The
Haloferax mediterranei
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
boa
Gene ID
6455
Gene Name
boa
Annotation
bacterio-opsin activator-like protein
Location
pHM500:463939→466818
Gene type
Functional gene
GC content
58
Hydropathicity
-0.42565172054223
DNA (2880 bp,
Edit
)
>boa|6455|463939|For|466818 Haloferax mediterranei ATCC 33500 plasmid pHM500, complete sequence
GTGATCATCGACCCCGGCGAAGGAATCATCTCGATTGACCAGGGAGGGACTGTTGTCTTCGCGAACCCACCAGTTGAGCG
GCTCTTGGGGCATGACCCAGACACACTAGTTGGCAAGTCTATCGTTCGATTCTTTCCGACGGACCACGACACCCCACTCG
AGACTATCCAACGTGCTGCGACCCCACCCGAGCGACCGCATAGAGCAGTCACTGATAGTTCTCTCGTCCATGCCGAGGGC
CACGAAGTTCCCGTGTCGTTCACCGTGGACGCGACCGACTACGAGCAATCCCGGTTTTTTACTCTGCGAATTCACGAACG
GACTAGACACGGTGAACCGTCACAGTCCCGAGCGAACGTCGGTGAATCCCTCCTCCGGAAAATCTTCGAAGAGAGCAACG
ATGCAATGGTCGTCTTTGACAACGAGCACGACGAGATGGTTGCTTGCAACCCCAGAGCATGTGAGTTGTTTGGATACAAT
CGAGATGACCTCCTGTCGACTGCTCCGTCTGAACTCTACTCGTACGATACGACCACATTTGACCGGTTCGTCGACGAGGT
GTTAGAAGCGGGCACAGCCTGTTCCGACGCCCTCGAACACCGCACCGCCGACGGTTCGACCCTTTCAGTTGAAATTTCGG
CATCGAGAATCGAATTCGAGGGTGACCCACACGTACTCGCCTGCGTTCGGGACATCTCCGGACGGGTTCAGCGAAAGCAG
AAACTAGAGCGGTATCGGACAATGGTGGAAGCAGTCGGTGAGGGGGTGTACGCCGCCGACGAGAACCTCCGGTTCACTCT
CGTCAACGACGGCGCGTGCGAGCTGACGAACTACGACCGAGAGGAACTCATCGGAAGACCGTTGACGGACCTTCTTGCGG
GTGAGGCCGATGATGTCGATCCGGCAGACTACGAGGACCTGCTAGTCAACACCTCATCATCAAGCGAGCCGCTGCGGGTT
GTTGACGCCGAGAGCGCCCGAGAAGCTCGTAAACAGCTCTACCAATCCGACCAAGACGTGATGACTGCTGAGGCACCGAT
CCGAACCAAAAACGGGAACGTCATCCCACTCGAAATTCGGTTCAGCGAACTCCCTGCTGGACCCGATGCGGAGTTCCGTG
GAACGACCGGCGTGCTTATCGATATCTCCGACCGGAAGGAACACAAGCGACAACTCAAGACGCTCAACAAGGCGAGCCGA
GAACTGCCTCAGGCGGAAGACCCTCAGGCCATCGCGAAAGCCGCTCTCGATGCCGTTGAGCAGGTCGTTGGGTTCGACGT
TAGTGGCGTGCGGATGTTTGACGAAGAGACGAACACCCTTACCCCTATCGAGATGACCGACGCTGCCGAGCAACTCATCG
ACTCGCGGCCTGCATTCGAACTCGGCGCTACCCTCGCCGGCCATGCGTACCGCCGAGGCGAAGCGGTGCGTAACGACGAA
ATTGATGGCAGCGAGACCGTCGTTGGGGAGACAAGCGGCGAGACGAGCTTTCACTTCCCACTCGGGGAACACGGAACGTT
GACCGTGTTCGTCCCTTCGGGAACTGAGGTCTCTGAATCCGACATCCAGTTGCTGGAAGTGCTTTCAGCGACCGTTACGG
CCCACCTCAATCGCGCCGAGCGCGAGCACACCATCCAGGAGCAAAAACATGAGTGCCGAAACCAACGTGACCAACTCGAC
ACGCTCAACCGGATTAACATACTCATCCAGGATGTCGTCAGAGAGTTGGTCAAGGCTGGCACGCGCGATGGAATCGAAAA
TCAGGTTTGCCGGCAGTTGGCCGAATCGAACCTCTACCGCAGCGCGTGGATAGCTGAAGTGAACGGGGTCACGGATGGAA
TTCTTATCAAGACGGGTGCAGGCGTCGAAGACGGGTATCTGGATGCAATCGAGCAGATGAAACTGCCCCGGATTGGAAAC
GGAACGGTCAAACAGGCAATCGAGACGGGTGAACTCAGTATCGCACGACTGTACCAAGTCAACAGTAACACGTCGACACC
CGAAGTAGAGCCACCCTCCGAGGGCGAAGTCGAGGTTACCGCAGCCATCCCGTTGCGTTACGGGAACCGAATCTACGGGG
TGCTCGTCGTGGACGCTGCTCGTGAAGACGCCTTCGGGGAACATGCGCAGTCGGGATTGAAAGTCCTCGGGGACGCAATC
GGATTCAGTATCAACGCTCTTCGGAACAGGGAGCTACTCCAGTCAGACGAAATCGTCGAACTCGAGTTCGAGCTCACAGA
TCAGTCGAATCTCCCCGTCTACTTCTCCGAGAAACTCGGCTGTCGCTGTCGACTTGAGGGGACTGCTCCCGCAGAGGACG
GCAATTACCTCTGCTACCTCTGGGCTGACGAGGCGTCGGCCGACACCGTGAGCGAGGTGGCCGAGGACATGGAGACGGTT
ACCCACAGCCGAGTCATCAAAGAGCAGGAAGAGGAGTGTCTGTTCGAAGTAATCAAGACTGAATCGGTCCTGCAGACCAT
GGCCGAAGTCGGTGCAACCGTCCAAAACGCCGTGGCAGAAGACGGGGACGGCACACTCGTTATCGAGACATCCCAGACCA
CGAACCTTCAGGAAGTGATTGAGGCACTCCAGTCGCTCTATCCCACCGTGGAGATAACGGCTAAACGGACGGTCGACCGT
TCGGTTCAGACCGTTACTGACCTCCGTAACACGGCTGAGGACCGTCTCACAGAGAAGCAGAGACAAGCCATAAAAGCCGC
GTACCACGCCGGCTACTACGACTGGCCGCGCGGAAGCACTGCCGAAGAGATAGCCGAGTCGATGGACGTCTCCTCCGCAA
CGCTCCATCAGCACCTCAGACGGGCGACGTGGAAACTCCTGACAACATTCCTTGAAGAGACGCACGACCATCCCGGGTGA
pI
4.2854
MW (k)
106008
Translation (960 aa,
Edit
)
>boa|6455|gene bacterio-opsin activator-like protein [Haloferax mediterranei ATCC 33500]
MIIDPGEGIISIDQGGTVVFANPPVERLLGHDPDTLVGKSIVRFFPTDHDTPLETIQRAATPPERPHRAVTDSSLVHAEG
HEVPVSFTVDATDYEQSRFFTLRIHERTRHGEPSQSRANVGESLLRKIFEESNDAMVVFDNEHDEMVACNPRACELFGYN
RDDLLSTAPSELYSYDTTTFDRFVDEVLEAGTACSDALEHRTADGSTLSVEISASRIEFEGDPHVLACVRDISGRVQRKQ
KLERYRTMVEAVGEGVYAADENLRFTLVNDGACELTNYDREELIGRPLTDLLAGEADDVDPADYEDLLVNTSSSSEPLRV
VDAESAREARKQLYQSDQDVMTAEAPIRTKNGNVIPLEIRFSELPAGPDAEFRGTTGVLIDISDRKEHKRQLKTLNKASR
ELPQAEDPQAIAKAALDAVEQVVGFDVSGVRMFDEETNTLTPIEMTDAAEQLIDSRPAFELGATLAGHAYRRGEAVRNDE
IDGSETVVGETSGETSFHFPLGEHGTLTVFVPSGTEVSESDIQLLEVLSATVTAHLNRAEREHTIQEQKHECRNQRDQLD
TLNRINILIQDVVRELVKAGTRDGIENQVCRQLAESNLYRSAWIAEVNGVTDGILIKTGAGVEDGYLDAIEQMKLPRIGN
GTVKQAIETGELSIARLYQVNSNTSTPEVEPPSEGEVEVTAAIPLRYGNRIYGVLVVDAAREDAFGEHAQSGLKVLGDAI
GFSINALRNRELLQSDEIVELEFELTDQSNLPVYFSEKLGCRCRLEGTAPAEDGNYLCYLWADEASADTVSEVAEDMETV
THSRVIKEQEEECLFEVIKTESVLQTMAEVGATVQNAVAEDGDGTLVIETSQTTNLQEVIEALQSLYPTVEITAKRTVDR
SVQTVTDLRNTAEDRLTEKQRQAIKAAYHAGYYDWPRGSTAEEIAESMDVSSATLHQHLRRATWKLLTTFLEETHDHPG
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment