The
Salarchaeum
sp. JOR-1
Genome
Log in
Haloarchaeal Genomes
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Jor_07780
Gene ID
07780
Gene Name
Jor_07780
Annotation
PKD domain-containing protein
Location
chromosome:1278871←1284588
Gene type
Functional gene
GC content
0.527282266526758
DNA (5718 bp,
Edit
)
>Jor_07780|07780|1278871|Rev|1284588
ATGACAAATGAATGGTTGTGTGGACTCGGCAGCCACCAAGACTTGGTTTCTGGGAACACAATGAACGACAGTAGTTTATC
GGCCTATGGTCGGGTGGCGGTGGTGGGTGTGATGGTAATTGCTGTTGTTGCAGGTGGGACGGGGCAGGTAGCAGCGGCCG
GCGGCAGTGGGGACCTGACGATTAATGTAACGCACGCGAATGGTGACCAGGCCGCTGAGGTGAACGCACTGATCATCTAC
CAAGACGGGACACACTACAAGACCGTCACCAACTATCCCAGTGTAGAGTTGAAATATACGTTCTCGAATCTGCCGACCGG
CCATACCTATACCGTCCATGCCTATATTCACGATCAGTTTGCTGGCTCAACATCCGCAATTACGATCAGCCAGGATGACT
GGTGGACGTGGGGGGATGAAAGTTCGAAATCAGCGACGATTCAGGTTAAAAATCCGATCGAATTTGCGCCGACGATTTAC
TATCAGGATGGCGTGACGCCGCTTAAAGGGGCGACGGTGTACGTCAAGTCCCACGAAGACGATCCGGACGGCAGCGGAAA
GGTCGTCTGGCGGTCTGCAACGACGACTGCGGACGGCACTCTGAATCCATCTCCACTGTGGTTGTATCCAACTGCCGCCA
CTGATCCCGGCTATTACACTGTTGACGTCGTTGTTGATGGTGAGACGGTCGCGAGTAGGCAATTCGACGCGCTCACCAGC
GATTCTAGTCCGAGTATCAGTACTAGTAAATCCGTCCCCACATATGACTTATCGGTTGCAAGTACGACCGGTGGACGCGT
TGAGGAAACCCCGACAGGTGCGGTAAAGACAGGGACGACGGTCTCGGTTACAGCGGAGCCTAACCCTGGATACCGGTTTG
ATCACTGGTCGGGGGATTATCCGTCTGGCCATCAATCGGACCGGTCGATCACCGTGACGATGGATCAAGCTAAATCGGTG
ACAGCACACTTCGACAAACTCGCGGCCGATCTCACTGTTGCTGTTCGGCTTCCGAATGGTGAGCAAGCCAACGACGTGAA
TGGGTTAGTTATCTGGCAGGACGATTTTACTGGTGAGCCCTTCCGAACGATTGAGAACTATCCAACCGTCGACCTGGCTC
ATACAGTTAATTCGCTCCCTGGCGGCCACGACTACAAGGTCGTCGCCTACATCAACGATCAGATGGCAGGATCCACCGGT
TGGATCACAATCCGGGATTCTGCTGTTAGTCGAACAATCCAAGTTGAGGACTCAGTCTGGATCAAACCAACCGTGTACTA
TCAGGATGGAACAACCCCACTTCCAGATGCGACAGTAAAAATCACGTCGCATGAAGGCGTCACGTGGCGCTCTGCCACAA
CCAGCTCAGACGGCACGACAACCCCAAGAAAACTCTGGGTATATCCAACCAACGAGGGGCACTACACTGTCGAAGTCTAC
CACGATGGCAACAAAGTAGCGAGCAAACAGCTGTCCTCGCTTGAGAGCAACCGCGAGCTATCCCTAACCACGAGTGTATC
ACTTCCCACAACTGAGGTCTGGTTCACCGTCTCGAAACAAGGCACAATCGAGGGCTATGCATTCGCTGGCGAACCAATTA
AGGGTGCGACTGTCTCTGTAGCAGGAAAGACAAAACAAACAAATGCGGAAGGGAAAATCAGCTTCCAGCTGCCGATTGGG
ACGCATACGCTCACCGTAACGGCGGACGGCTTCGAGACCGTTACCGACACGATCGACGTCCCCAAAACGGGTAGCTTTGC
AGTGAGCGTCCCAATGACTCGGACCGGCGCGGGCGTGCTCAAACTCGAGGTCGTCAACAAAAACGGAGATCCAATTGCAG
CAAACAAGTATCGTGTCCTCGTCAACGGCACACAGGTAACGCCAAACGCTCAAGGCGAACTCGTACTCGACGAGGGGACC
CACACAGTGGCAATCAAACCGACCGACTTCGGCGCCGAGGAAGGGATCGTTGTGAAGCAAAAGCAGGTGACGATTCAGGG
CCAGAATCGAACGGAGATAACAATCATGCCTATCCGTTCTTCGACAAGTACTGGTCTCACGCATAAGGAAAATCAGACCA
TCAGAAAGTTCATTGGTCCTAACGAAGACGCAATTATTTTCGGCCCAGTTAAATATAAAGAGACATCCTACCTGATCGGA
TATGCCCAACCAGATAAACAGGGAGTAATTCGATATATCAGTAACGAGCCTGCATCGGCTCGTCAACTCTTCACGAGCAT
TTCCGGATGGTCAGCCGCCTTCAATATTCAGAGAACGTTTGTATTCCGTCAAACTCCGTCTGGACTGGAATTCGTTTCAG
CAAAAAAGCAAGCTATAATTCGGAATGTGACGCAGACACAGGCAGCGTTAGCGTGGGCACGTGGTGATATCAATCGACAG
CCACGATACACTGAGTTACATGATCAAATGATACACAGCCCGCGTGCAGATGTCAATTTTTGGTTCCAAAATTTAGTCGG
AAGTACACTTCATAGTCCAGAAGATCGTTACCTAGCATCGCTTCAGGCGATCACCACCACATCAAGGAACTATCAATTAG
TTCCTGAGATTGCAGCCCAAGAGATTATAAAAGCGAAATCAGCTGCAGCATCAGCAAAAACTGCTCTGGATCTCGCAAAG
ACGTACAAAGCGCAGAAGTATGTCAAGGTTGCGGGGAAGAGTGTCAAGTCGAAGTATGTTCGGCAGACGTTGATCCGATA
TGCAGATCAAATAAAGAGGTTAGACACCAGTAAAATCGGCTATGGAGTCGGGCTCGCCAGTCTAGTTCTCTCAATCAGTG
AACATCAGACGTACAAAGATCGTAGAGTGGCGATGTTAAGCCAGCTTCAGACCTACGCACACACTCACCAGGGTGTTTCT
CTGCCTGAAGGGCTAGATCGAGCGATTACCGAACTCGAGATTCAACACGAGAATAGCCGAGCGAAGACAATAGAAGCTAT
TGAACAATGGGCTAAGCAGGATGGGATAACCATCGGGACGATGGCCGCAAAGACAGTCGGTACTAAATTCGGGTCTTGGC
TCGTAACGAAGTCCACGTATGCTGCCTCAGTCAGTTCGTGGGTAACCTCCAGCACAGCGGGCACACTTGCTGCCGGCGCC
GCTTCCCTCGCTAGCACTGCCTTACTAGGCTGGCAGGTTGGTGGACTCTTGACTGGACGTCCTGCGACTTATGCAGCCCT
AATTAAAGCAGAATACTCTCTCAGAATAGCTAACCATATTGATGATATAAGACAAGATATTCAGAATACATACGGAGACA
ATTTGGCGCGAAATAGCGAGATCCCACAAGCAGATATTGCCACGACCTTCCATGCGGCAGCCTATATGGAACAGTTGGCA
CTCGTCTCATACTACCGCCAAGACGCAAATGCAATCGAAAAAAGCATTCTTGGAGAGTACGAATCGTTCCTTAAGTCAAT
CTTTGGAGAGGAGGCCTACGCTCGGGAGAAGAAAAATAGATTCCTCGATCAAGCTGCTCGCGAGAGAACGTTCGCAAAAA
AATTCCAAAGAACAGCAGTATCAAAGGTCTTAGCAAACTACGCCAGCCGTTCCGGAATTCAGGCTAATCTCGAAATAGAC
TCAGAGCCAGCGAAAGAGTATCAAACAAAGGAGAGTGTATCAGTTTCAGTAACAGTTACAAACACTGGACGGAGCAGACA
CCCAGTCTTCGTCGGCTACAGCGTCGTCGGGCCCGACGGTACCAGCTACGACAACCATAACTCGACCGGCAAAACGGTCA
CACTCGCGCCCAGTGAGACGAAACGGATCTCGCTGTCGTGGACCGTCCAGGAAGCCGCACCGACCGGCAAGTACGACGTC
GTGGTCTCCGTCTGGAAAGAAACTAATCGAACGAATCTTCATACGCGACTCGACACAGTTCGTAAACCAGAGGCATTCAG
CGTCGTCACAAACGACGAAGAGAGACTCGCACAACTCACCGAGACGGTCGTCCTCGGTGGGACACAAGTCGATCCGGATA
GCCTTGCCGACGCCGTCCGAATCGAGCGTGGGTTCGCGCACAACACTTCTGTCGAGGTTCGAAAACGTTCGATAACGAAC
TACACGGTCGCCATTTCTGCTCCAGAAAGTGCCTCGAACGTAACAGTGTACCTCCGTCGCGAGGCAATTTCCACGGCGGC
GGATCTCTCGAATCTCACGATGTACTTGGACGGTGAACAACACCCATTCACCGTCAAGGAGTCTGCTGGCCCGGGTGCGA
GTCCGTGGGTAGCATTCAATGTCCCACACTTCTCAACGCGGACGGTGAGTTTCATCGCAGACACAACCTCTTCGGAGCGA
TTCAACTACACCGCAGAGCAAGGGGTTGCAGTCAACGGTGATACCGCATACGTCCTCTCCGATGGTCAAATCCTGAAAAT
CGACTTGGAGACCGACAAAGTTCTCACTGTCTTCCCAGCACCGGATGGCACAAATCAAGGACTTGCGTATGGGAATGGGT
CGCTGTGGTATGCGGATGCCCAGTCAGATGCCTTTGCTGGACAGATTCTGGAGTTGAATCCCTCGACTGGAGAGGTTCGC
TCTCGGATCAATATGGGAGTCGATCCATATGGGCTGGCCTTTGGCAATGGCTCGCTGTGGGTTGCAGAGGTAACGAGCGT
GCCGAATGCAATCCATGAGTATACGCCAACTGGCGACCACGTCCGGCAGTTCGCCATTCGCGGCCCGGGGGAATCTGCCG
GTCCAGCTGGCCTTGCCTACTACAACAATTCGATGTGGGTTGGCACGCATAGTGCCCTCTCTGAACTCACACTGACTGGC
AAGCGAAAACAAACAATACATCGTGACACCGGGTTCACAGGGCTCGCTGGCTCGCCAACAACCCTCTATGGACCAACCAC
AGACGGAACCTTAACCGTGCTCCGAACAACCACCCCGACGAACAATCGGCCCACCGCCGCCTTTACGCGGTCACCAGCCA
ACAGCACGGTCACCGTCGGTGAGTCGGTAACGTTCAATGCGTCCACATCAACCGACACTGATGGAACGATCACCGCCTAT
ACATGGAACTTCGACAACGATACTCGCTCAGAGGCAACCACTGCGGTGACGACCCACACATTCACCAGTCCGGGGACCTA
CCGGGTCACACTAACAGTAACCGATGAAAAGGGGGCCACGACAACAATCCACCGCAGCCTCACTGTCTCCCCGAGTGCTG
AACGGTCGCTGACCCTCACAACACCGCGCGACCACCTCGCACCTACGCCCGGCCACACAATCGTTGTGAATGCCACACTC
ACAAATACCGGGGCAACAAGGTCAACCGGCGAGATCGTATTCACTAACACCACACTTCCGTCAACGTGGATTCACCGTGT
CGCCGGCACCGACCCAACAGCTCAAGACCAATTTGCGGTCATCACCGACGGGCACCAAGTCGTATTCTCAGATATTGACC
CGAATGAGACGGTCAGAGCTACCATGACCATTCAAATCCCAGCCACCAACGCCACTGGCACATACACCACCACCATCCAA
CTCCAACACAACAACACCCAGATCACCGCAACACGAATCACCATCACGGTCACACCGAAAACACCGCTCATCGAACAATA
CGACACAGACGAGAATGGTATCGAAACAACCGAACTACTGGCCGGCATCCATGATTGGCGCCAGAACGCCCTCTCATTAC
AGAACCTCCTCGCTCTCATCCACGCCTGGCAACAATGA
pI
MW (k)
Translation (1906 aa,
Edit
)
>Jor_07780|07780|gene
MTNEWLCGLGSHQDLVSGNTMNDSSLSAYGRVAVVGVMVIAVVAGGTGQVAAAGGSGDLTINVTHANGDQAAEVNALIIY
QDGTHYKTVTNYPSVELKYTFSNLPTGHTYTVHAYIHDQFAGSTSAITISQDDWWTWGDESSKSATIQVKNPIEFAPTIY
YQDGVTPLKGATVYVKSHEDDPDGSGKVVWRSATTTADGTLNPSPLWLYPTAATDPGYYTVDVVVDGETVASRQFDALTS
DSSPSISTSKSVPTYDLSVASTTGGRVEETPTGAVKTGTTVSVTAEPNPGYRFDHWSGDYPSGHQSDRSITVTMDQAKSV
TAHFDKLAADLTVAVRLPNGEQANDVNGLVIWQDDFTGEPFRTIENYPTVDLAHTVNSLPGGHDYKVVAYINDQMAGSTG
WITIRDSAVSRTIQVEDSVWIKPTVYYQDGTTPLPDATVKITSHEGVTWRSATTSSDGTTTPRKLWVYPTNEGHYTVEVY
HDGNKVASKQLSSLESNRELSLTTSVSLPTTEVWFTVSKQGTIEGYAFAGEPIKGATVSVAGKTKQTNAEGKISFQLPIG
THTLTVTADGFETVTDTIDVPKTGSFAVSVPMTRTGAGVLKLEVVNKNGDPIAANKYRVLVNGTQVTPNAQGELVLDEGT
HTVAIKPTDFGAEEGIVVKQKQVTIQGQNRTEITIMPIRSSTSTGLTHKENQTIRKFIGPNEDAIIFGPVKYKETSYLIG
YAQPDKQGVIRYISNEPASARQLFTSISGWSAAFNIQRTFVFRQTPSGLEFVSAKKQAIIRNVTQTQAALAWARGDINRQ
PRYTELHDQMIHSPRADVNFWFQNLVGSTLHSPEDRYLASLQAITTTSRNYQLVPEIAAQEIIKAKSAAASAKTALDLAK
TYKAQKYVKVAGKSVKSKYVRQTLIRYADQIKRLDTSKIGYGVGLASLVLSISEHQTYKDRRVAMLSQLQTYAHTHQGVS
LPEGLDRAITELEIQHENSRAKTIEAIEQWAKQDGITIGTMAAKTVGTKFGSWLVTKSTYAASVSSWVTSSTAGTLAAGA
ASLASTALLGWQVGGLLTGRPATYAALIKAEYSLRIANHIDDIRQDIQNTYGDNLARNSEIPQADIATTFHAAAYMEQLA
LVSYYRQDANAIEKSILGEYESFLKSIFGEEAYAREKKNRFLDQAARERTFAKKFQRTAVSKVLANYASRSGIQANLEID
SEPAKEYQTKESVSVSVTVTNTGRSRHPVFVGYSVVGPDGTSYDNHNSTGKTVTLAPSETKRISLSWTVQEAAPTGKYDV
VVSVWKETNRTNLHTRLDTVRKPEAFSVVTNDEERLAQLTETVVLGGTQVDPDSLADAVRIERGFAHNTSVEVRKRSITN
YTVAISAPESASNVTVYLRREAISTAADLSNLTMYLDGEQHPFTVKESAGPGASPWVAFNVPHFSTRTVSFIADTTSSER
FNYTAEQGVAVNGDTAYVLSDGQILKIDLETDKVLTVFPAPDGTNQGLAYGNGSLWYADAQSDAFAGQILELNPSTGEVR
SRINMGVDPYGLAFGNGSLWVAEVTSVPNAIHEYTPTGDHVRQFAIRGPGESAGPAGLAYYNNSMWVGTHSALSELTLTG
KRKQTIHRDTGFTGLAGSPTTLYGPTTDGTLTVLRTTTPTNNRPTAAFTRSPANSTVTVGESVTFNASTSTDTDGTITAY
TWNFDNDTRSEATTAVTTHTFTSPGTYRVTLTVTDEKGATTTIHRSLTVSPSAERSLTLTTPRDHLAPTPGHTIVVNATL
TNTGATRSTGEIVFTNTTLPSTWIHRVAGTDPTAQDQFAVITDGHQVVFSDIDPNETVRATMTIQIPATNATGTYTTTIQ
LQHNNTQITATRITITVTPKTPLIEQYDTDENGIETTELLAGIHDWRQNALSLQNLLALIHAWQQ*
Set Format
Select format
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GCG
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Phred
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SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
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