The
Haloferax mediterranei
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
HFX_6028
Gene ID
6028
Gene Name
HFX_6028
Annotation
putative ABC transporter substrate binding protein
Location
pHM500:27272→28546
Gene type
Functional gene
GC content
56
Hydropathicity
-0.333018867924528
DNA (1275 bp,
Edit
)
>HFX_6028|6028|27272|For|28546 Haloferax mediterranei ATCC 33500 plasmid pHM500, complete sequence
GTGACTGCTGGCGGAGCGATACTAACAGGAAGCCTCCTCCCCGGTTGTCTCGGCACCATCAGAGGCAGGACTGACAGTAT
TTCTATCGCGGCGACCGAAGGGGAAGGGCGGTTGTTCCGAAGACTAACTGACGAGTTTGTTACTGTCGAGACTGGTATCG
AAGTCAACGTCGAATTGAAACCGTACGACGCATTGTACGAACAAAACCGCAAACTACTGGCTGAGAAGCGCGACGAATTC
GACCTCGTATTCATGGACGACCCCTGGTTCCCGAATTTTGCCTCTGACTTGGAACCGATTGTGGAGTATCTCCCGGATGG
AGTCCCCGACGAATACATTCAGACGACGCTCGACATCGCCCACTGGCCGACACCACGGGGCCCGTTGCCCCCTGAAGTAA
GAGATGAAGACCCGACCTTGCGGGGGTTGGTCGTCGTCGGAAATACGCAGATTTTCGTGTACAACGCAGCGTACTTCAAC
CAGGTCGGATACGACCCGCCCGAAACCTATCGGGACGTCCTCGAAGCGGGACGGGCGATAGACGAGATCGACGGCGTCCA
CGGATACGTCATCCGCGGAGCGCAAGGAAATCCGATAGTTACGAACTTCTTTCCGGTCGGGTTCTCGCAGGCCGGGAGCA
TGTTCGATACTGACTGGCGATTCCAGTGGAACTCACAGGACGGTATCGAGGCTCTCAGGTTCTTCGTGAAGGAGTTAGCC
GACATCAGTCCCGCAGACGTCACGAAGTACAACGAAGACGAGGTCGTTACAACACTCGCTCAGGGAACGGCCGCACAGGC
CAGCACTTGGCCTGGTACGGCTTCTCTTGCGATAGAAGACGATAGCCCGGCGACCGGAGACCTCGCATTCACGGTCATAC
CGAGTAACGGCGATGGTCGCAGAGCACCACAGCAGGGAAACTGGATTGTCGGTATCAACTCCTACACGAGTGAGGCGGCG
AAGAAAGCCAGCGGTAAAGTAATACAGTCGTTTGTCTCCAGAGAGGGTCAGGAACGCTACGTCGATATCGGTGGTGTTCC
CTTCCGTCACGACACCTTCGAGAACAACCTCGACGCTCGGCCGTGGATGGAAGCGCTTTACGAGAGCCTGCAGGAAGCCC
GATGGCGTCCGCGGACACCTCTCTGGCCGGTTATCGAGCAAGAACTTGGATTACGGCTTCACAGTGCCCTAGGCGGTCCA
ATCTCTGCTGAGGAAGCGATGAGTAGTGCTGAAACGGAAATCGAGAGCGTACTCAAAAATGCTGGATACTACTGA
pI
4.149
MW (k)
46885.2
Translation (425 aa,
Edit
)
>HFX_6028|6028|gene putative ABC transporter substrate binding protein [Haloferax mediterranei ATCC 33500]
MTAGGAILTGSLLPGCLGTIRGRTDSISIAATEGEGRLFRRLTDEFVTVETGIEVNVELKPYDALYEQNRKLLAEKRDEF
DLVFMDDPWFPNFASDLEPIVEYLPDGVPDEYIQTTLDIAHWPTPRGPLPPEVRDEDPTLRGLVVVGNTQIFVYNAAYFN
QVGYDPPETYRDVLEAGRAIDEIDGVHGYVIRGAQGNPIVTNFFPVGFSQAGSMFDTDWRFQWNSQDGIEALRFFVKELA
DISPADVTKYNEDEVVTTLAQGTAAQASTWPGTASLAIEDDSPATGDLAFTVIPSNGDGRRAPQQGNWIVGINSYTSEAA
KKASGKVIQSFVSREGQERYVDIGGVPFRHDTFENNLDARPWMEALYESLQEARWRPRTPLWPVIEQELGLRLHSALGGP
ISAEEAMSSAETEIESVLKNAGYY
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment