGTCAGACGCTGAGTCGGCCACAAGCGGTGATTCCGACGGAGCCACGCTCGAAAAGATTGC
TGCGCGTCTTGATCGAATCGAGGCTGCAGTGACTGACCAGGGGGTGGATGCTCGCGTGATCGATGCTGGCGATGGCATGG
TCTTGCTTCGCCTTGAGGACCCACCGAACCATCTCAAACATGGCCAGCAACTGCGCGTCACTCTTCCCGCGGAACGATCT
CAAACGAATACCGACACGTCTTCGAACTGTGATTCATAG
pI
4.2193
MW (k)
60870.3
Translation (573 aa,
Edit
)
>ysh1|4139|gene putative exonuclease of the beta-lactamase fold involved in RNA processing [Haloferax mediterranei ATCC 33500]
MEIQFQHANPRSGRESLLLRFDGLLADQTVSVLIDAGQGVSVDTLLDEDANEYLTAICLTHAHLDHYQSLGDNLLHGAPV
YAAADTATILEDVLAVGAEHYELSKTDDVLEQLESIEGWTQIVAGLRVHPVPAGHTPGAAGFLFEATADDERRTILVTGD
FTTRRVAGYPGLDLDLPVDVDTLILTAATSEGFEATLTDAVGTICERVWAGSTVLATASGLTGLHLAYLLGHLADRWDRR
LPITLAGHVATLYNALEYTIPNVTSVPEFTAPSEVVQPESVTIAGPEVPVDGSAERLFAAITDDPGATLVQLISGGHSPV
TSTTCTTHEFALSNHPSSQTIDNVVETLSPTHVVITHQQGAAANQYKDKYASYVWATDTTDCYTLLDETGWTPPPWVTEV
TTRRVLSGTNTIGSQFGESSVNREIPLPSVTRVDEVDLSAEGLDLSALRSRLSVGQTDQPLAADLSPRLNSTDGHPQPTG
HASSNSVSDAESATSGDSDGATLEKIAARLDRIEAAVTDQGVDARVIDAGDGMVLLRLEDPPNHLKHGQQLRVTLPAERS
QTNTDTSSNCDS
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