The
Halobacterium
sp. NRC-1
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tfbE
Gene ID
6389
Gene Name
tfbE
Annotation
transcription initiation factor IIB
Location
pNRC200:308322←307402
Gene type
Functional gene
GC content
66.232
Hydropathicity
-0.397068403908794
DNA (921 bp,
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)
>tfbE|6389|308322|Rev|307402
atgacgacgagtgaaccctacgagcgtgcgttcgacgaagacatccagcgtggtacaactgagccgtgtcccgagtgtgg
gggcccggtgcgaacgaattcagccgaaacagtttgtgcagattgcggactcatcatcgacgagcagtcgatcgaccgtg
gaccggagtggcaccgcgacgacgccgatacagcaaagcgaacgggtgcaccactcaccccggcccgacacgaccgcgga
ctgtcgacggtgatcggcagcggacaggacgcgagggggactgccctctcgagcgagaagcgtcgacgcctcgcgcggat
gcgtcgcgaacagtcccgtggccgatggcggtccacgaaggagcgcaacctcgggcatggactcacggagattcggcgga
tcgcgagcgcactcggcctcgcggattcagtgcgtgatcaagcctgccagctgttccggacggcacagaacgaacgactg
ctcaaaggccgatcaatcgaggcgatggcggccgcgagcgtcttcggcgcctgccggtgcaacggggagtcgtggctcat
cgacgatgtggcgccgatggcgcaggtcggacagaaccgcgtcgagaacgcctacacggtgctcaacgaagagttggggc
tgccgaccccaccagtcagcctggaccagttcgtcccgcgactcgcgtccgacctcggctgcacggacgttgttcgacgc
cgggcagaggagctcgttgtgcaggccgtcgacgccggcatcacgaccggcgtgcatccatccggattcgccgccgcctg
cctgtacatggcggcgtgtgtccacgacgcgccgttgacgcaagccgatgccgcggcggccgccggggtgaccgtcgaga
cgatcaggagccatcgcgatcggctgctctccatcgtagaatag
pI
6.02
MW (k)
33.26392
Translation (307 aa,
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)
>tfbE|6389|gene
MTTSEPYERAFDEDIQRGTTEPCPECGGPVRTNSAETVCADCGLIIDEQSIDRGPEWHRDDADTAKRTGAPLTPARHDRG
LSTVIGSGQDARGTALSSEKRRRLARMRREQSRGRWRSTKERNLGHGLTEIRRIASALGLADSVRDQACQLFRTAQNERL
LKGRSIEAMAAASVFGACRCNGESWLIDDVAPMAQVGQNRVENAYTVLNEELGLPTPPVSLDQFVPRLASDLGCTDVVRR
RAEELVVQAVDAGITTGVHPSGFAAACLYMAACVHDAPLTQADAAAAAGVTVETIRSHRDRLLSIVE
Set Format
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Comment
The tfbE gene on pNRC200 codes an essential transcription factor which could not be experimentally knocked out. See Coker and DasSarma [BMC Genet. 2007 Sep 24;8:61](https://www.ncbi.nlm.nih.gov/pubmed/17892563).