The
Halobacterium
sp. NRC-1
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Sequence Retrieval
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
appF
Gene ID
2365
Gene Name
appF
Annotation
oligopeptide ABC transporter ATP-binding
Location
chromosome:1770599→1771918
Gene type
Functional gene
GC content
69.09
Hydropathicity
-0.331818181818182
DNA (1320 bp,
Edit
)
>appF|2365|1770599|For|1771918
atgagcaagcagatcgtgaacacggagtcggacgccgcggaatcgttgatgcgagtggacggcctcaagaagcattaccc
gatcacggagggcgtactgcggacggaggtcggacgggttcgcgcagtggacggggtgtcgttcgaggtgcgggcgggcg
aaaccctggggatcgtgggggagtcggggtgtgggaagtcgacggtggcggagtccgtgctccggctcacggacccgacc
gccggcagcgtctacttcgacggggaagacgtcaccgcgtacgacgacacggcgttgaagcggttccggcgggaggccca
gatgatcttccagaacccggattcgagcttcgacccgcggatgaccaccggcgagtcggtcgccgagccgctcaagatcc
acggcgtggggccacgcagccggcgcttggagatcgcgcgggatctcctcgaacgcgttggaatgagcggtgaggacgcc
gcccggtatcctcacgagctgtccggcggccagaagcaacgggttgcgctcgcccgggcgctggtggtcaacccgcgact
catcgtcgccgacgagccggtgtcggcgctcgacgtgagcgtgcaggcggaggtgttgacgctgttgaacgacatccagg
cggagttcaacctgggggtgctgttcatcagccacgacatgggggtggtgcgcgaggtgtgcgatcgggttgcggtgatg
tacctgggtgagatcgtggagatggggcggaccgaggacgtgttcaacgaccccgaacacccctacacgcgggcgctgct
tcggtcgattccgacggtcggggtggagtcccgggggaccgatgcggggcttcgtggggaggtcccgccgccgtccgatc
cgccgacgggctgtaacttccacacgcggtgtccggaggtgatccagcccgacggctacgacttcgagcaggcgcattgg
cgcggcgtgatgaacctccgggttgcggtggagcgccacggcgtcgacgttgcggggcttcgggcgttcgtcggcgtgga
ggacgacgcgtcggtgtcgccggcggacgctgacgcgatgaaggcggagctgcgccgcgagcacgacatccccgagacgc
tcaccgatccgtcggcggaggccacccttgaggcggcgctggacgacatcgtgcgcggcgacgtcgaggacgggcgggcg
gtgctcgccgaggagttcgagaccgtctgcgaaggggagtcgccgccgttggacgaggatgggacggggcggccaaccgc
atgccaccgcgacggcgcggcggcacgaggaggggacgactag
pI
4.45
MW (k)
47.6407
Translation (440 aa,
Edit
)
>appF|2365|gene
MSKQIVNTESDAAESLMRVDGLKKHYPITEGVLRTEVGRVRAVDGVSFEVRAGETLGIVGESGCGKSTVAESVLRLTDPT
AGSVYFDGEDVTAYDDTALKRFRREAQMIFQNPDSSFDPRMTTGESVAEPLKIHGVGPRSRRLEIARDLLERVGMSGEDA
ARYPHELSGGQKQRVALARALVVNPRLIVADEPVSALDVSVQAEVLTLLNDIQAEFNLGVLFISHDMGVVREVCDRVAVM
YLGEIVEMGRTEDVFNDPEHPYTRALLRSIPTVGVESRGTDAGLRGEVPPPSDPPTGCNFHTRCPEVIQPDGYDFEQAHW
RGVMNLRVAVERHGVDVAGLRAFVGVEDDASVSPADADAMKAELRREHDIPETLTDPSAEATLEAALDDIVRGDVEDGRA
VLAEEFETVCEGESPPLDEDGTGRPTACHRDGAAARGGDD
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment