The
Halobacterium
R1
Genome
Log in
Haloarchaeal Genomes
DasSarma Home
UMB
Search
Gene Table
Genome Map
Transcriptome Map
Transcriptome Query
Transcriptome Plot
Metabolism
Genome Comparator
Comparative Genomics
Blast Genome
Blast Proteome
Sequence Editor
Publications
Resources
Loading
Loading...
ugpA
Gene ID
5168
Gene Name
ugpA
Annotation
ABC-type transport system permease protein (probable substrate glycerol-3-phosphate)
Location
pR400:97977→98870
Gene type
Functional gene
GC content
0.618568232662192
Hydropathicity
0.836363636363638
DNA (894 bp,
Edit
)
>ugpA|5168|97977|For|98870
ATGTCCACACAGCCAACCCCATTCGATTCGACACTGCAGGCCCTGGGACTGCTGCTCCCCTCCGTGGTCGTGCTCGGTGC
GTTCCTCTACTATCCGGGCCTCGAGACGTTCCGACTCAGCCTGTACAGAACCCTGTTCCTCGGGCAGCAGACCGCCTGGG
TCGGCGCGGAGAACTTCGTTCAGCTGCTGACCTCAACCGCCTACCACCACAGCTTCGCGATCTCTGTCCTGTTCGCAGCC
ATCGTCGTCACCGGAACCCTCCTGCTGTCGATCGCGGTCGGATATCTCCTCTTCACCGTGTCCGTCGGTTCGTCGGCGTA
CCTCATCGCCGCCATCTGGCCGTACGCGCTGCCGCCGGCCGTCGCCGCGATCCTGTTGAACTTCATCCTACACCCGAACC
TCGGTGTGTTCACCCACTACCTCGAAGCGGTCACCCCGTTCACCTTAGACTGGTTCAACAGCGGCCCGCAGGCGTTCACC
GTCGTCGCCGTCGTCGCGATCTGGAAGCAGCTCGGATACAACATCATCTTCGTCGTTGCCGCGTTCAACACGATCCCCAA
AACGCTCACCGAACGCGCCACGCTCGACGGGGTTGGCCACCTCAGACGCCTCCGGAGCGTCTACCTCCCGCTGATGGCAC
CAACGCTGGTCTTCCTCACGGTGATGAACACGATCTACGCGTTCTTCTCCACGTTCCCGATCGTGGACCTCCTCACCAGC
GGCGGTCCGGGCGACGCAACCAATCTCCTGATATTCAAGCTCTACCGCGACGCCTTCGAGTTCAACAGCCTGGGCTTGGC
GTCGGCCGAGTCAGTCATCCTGTTCGCCCTGGTCGCGGTACTGATGTACGTCCAAATCCGCGTTTCAGAGGGATACGCAC
AGTATGGGGCGTGA
pI
0
MW (k)
0
Translation (298 aa,
Edit
)
>ugpA|5168|gene
MSTQPTPFDSTLQALGLLLPSVVVLGAFLYYPGLETFRLSLYRTLFLGQQTAWVGAENFVQLLTSTAYHHSFAISVLFAA
IVVTGTLLLSIAVGYLLFTVSVGSSAYLIAAIWPYALPPAVAAILLNFILHPNLGVFTHYLEAVTPFTLDWFNSGPQAFT
VVAVVAIWKQLGYNIIFVVAAFNTIPKTLTERATLDGVGHLRRLRSVYLPLMAPTLVFLTVMNTIYAFFSTFPIVDLLTS
GGPGDATNLLIFKLYRDAFEFNSLGLASAESVILFALVAVLMYVQIRVSEGYAQYGA
Set Format
Select format
Ace database
BSML
EMBL database
FASTA
GAME XML
GCG
GenBank
Phred
PIR database
Phred
plain text
SwissProt
tab-delimited
TIGR XML
NCBI TinySeq XML
Comment