The
Haloferax mediterranei
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
tnp
Gene ID
6160
Gene Name
tnp
Annotation
phage integrase
Location
pHM500:179934→181187
Gene type
Functional gene
GC content
64
Hydropathicity
-0.568824940047961
DNA (1254 bp,
Edit
)
>tnp|6160|179934|For|181187 Haloferax mediterranei ATCC 33500 plasmid pHM500, complete sequence
GTGAACTGGTCTCGGAAGTCACTCGACGAACTGGAAGCGTTCTACTGGGATACCGTCGCGCCAGCGATGGACCGCGAGGG
AATGGACCCGACACGCGACGTGCCCACCTACGAGTGGCTCACCGACCACGGTTGGTCGGGTATCGCCTACGCACTGCGCG
AGAAACACGACCTCACACCGCGAGACTTCTTCGTCGACGTCGTCGGTCTCGGTGAGGACGAATCCGATGCGGGCTACGAG
TGGGGCATCGACGCCGAGGCCACCGTCGAAGCGTTCGAATCCTACCTCGACATGCTCGAATCGCGGCGCGGACTCGCCGA
CTCGACGCTTCCGACCCGTCGAACCCACCTCGCACGGTTCGCCCGCACCTATCGCGACCTCCACGGGACCGCCGACCTGC
TTTCTCGACTGGACGACAGGGACGCCGAACCTGACGAGATCGACCGCTGTCTCAACGTCCTCGACGAGTTCGACGACGAA
CTCGCAACCGACGGGACGAAACTCAAATATCTCCAGACGGTCCGCGCCTTCTACGAGTACCTTGTCGACTTCCGTCGGGC
GCGGTACAACCCCGTCGAGAACGCCGCCAAGCAGTTCCGCTGGGAGCAGGGGCAACCGGACAACCGAACCATGACGGCCG
AGCAGGTCGGCAGGGTGTACGGCGTTGCCGACGACCTCGAAGAACGCCTGCTCGTCCTCGGTCTCGCCGGGTGGGGACTC
CGCCCGAACGAACTCGCATCGCTCGACGCCTCGCAACTCGTCCTCACCGGTGACGACCCGCACATCGCGTTCGAGGAGCG
AAAGAACGGCCCCGGAACGGTCGCGCTGCTCTACGGTGTCGATGCCGTGGCGGCGCGAACCGACGACCTCTCCGACGACG
ACTGGAACGGCGCGCTCTTTCCCTCGTCGCGTTCCTCGACGGGACACATCGCCCGCGAAACGGTCAACCGCCGGTTCAAA
CGCCTCGCTAGCGAGGCGGGCGTGACCGTCGACGGGAAAGTACCCACAGCGAAGCTCTGCCGCCGGTTCTGGTACACGGC
GTATCAGGAAGCAGTCGACGACATGCTGGCGCAGTTGGAGGGTGTCGCCGCCGACCAAGGGTCGAAAAGCGCCAGCGTCG
TCATGTCGAACTACCTTTCAGAGGAGCGCCGCCGGTCGTTCCGCCGGCAGGCGATGCGAGAGAAGTTAGCTGCAGTGTTC
GAATCGGAGGCAGATGGGGTTGAGGTGGGAGCCGAGCAGACGATGGTAAACTGA
pI
4.3849
MW (k)
47090.1
Translation (418 aa,
Edit
)
>tnp|6160|gene phage integrase [Haloferax mediterranei ATCC 33500]
MNWSRKSLDELEAFYWDTVAPAMDREGMDPTRDVPTYEWLTDHGWSGIAYALREKHDLTPRDFFVDVVGLGEDESDAGYE
WGIDAEATVEAFESYLDMLESRRGLADSTLPTRRTHLARFARTYRDLHGTADLLSRLDDRDAEPDEIDRCLNVLDEFDDE
LATDGTKLKYLQTVRAFYEYLVDFRRARYNPVENAAKQFRWEQGQPDNRTMTAEQVGRVYGVADDLEERLLVLGLAGWGL
RPNELASLDASQLVLTGDDPHIAFEERKNGPGTVALLYGVDAVAARTDDLSDDDWNGALFPSSRSSTGHIARETVNRRFK
RLASEAGVTVDGKVPTAKLCRRFWYTAYQEAVDDMLAQLEGVAADQGSKSASVVMSNYLSEERRRSFRRQAMREKLAAVF
ESEADGVEVGAEQTMVN
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment