The
Haloferax mediterranei
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
cat2
Gene ID
5213
Gene Name
cat2
Annotation
putative cationic amino acid transport protein
Location
pHM300:231956→234301
Gene type
Functional gene
GC content
60
Hydropathicity
0.391421254801538
DNA (2346 bp,
Edit
)
>cat2|5213|231956|For|234301 Haloferax mediterranei ATCC 33500 plasmid pHM300, complete sequence
ATGGTTGAGCACACGCGGACACTCGATTTCAAAATCGCGTTCGCGATTGGGCTGGGGACGATGATCGCGGCCGGGATTTT
CTCGCTTTCCGGGACGGCTGTATTCCGAATCGGTTCGAGCGCCGTCATCGCGTTCGTCCTCGCAGCACTTGTTGCTGGAA
TCACCGCCGCAGCCTACTCCGAGTTCGCGTCTATCTACTCCGAAAACGGGGGTGGATACCTCTTTTGCTCGCGTACGTTC
GAAGAGTGGGACCGTCTCAAATACGGCGTTGGAATGTCCCTCTTTCTCGGATACACCGGGACGACAGCGTTCTATCTCGC
GACGATGGACGAGTGGTTCTTCCGGTTTATCCTCCCGGAGTCGCTTCAGTCCCTTCCACACGGAAGCGTTGGGATTCTCG
CAGCACTCACACTTGGACTGCTCAACGCCCGCGGGACCGAGGAATCGGGGATTTTCCAGCTTATCGTCACGAGCGCGAAG
GTCGGAGTCCTGTTCGTCTTCATCGGCGGCGCGATTGCGTTTGCCGGACCAGCGGGAGCAACGACAACGTTCGTCACGAA
CATCGAGGCCGAACCAGTCGGCATCGTCTCGGTCGCCGCACTGGCGTTCATCACGTTCTTCGGATTCTCGGCTATCGCCG
CGAGTGCGGGTGAGATTATCGAGCCTCGGAAGACTGTTCCCCGAGCCATCGCCGCGAGCATGATTACCGTCACAGTGCTG
TACGCGCTCGTCATCGTCGCGATGGTGAACGCGCCGGTCGCCCGCGAAGTGCTCGCAGAGGGGGAGACGGCGATGGGGAG
CGTCGCGGCATCCTTCCTCGGGCCGTGGGGGCAGTTACTCATCGTCGCCGGTGCCGTCTTCTCGATGGTAAGCGCCTCGA
ACGCCTCGATTCTCGCCGCGAGCGGTATCGGGTCACTCATGGGCCGACAGGGACACGCGCCCCGGCGGTTCGCCCGCATC
CATCGCGACTATCGGACACCATTCTGGAGTGTGACGACAGCAACGGCGACAATCTGTCTCCTCATCTTCGTGTTCATCAC
CCTCTTTTCGGAGCACGGACTACTCGGCGTCCATTTCCTCGGGTTGAGCCCCCTCACGGGATTCGCTACGTTCAATCTCC
TCGTCCCACTGGCCGTGGTAGATATCGCGCTGATTTACTCCCGGCGGAACTACCCGGACATCGAACGAGGCTTCTCGATG
CCGCTCGTTCCTGCCCTCCCCGTGGTGGGCGTACTAGCCAATCTCGCACTTATTCTGAACCTCCCCCCTATTGGGGTTGG
TATCGGCGCTGCACTCACTGTTGGACTCGTTATCGCCTATCTCGTCTGGGGCGGCGCTCCGCATATCGAAGAACTCGTCG
AGAAGATTGTCTCGACCGGCGCTTCCGGCCAATCAGGTTCCAGCACGACGGCCGCAACGGGTGGTGAGACGGAAGAGAGG
GAACGAGAGCGGTTCCGAGTTCTCGTGGCGCTTGCACGCCCAGAGAGAGCGGTCCCCTACGTACGGCTCGCCGAGACGCT
GAGTCGAGGGGAAGAGGCAGAACCGCTGGTTCAGGTGCTCAACGTCACTCACATCCCGGACCAGACGCCGAACGAGATGG
TCCGCGAAACAGCCCAAGAGCGGGCCGAGCGAATAGAAGCGCTCCTTTCCGAAGCCGACATAGACGTTGAATACACCGTC
GAAGGGCATATCTGCCGAGATATCGCGTTCGACATCCTCCAGACAGCACGGGACGACCAGGCTGATCAGATTCTAATGGG
TTATCCGGAGGAGAACCCGGGAATCACCGAAACCGTCGAATACAACGCTCCGTGCGGAGTGTTCTTCACGAGCAACGTGG
ATGCTATCGACGATTTCTCGACTATCAACGTCGGTGCTGGTGGCGGTCCTCACCACCTCGCGCTGCTGCCAATTGTAAAT
CGACTGGGGCAGCAAGGGGCCAAGGTGCACGTCATTAGCGTCAACCCGAAGCGAGGTGGGACCTCCGAACCGGTCGATGA
AACCGTCTCAGCTCTCACGGGAATCGAATCGCTCCAAGTGCACAACCTGACTGCCGACACGGTTGCCGAGGGACTCGTCT
CGACGTCTATCGGAAACGGTGGGTTCCTGCTCATCGGAGCGACCCGTGACCGTCGGCTCCGACGCTGGGTGTTTGGCAGT
ACGCCCGACCGAACAATCGACCTCGCCCGGTCCTCGGGTGTTCCAGTGCTGATTCACGCGAGTACGAGAGGCGTCTCCGG
CCGAATCGAGGAATACATCTTCCCCATCTACCGGTATCTCCGACGCCATCTCGGGAGACATCGTGCATTCCGTCATATCA
TCGAAACACCCAGCGAGACAGAGTAG
pI
5.3914
MW (k)
83324.8
Translation (782 aa,
Edit
)
>cat2|5213|gene putative cationic amino acid transport protein [Haloferax mediterranei ATCC 33500]
MVEHTRTLDFKIAFAIGLGTMIAAGIFSLSGTAVFRIGSSAVIAFVLAALVAGITAAAYSEFASIYSENGGGYLFCSRTF
EEWDRLKYGVGMSLFLGYTGTTAFYLATMDEWFFRFILPESLQSLPHGSVGILAALTLGLLNARGTEESGIFQLIVTSAK
VGVLFVFIGGAIAFAGPAGATTTFVTNIEAEPVGIVSVAALAFITFFGFSAIAASAGEIIEPRKTVPRAIAASMITVTVL
YALVIVAMVNAPVAREVLAEGETAMGSVAASFLGPWGQLLIVAGAVFSMVSASNASILAASGIGSLMGRQGHAPRRFARI
HRDYRTPFWSVTTATATICLLIFVFITLFSEHGLLGVHFLGLSPLTGFATFNLLVPLAVVDIALIYSRRNYPDIERGFSM
PLVPALPVVGVLANLALILNLPPIGVGIGAALTVGLVIAYLVWGGAPHIEELVEKIVSTGASGQSGSSTTAATGGETEER
ERERFRVLVALARPERAVPYVRLAETLSRGEEAEPLVQVLNVTHIPDQTPNEMVRETAQERAERIEALLSEADIDVEYTV
EGHICRDIAFDILQTARDDQADQILMGYPEENPGITETVEYNAPCGVFFTSNVDAIDDFSTINVGAGGGPHHLALLPIVN
RLGQQGAKVHVISVNPKRGGTSEPVDETVSALTGIESLQVHNLTADTVAEGLVSTSIGNGGFLLIGATRDRRLRRWVFGS
TPDRTIDLARSSGVPVLIHASTRGVSGRIEEYIFPIYRYLRRHLGRHRAFRHIIETPSETE
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment