The
Halobacterium
sp. NRC-1
Genome
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polD1
Gene ID
2417
Gene Name
polD1
Annotation
DNA polymerase type II small chain
Location
chromosome:1811590→1812765
Gene type
Functional gene
GC content
67.18
Hydropathicity
-0.167091836734694
DNA (1176 bp,
Edit
)
>polD1|2417|1811590|For|1812765
atgacgggcgcgtccacgggaaccggcgagtaccaggacttcgtgtcggtgttccgcgaccggtacgaccgcctcgccgc
acagcttcggggtcgcgtcaaccaccggccgaccagcgcgctcgcctcgatgcccgggggcagtgacgccgccatcgtcg
gcatggtcaacgacatccggtcgaccaccagcggccattggcgcgtcgagttggaggacaccaacggcgtcttcccggtg
ctcgtgttgaaagaccgcgacgtctcggatctcgtcgacgacctcctgttggacgaggtgatcgccgtgtcgggcacgct
ggctgacgacggcaccatcctcttcgccgacgacatctacttcccggaggttccccgcacgtactcgccgagcaccgccg
accgcagcgtgcaggccgcgctcatctccgacgtgcacgtcggcagccaggagttcgccgccgacgcctggcggtcgttc
gccgactggctgcacacgcccgccgccgagtccgtggagtacctgctcatcgccggcgacatggttgagggcgtcggcgt
ctacccgggacaagacgaggaactcgacatcgtcgacatctacgaccagtacgagacgttcgccgaacacctcaaagacg
tgcccggggacatggagatcgtgatgattccgggcaaccacgacgccgtccggctcgccgaaccgcagccggcgttcgac
gaggagctgcggtcgatcatgcgcgcccacgacgcccgcatcaccagcaacccgtcgacggtcaccatcgacggcgtctc
ggtgctgttgtaccacggagtgtccctggacgaggtgatcgccgaacaccccagcgacgacgtcacctacgacgaccccc
agaacgcgatggagctcctcctgaaaaagcgccacgtcgccccgccgttcggcggccgcacccggctcgcgcccgaggcc
gaggaccacctcgccatcgacaccgttccggacgtgttccacactggacacgtccacaagctcggcgtcggcatccacca
caacgtccggctggtcaactccgggtgctggcaacaccagacggcgttccaggagtcggtgaacatctcgccggacgtcg
ccaccgcccccatcctggatctggacaccctcgacatcacggtgcacaagttctcgtag
E.C.#
2.7.7.7
pI
4.34
MW (k)
42.93938
Translation (392 aa,
Edit
)
>polD1|2417|gene
MTGASTGTGEYQDFVSVFRDRYDRLAAQLRGRVNHRPTSALASMPGGSDAAIVGMVNDIRSTTSGHWRVELEDTNGVFPV
LVLKDRDVSDLVDDLLLDEVIAVSGTLADDGTILFADDIYFPEVPRTYSPSTADRSVQAALISDVHVGSQEFAADAWRSF
ADWLHTPAAESVEYLLIAGDMVEGVGVYPGQDEELDIVDIYDQYETFAEHLKDVPGDMEIVMIPGNHDAVRLAEPQPAFD
EELRSIMRAHDARITSNPSTVTIDGVSVLLYHGVSLDEVIAEHPSDDVTYDDPQNAMELLLKKRHVAPPFGGRTRLAPEA
EDHLAIDTVPDVFHTGHVHKLGVGIHHNVRLVNSGCWQHQTAFQESVNISPDVATAPILDLDTLDITVHKFS
Set Format
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Comment
polD1 encodes the small subunit of the heterodimeric euryarchaeal specific D family DNA polymerase on the large chromosome. This polymerase is thought to act at the lagging strand and the polD1 gene has been determined to be essential. See Berquist et al. [BMC Genet. 2007 Jun 8;8:31](https://www.ncbi.nlm.nih.gov/pubmed/17559652).
