The
Halobacterium
sp. NRC-1
Genome
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pcn
Gene ID
2256
Gene Name
pcn
Annotation
proliferating-cell nuclear antigen
Location
chromosome:1679308←1678568
Gene type
Functional gene
GC content
64.64
Hydropathicity
-0.0238866396761133
DNA (741 bp,
Edit
)
>pcn|2256|1679308|Rev|1678568
atgttcaaggcgatagtaagcgccgacacgctccaggagacactcgactccgtgagcgtgctggtggacgagtgcaagat
ccacctcgacgacgacaccctctccattcgcgcagtcgaccccgccagcgtcggcatggtcgacctcgatctcgccgcca
ctgcgttcgaatcctatgaagccgacggcggcctcatcggcgtcaatctctcccggctggaggacatcgcgggcatggcc
gacgccggccagctcatccaactggaactcgacgaggaaacccgcaagctccacatccagatcgacggcctcgaatacac
gcttgcgctcatcgaccccgactcgatccgccaggaaccggacatcccggacctcgatctgcccgcgcacgtcgccatcg
aaggccgcgacatcgaccgcgcggtcaccgccgccgacatggtctccgaccacatcgcgctcggcgtcgacaccggcgac
gacctgttctacgtcaacgccgaaggcgacaccgacgacgtccacctcgaactcgcgcccgaccagctcatcgacctcga
cgccggcgacgcccacagcctgttcagcctcgactacctcaaggacatgaacaaggccatcccgacgaccgcggaggtcg
aactcgaactcggcgacgagttccccatcaagctgcacttcgacatcgccgacgcacaaggccacgtcacgtacatgttg
gccccgcgcatccagtccaactga
pI
3.81
MW (k)
26.82349
Translation (247 aa,
Edit
)
>pcn|2256|gene
MFKAIVSADTLQETLDSVSVLVDECKIHLDDDTLSIRAVDPASVGMVDLDLAATAFESYEADGGLIGVNLSRLEDIAGMA
DAGQLIQLELDEETRKLHIQIDGLEYTLALIDPDSIRQEPDIPDLDLPAHVAIEGRDIDRAVTAADMVSDHIALGVDTGD
DLFYVNAEGDTDDVHLELAPDQLIDLDAGDAHSLFSLDYLKDMNKAIPTTAEVELELGDEFPIKLHFDIADAQGHVTYML
APRIQSN
Set Format
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Phred
plain text
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tab-delimited
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Comment
pcn, on the large chromosome, codes for the Halobacterium sp. NRC-1 processivity clamp protein similar to the eukaryotic PCNA. The PCN gene is considered essential due to the inability to knock out the gene without the presence of a rescue plasmid containing the wild-type gene in trans. See Berquist et al. [BMC Genet. 2007 Jun 8;8:31](https://www.ncbi.nlm.nih.gov/pubmed/17559652).
