The
Haloferax mediterranei
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
ugpC3
Gene ID
5025
Gene Name
ugpC3
Annotation
sugar ABC transporter ATP-binding protein
Location
pHM300:25887←27017
Gene type
Functional gene
GC content
56
Hydropathicity
-0.336170212765958
DNA (1131 bp,
Edit
)
>ugpC3|5025|25887|Rev|27017 Haloferax mediterranei ATCC 33500 plasmid pHM300, complete sequence
ATGTCACAGTTAGAGCTGCGTAACCTCCGGAAGGAATTCACCGGAGGGGGCGAGAGCGTCGTTGCGGTCGACGATGTCGA
TTTGACACTTAACGATGGTGAGTTTTTGGTTCTTGTCGGTCCCTCGGGATGCGGTAAGTCGACCACACTTCGAATGATAG
CAGGATTGGAATCGGTCACAAGCGGGGATGTCATCGTCGACGGTGAGTCGATGACGGATTTGGAGCCACGCGAGCGCGAT
ATCGCCATGGTGTTCCAAAATTACGCCCTGTACCCGCACATGACGACCCGAGAGAACATCGGGTTCGGACTGAAGATGAC
GACCGACCTCGACTCCGAAGAACGGAATCGGCAAGTCGAGGATGTCGCCGAGTCGCTGGGTATCGAAGAGCTACTCGACG
ATTATCCGAAAGAGCTGTCCGGCGGGCAACAACAACGCGTCGCGCTCGGCCGTGCAATCATTCGCGATCCCGAAGTGTTC
CTGATGGACGAGCCGCTTTCGAACCTCGATGCCAAGCTTCGGACGCAAATGCGCACAGAACTCAAAGCGCTGCAAGACGA
CCTGAACGTCACGACCGTTTACGTCACTCACGACCAGACCGAGGCGATGACGATGGGCGACCGCATCGCAATTCTGAACC
ACGGAGAACTTCAGCAGGTCGGCACACCGCTTGAGTGCTACCACCAACCGGCCAATAAGTTCGTTGCTGGTTTCATCGGT
GCTCCCTCGATGAACTTCATGGATGTCGCGTCCAAAAACGAGCGGCTCATCCACAAGATGTTCGACTACGAGATCTCCGA
AGCAACCGCCCAAGCGATTGAGGGGTACGACCGTGTGACGTTAGGAATCCGGCCGGAAGACATCCGAATCGTGGATGGTT
CAGATGTCCAAAACCCGATTCCCGCCGAAGTGCACCTCGTAGAACCACTGGGGGACGTGTCACACGTCGCACTGAACATC
GGCAACAAGCGGTTTACGGCCGCCGTTCCAGGTGGTCAGAAGTTCGACCGCGGTGAGGAAGTAACACTACACTTCCCCGA
AGATAGTCTCCATCTGTTCGATGCCACCTCCGGACAGACACTGAAAAATAGTTCGCGGTCGGCCGACGAAGAACCCGTCA
TTCACGCCTGA
pI
4.3025
MW (k)
41502.6
Translation (377 aa,
Edit
)
>ugpC3|5025|gene sugar ABC transporter ATP-binding protein [Haloferax mediterranei ATCC 33500]
MSQLELRNLRKEFTGGGESVVAVDDVDLTLNDGEFLVLVGPSGCGKSTTLRMIAGLESVTSGDVIVDGESMTDLEPRERD
IAMVFQNYALYPHMTTRENIGFGLKMTTDLDSEERNRQVEDVAESLGIEELLDDYPKELSGGQQQRVALGRAIIRDPEVF
LMDEPLSNLDAKLRTQMRTELKALQDDLNVTTVYVTHDQTEAMTMGDRIAILNHGELQQVGTPLECYHQPANKFVAGFIG
APSMNFMDVASKNERLIHKMFDYEISEATAQAIEGYDRVTLGIRPEDIRIVDGSDVQNPIPAEVHLVEPLGDVSHVALNI
GNKRFTAAVPGGQKFDRGEEVTLHFPEDSLHLFDATSGQTLKNSSRSADEEPVIHA
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment