The Halobacterium sp. NRC-1 Genome

Loading
Loading...

rpoA

Gene ID2664
Gene NamerpoA
AnnotationDNA-directed RNA polymerase subunit A
Locationchromosome:1998659←1995747
Gene typeFunctional gene
GC content66.22
Hydropathicity-0.56982492276004
DNA (2913 bp, Edit)>rpoA|2664|1998659|Rev|1995747
atgagtgcaggacaagcccccaaggaaatcggcgaaatcagcttcgggctgatggacccagaggagtaccgcgacatgtc
cgccacgaaggtcatcacggcggacacgtacgacgacgacggcttcccgatcgacatggggctgatggacccccggctgg
gcgtcatcgatccgggcctggagtgcaagacgtgtgggcagcgctcgggcggctgcaacggccacttcggccacatcgag
ctcgcggccccggtgattcacgtggggttctcgaagctcatccgccggctcctgcgtgggacgtgtcgggagtgcgcgag
cctgctgctcaccgaggaggagaaagacgagtaccgggagaacctcgatcggacgcggagcctccgccaggacgtctctg
acgtgatgacggcggcgatccgtgaggcccgcaagaaagaccactgcccgcactgcggggaggtccagtacgacgtcaaa
cacgagaagccgacgacgtactacgaggtccagcaggtgttggcgtcggattacagcgagcgcatcgcggcgtcgatgca
gcccgatgaggacgaggacgacgctggcgtgagcccccaggagctcgccgagcagaccgacatcgacatcagccggatca
acgagatcctctccggggagttccggccgcgccgcgaggaccgtgaggccatcgagacggccatcggcgcggacctcacc
accgaggacatgaacaagctgatgccgtcggacatccgggactggttcgaggacatccccggcgaggacctcgaagcgct
gggcgtgaactcggaccgcagtcggcccgagtggatgatcctgacggtgctaccggtgccgccggtgacggcgcgaccgt
cgatcacgcttgacaacggccagcgcagcgaggacgacctcacgcacaagctggtggacatcatccgcatcaaccagcgg
ttcatggagaaccgcgaggcgggtgcgccacagctcatcatcgaggacctctgggagctgttgcagtaccacgtcacgac
gttcatggacaacgagatcagcgggacgccgccggcgcgacaccggtccggccgcccgctgaagacgctatcccagcgcc
tcaagggcaaagaggggcggttccgcggcagcctctcggggaaacgcgtgaacttctccgcccggaccgtcatctcgccg
gaccccacgctgtcgctgaacgaggtcggggtgccggatcgggtggcgacggagatgacacagacgatggtcgtcaacga
gcagaacctcgagcgcgcccgacgctacgtccggaacggccccgaggggcatccgggcgcgaactacgtcacccggcccg
acggccgtcgcgtgcgcgtcaccgagaaggtgtgtgaggagctcgccgagcgcgtcgagcccggctgggaggtccagcgc
cacctcatcgacggcgacatcatcatcttcaaccggcagccgtcgctgcaccggatgtcgatcatggcccacgaggtcgt
ggtgatgccgtacaagacgttccgcctgaatacggtcgtctgtccgccgtacaacgccgacttcgacggcgacgagatga
acatgcacgccctccagaacgaggaggcgcgggccgaggcgcgcgtgctgatgcgcgtccaagagcagatcctctccccg
cggttcggggagaacatcatcggcgcgatccaggaccacatctccgggacgtacctgctcacgaacgacaatccgcggtt
caacgagacgcaggcgtcggacctgctccggcagacccggatcgacgagctgccggcggccgccggcaccgacgaggacg
gcgaccagtactggaccggccaccagatcttctccgagttgctgcccgacgacctctcgcttgagttcaccggcacgacc
ggtgacacggtcgtcatcgaggacggccagctcttggagggcaccatcgccgacgacgaggtcggagagtacggcagtga
gatcgtggacaccatcacgaaagtccacgggaacacgcgcgcccgcatcttcatcaacgaggtcgcgtcgctggcgatgc
ggtcgatcatgcacttcgggttctcgatcggcatcgacgacgagacggtgtcgacggaggcccgcgagcgcatcgacgag
gcgatccagtcggcgtacgaccgcgtgcaggaactcatcgagacctacgagaacggggacctagagagcctgcccggccg
cacggtcgacgagaccctggagatgaagatcatgcagacgctcggaaaggctcgggactccgcgggggacgtcgccgagg
agaacttcgacgaggacaaccccgcggtcgtgatggcgaactccggcgcgcgtgggtcgatgttgaacctcacgcagatg
gcggggtgtgtcggccagcaggcggttcgtggcgagcgcatcaaccgcggctacgaggaccgcacgctctcccatttcgc
gcccaacgacctctccagtgaggcccatggcttcgtggagaactcctacaccagcgggctgaccccgaaggagttcttct
tccacgcgatggggggccgcgaggggctggttgacacggcagtccggacgtcgaagtccggctacctgcagcgccggctg
atcaacgcgctgtcggagctggagacgcagtacgacggcaccgtgcgggacaccagcgacacgatcgtgcagttcgagtt
cggggaggacggcaccagtccggtgcaggtgtcctccaacgaggaggtcgacatcgacgtcgagcacgtcgccgaccgca
tcctgaactcggagttcgacagcgacacccagaaggccgagttcctggaggtcgaggagccgccgacgaacctctccgag
cacggcgccgcctgggaggtggaatcggatgactga
E.C.#2.7.7.6
pI4.4
MW (k)108.7327
Translation (971 aa, Edit)>rpoA|2664|gene
MSAGQAPKEIGEISFGLMDPEEYRDMSATKVITADTYDDDGFPIDMGLMDPRLGVIDPGLECKTCGQRSGGCNGHFGHIE
LAAPVIHVGFSKLIRRLLRGTCRECASLLLTEEEKDEYRENLDRTRSLRQDVSDVMTAAIREARKKDHCPHCGEVQYDVK
HEKPTTYYEVQQVLASDYSERIAASMQPDEDEDDAGVSPQELAEQTDIDISRINEILSGEFRPRREDREAIETAIGADLT
TEDMNKLMPSDIRDWFEDIPGEDLEALGVNSDRSRPEWMILTVLPVPPVTARPSITLDNGQRSEDDLTHKLVDIIRINQR
FMENREAGAPQLIIEDLWELLQYHVTTFMDNEISGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISP
DPTLSLNEVGVPDRVATEMTQTMVVNEQNLERARRYVRNGPEGHPGANYVTRPDGRRVRVTEKVCEELAERVEPGWEVQR
HLIDGDIIIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTVVCPPYNADFDGDEMNMHALQNEEARAEARVLMRVQEQILSP
RFGENIIGAIQDHISGTYLLTNDNPRFNETQASDLLRQTRIDELPAAAGTDEDGDQYWTGHQIFSELLPDDLSLEFTGTT
GDTVVIEDGQLLEGTIADDEVGEYGSEIVDTITKVHGNTRARIFINEVASLAMRSIMHFGFSIGIDDETVSTEARERIDE
AIQSAYDRVQELIETYENGDLESLPGRTVDETLEMKIMQTLGKARDSAGDVAEENFDEDNPAVVMANSGARGSMLNLTQM
AGCVGQQAVRGERINRGYEDRTLSHFAPNDLSSEAHGFVENSYTSGLTPKEFFFHAMGGREGLVDTAVRTSKSGYLQRRL
INALSELETQYDGTVRDTSDTIVQFEFGEDGTSPVQVSSNEEVDIDVEHVADRILNSEFDSDTQKAEFLEVEEPPTNLSE
HGAAWEVESDD
corresponds to rpoA' in other haloarchaeal genomes