| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3873 | HQ1794A | NP0204A | Hut1007 | VNG1755 | rrnAC1902 | Hmu2180 | Hut0029 | rrnAC0321 | Hmu2513 | NP4764A | VNG1684 | hla1352 | HVO_2528 | Hbo2332 | HQ2863A |
| 2499 | HQ1794A | 4096 | 2412 | 2152 | 2169 | 2313 | 2259 | 2120 | 2138 | 2144 | 2289 | 2253 | 2225 | 2239 | 2185 | 2221 |
| 2586 | NP0204A | 2412 | 3989 | 2202 | 2244 | 2429 | 2345 | 2094 | 2347 | 2285 | 2283 | 2264 | 2284 | 2184 | 2241 | 2221 |
| 2592 | Hut1007 | 2152 | 2202 | 4123 | 2200 | 2308 | 2229 | 2145 | 2389 | 2276 | 2305 | 2265 | 2319 | 2336 | 2279 | 2303 |
| 2465 | VNG1755 | 2169 | 2244 | 2200 | 4211 | 2895 | 2771 | 2006 | 2167 | 2051 | 2189 | 2198 | 2140 | 2228 | 2133 | 2154 |
| 2709 | rrnAC1902 | 2313 | 2429 | 2308 | 2895 | 3975 | 3085 | 2108 | 2301 | 2273 | 2378 | 2473 | 2375 | 2451 | 2339 | 2395 |
| 2634 | Hmu2180 | 2259 | 2345 | 2229 | 2771 | 3085 | 3965 | 2103 | 2305 | 2272 | 2316 | 2312 | 2290 | 2287 | 2194 | 2224 |
| 2904 | Hut0029 | 2120 | 2094 | 2145 | 2006 | 2108 | 2103 | 4035 | 2713 | 2761 | 2646 | 2511 | 2578 | 2559 | 2467 | 2508 |
| 3094 | rrnAC0321 | 2138 | 2347 | 2389 | 2167 | 2301 | 2305 | 2713 | 3885 | 3151 | 2813 | 2656 | 2747 | 2737 | 2707 | 2720 |
| 3080 | Hmu2513 | 2144 | 2285 | 2276 | 2051 | 2273 | 2272 | 2761 | 3151 | 3921 | 2820 | 2645 | 2761 | 2753 | 2674 | 2615 |
| 3115 | NP4764A | 2289 | 2283 | 2305 | 2189 | 2378 | 2316 | 2646 | 2813 | 2820 | 3859 | 2745 | 2842 | 2768 | 2657 | 2689 |
| 3131 | VNG1684 | 2253 | 2264 | 2265 | 2198 | 2473 | 2312 | 2511 | 2656 | 2645 | 2745 | 4009 | 2865 | 2968 | 2834 | 2825 |
| 3193 | hla1352 | 2225 | 2284 | 2319 | 2140 | 2375 | 2290 | 2578 | 2747 | 2761 | 2842 | 2865 | 3910 | 3094 | 2962 | 2908 |
| 3213 | HVO_2528 | 2239 | 2184 | 2336 | 2228 | 2451 | 2287 | 2559 | 2737 | 2753 | 2768 | 2968 | 3094 | 3916 | 3208 | 3117 |
| 3115 | Hbo2332 | 2185 | 2241 | 2279 | 2133 | 2339 | 2194 | 2467 | 2707 | 2674 | 2657 | 2834 | 2962 | 3208 | 3923 | 3288 |
| 3089 | HQ2863A | 2221 | 2221 | 2303 | 2154 | 2395 | 2224 | 2508 | 2720 | 2615 | 2689 | 2825 | 2908 | 3117 | 3288 | 3916 |
565 symbols consensus -------------------MSSLSGE-SVTVVGGGFGGLSAACYLADAGADVTLLEKNEQ #oth 11222212233234665437693446333411.2.21..11.12.231124.321.2423 HQ1794A ::MSISPISPSASLEKHSMTHT::ET::TI:I::::S:::T::::::::V:::I::RQDT NP0204A :::::::::MPATDTTQHARCP:D:Q::A::::::::::A:::H::AD::E:R:::QHDR Hut1007 ::::::::::::::MTGNAAG::A:R:::D:I:::I::::::AF:::::::::V:::QPR VNG1755 MPHQSQPGFLLPAIQHHSMQG::P::RD:::::::::::A::A:::R:::S:::::QHDT rrnAC1902 ::::::::::::::::::MRDG:PRDLT::::::::::::::::::N:::::Q:::RYDR Hmu2180 ::::::::::::::::::MQ:RR::DPT:::I::::::::::A::GR::L::R:::RHDR Hut0029 ::::::::::::::::::::T:STDF:D::I::::::::::::H:::::V:::IV::::A rrnAC0321 :::::::::::::::::::::D:::::D:::::::I::::::::::::D:N:S::::::: Hmu2513 :::::::::::::::::::::D::D::EIV:::::V:::::::F:::::::::::::::: NP4764A :::::::::::::::::::--MS:TR:::V:::S:::::::::::::::L:::V:::::: VNG1684 ::::::::::::::::::::DE:A:T:::A:I:A::::::T::::::::::::VV::TD: hla1352 :::::::::::::MDVAPDIDAVA:::::V:I::::::::T::::::::::::::::::: HVO_2528 :::::::::::::MNSVSALD::A:::::V::::::::::T::::::::::::::::::: Hbo2332 :::::::::::::MNAVSDL:V:D:T:::V::::::::::T:::::::::T::V:::::: HQ2863A :::::::::::::MNTVSDL:DVD:S:::V:I::::::::T::::S:::::::V:::::: consensus LGGRASRLERDGFRFDMGPSWYLMPDVFERFFAHFDREPSDYYELERLDPHYRVFFK--- #oth 2..3.231.32..31.1........21..2..541145.621.5.21...2..1112121 HQ1794A :::V:G:I::S::Q::T:::::::::::::::NELGYD:TE::S:T::::N::::W:::: NP0204A :::V:G:I:T::::I:T::::::::GA:::::G:::::::AF:D:::::::::::W:::: Hut1007 :::A:NL::T::::::T:::::::::::::::DQ:::V:EE::T:QK:::Q:::::RDSE VNG1755 V::::GV:::::::::T:::::::::::::::D:::HD:H:F:::T::::Q::::WT::: rrnAC1902 :::H:GV:::::::::T:::::::::::::::K::::::A::::::::::Q::::W:::: Hmu2180 V::H:GV:::::::::T::::::::::::::::::::::G::::::::::Q:::CW:::: Hut0029 V::::::::::::V:::::::::::E::::::E::GH::E:::::::::::::I:::DNE rrnAC0321 :::::::::V:::::::::::::::::::::::Y:GK::R:::D:Q:::::::::::::: Hmu2513 :::::::::AE::::::::::::::::::::::::::::G:::D:::::::::I:::::: NP4764A ::::::V::TE:::::::::::::::::::::D::::::G:F:K:::::::::I:W:::: VNG1684 I:::::T::::::::::::::::::::::E:::S::SH:::::G:T:::::::I:::DNE hla1352 :::::::::A::::::::::::::::::::::G::G::::EF:::::::::::::W:::: HVO_2528 ::::::T::::::::::::::::::::::::::Y:GKR:E:::::T:::::::I:::::: Hbo2332 :::::::::::::::::::::::::::::D::GY:::T:::::::T:::::::I:::::: HQ2863A :::::::::V:::K::::::::::::::::::NY::::::E::::T:::::::I:::::: consensus ---------------DGDRVDVTPDREQNRELFESYEPGAGEAFDAYLATAERNYEVGME #oth 33333333323322222.63436314455454.24..4.1144135..561463.25212 HQ1794A ::::::::::::::::::TAILPA:::GQ:::::Q::S:::A:L:T::EQ:ADA::I::: NP0204A ::::::::::::::::::::::PD:P:AVA::::R::::::N::R:::DS::HA::::VD Hut1007 PVPGAGTPYDEDVDAPC:W:T:::::N:IKRI:AA::A:G::::EE:::E::HT:D:::: VNG1755 ::::::::::::::::::SATIE:N:RNAH:::::::E:::D:LAT::DR:AT::DLA:N rrnAC1902 ::::::::::::::::::::TMR:N::NA::V:::::E:::D:LAE::DR::Q::DLA:D Hmu2180 ::::::::::::::::::S:T:P:::DRVEAI:::::E:::::LA:::DD::::::LA:D Hut0029 AGSASERSSGQALQAGS:V::ISAN:NE:::::::::D::::::::::T:SQ:H::MS:: rrnAC0321 ::::::::::::::::::QI:::G:ND:MAQK::E:::::::::RD::::S::H::TA:N Hmu2513 :::::::::::::::::::L:ISG:LDAM:ST::::::::S:D::D::::SQKH::TA:: NP4764A ::::::::::::::::::TAA::D:::EM:K:::E::S:::::L:S::::SRDH::F::: VNG1684 GRRPGRDAPGLNVDT:::TI::::::::VKQV:DA::::::DVL:D:::Q:KE::::::: hla1352 ::::::::::::::::::K:::L::::A:KA:::E:::::::::E:::EES::T::I::: HVO_2528 :::::::::::::::::::::ML::IAA:KAT:::::::::DRL:D::RK:::::RI::: Hbo2332 :::::::::::::::::::::MV::L:::::T::A::::::KQ:EK::QK::K::::::: HQ2863A ::::::::::::::::::::EMV::::::::V:::::::::DR::E:::KSKK::::::: consensus HFVYEDRPRLRDWVDPDVLRAAP-GLSLLGSMQDHVEDYFDHPKLQQIMQYTLVFLGGSP #oth 61.133.443314425425553431341323113112612132..1.221.1......1. HQ1794A E:::KH:::F::::::GL::::R::IT:V:::D::IAS:::SA::R:LLE:::::::::: NP0204A E::::::S:V::CL::RL:::VR:::T::S::DEY:A:::EN:::R:LV:::::::::A: Hut1007 :::::::S:F::LL:R::VA:G::::TM:::::G:::N:::N:::::LL::::::::::: VNG1755 RV::P::TAF::YAST:M:PL:S:R:R:F:N:D:Y:SRF::::::R:LLE::::::::A: rrnAC1902 RV:::G:E::::Y::::L:PL:::RAR:F:::D:Y:SR:I:::::R:LLE::::::::A: Hmu2180 RV:::G:E:::EF::T:L:PM:::RYR:F:NID:Y:SR:VE::::R:LLE:::::::::: Hut0029 N::::Y::SWK::I::SLMKTGTL::K:FQ:::G::::::ENE:::::V::::::::::: rrnAC0321 K::::::SE::::::L::MT:::V::Q:I:T::S::::::E::::::::::::::::::: Hmu2513 D:::T::::::::I::S:M::::I::::V::::G:::E::E:::::::V::::::::::: NP4764A T:::::::::::::AL::M::::V::K:::T:D:Y:A::::D:::R:::::S::::::A: VNG1684 :::KT::::V:::M::KLAEY:R:::T::::::::::Q:::::::::V:::::::::::: hla1352 ::::::::::::Y::K::::YSW:::::::K::G:::::::::::::L:::::::::::: HVO_2528 ::::T:::A:T:YI:L::F:YSW:::::V::::::::N::::::::::::::::::::A: Hbo2332 ::::T::TK:S:FA:W::IKN:R:::::I::::::::K::::::::::::::::::::A: HQ2863A :::::::AE:S:YA:W::MKN:R:::::I::::::::Q::::::::::::::::::::A: consensus HNTPALYNLMSHVDFNLGVYYP------EGGIGGVVDGIVELAEELGVEIETDAEVTEIS #oth 71...1.22...1.2121.11.22112141.333111253411511.13241342.5429 HQ1794A Y::::::S::::::::M:::::::::::R:::AS:::S:ATI:H::::N:::NTP::GL: NP0204A :::::I:T::::::::::::H:::::::T:::AS::::VA:::RD:::D:::GTP:SGLD Hut1007 ::::::::::::::Y:M::::::::::::::MYSL:E:LA::G:::::TYR::V:::D:Q VNG1755 :::::::SI:::::L:GN:F::::::::::::A::::ALA:::V:Q:AT:::GVG:NA:: rrnAC1902 :::::::SI:::::L:MN:F::::::::::::A:::::LGS::R::::D:Q:GT::QH:A Hmu2180 Y::::::SI:::::L::N:F::::::::::::A::::ALA:::R:Q::T:R:GV::QHVG Hut0029 S::::I::M:::A:::::::::QPVDGGP::::A:::A::D:::::::T::::T:::::T rrnAC0321 RT::::::M:::::::::::::::::::D::V:A::::L:::G:::::TY::::::N::: Hmu2513 E:::::::I:::::::::::::VG:DDG:::::V:I:AF:::GR:::::YV::S::D::T NP4764A N::::I::M::::::::::::::::::::N:LRS:::AC:::G::::::YV::::::::V VNG1684 DT:::::::::::::G:::::::::::::::M:::::::TA::R:::::FR:GHP:SA:K hla1352 T:::::::::::::Y:M::::::::::::::::A::::::::G:D::::FV::::::A:E HVO_2528 N:::::::::::::::M:::::::::::D::LA::::A::D::G:::::FH::SP:A::A Hbo2332 N:::::::::::::::M:::::::::::D::L::::::M:S:G::::::FRVESP:N::R HQ2863A T:::::::::::::::M::::::::::::N:V:::::::::::D::::TFH:N:P:S::R consensus GRRG--GFALETEDGD-FRADRVVSNADYAHTERELLPDGKRQYDADYWDDRTYAPSAFL #oth 53651143726154166584171.32132222123.125652314531.332.11.1.21 HQ1794A RAHSDT:VRVQ:SADT:HI::::::TVPV:::D::::S::VSDH:GS::ES:::::G::: NP0204A PADN::AITVS:DA:T:H:::T::A::AP::VD:D:::::VAE:GD:::S:::::::::M Hut1007 ETIT:::L::Q:TA:R:R::::::A::PP::V:::::SP:::DH:L:H:::Q::::::L: VNG1755 ::::::E:T:A:D::T:RTT:L::N::NP:YA:::::DT:G:DHAP:::::Q::::::LM rrnAC1902 :EA:::A:E:T::::V:VAS:V:::::NP:Y::QH::DPAA:DH:P:H::EQ:::::::M Hmu2180 :EA:::Q:E:S:D::L:VES:L:::::NP:D:::A::D:RD:AH:PG::::Q:::::::: Hut0029 R:KD::::L:::A:::QR:P:V::A::::::A:QD:M:AHE:::::G::::::::::::: rrnAC0321 R:KD::::LV::VH::TTHP:E::V::::G:A:::::::HE::::D:::::K:::::::: Hmu2513 K::D::S:HV::V:::VY:P:ET:V::::G:A:::::::HE:::ED:::::::L::::Y: NP4764A N:KD::::TV:SSA::::D::::::::::::::Q::::EHE:::::E:::S:::S::::: VNG1684 ::::::::K:D::P::AVL::V:::D:::::::QA:::AQ::::::::::A::::::::: hla1352 ::::::::::D:A::ERYLT:L:::D:::::::Q::::KH::::SDE::ES::::::::: HVO_2528 :::::::::VR::::RE:LC:Q:::D:::::::Q::::EK::::::::::S::::::::: Hbo2332 ::EE::A:VTR::::RE:YS:Y:::D:::R:::MD:::E::::::E:::QS:::::::Y: HQ2863A ::E:::A:VTR::TDAE:YSES:::::::R:::M::::PE:::::P::::S::::::::: consensus LYLGVEGDVDPLEHHTLVLPTDWDDHFEQIFDDPAWPDDPAYYLCVPSKTDDTVAPDGHS #oth 3.2....2134.3..1.11.31.461.351.13.3..3..11.2212.4..331..11.3 HQ1794A :::::::KL:S::::::I:::::QS:::S:::::T::T::S::VN:::Q::S:::::::: NP0204A :::::::::E::Y::::::::::::::R:::ET::::::::::IN:::S::P:M:::::E Hut1007 W:F::::::G:::::S::F:D:::P::AS::EE:G:::::::::S:::I:::G:::ED:H VNG1755 F::::::::E::A::S::::P:::G::A:L::::G::::::F::S:A::::::::::::E rrnAC1902 ::::::::::::A::S::::::::G:::::::R:G:::::::::S:A::::E:::::::H Hmu2180 :::::::::::::::::::::::S::::A:::E:R:::::::::S:T::::::::::::H Hut0029 :::::::E:PE::::S::F::::GEY:DD::E:::::E::S:::::::::::D:::E::T rrnAC0321 M:M::::::E::K:::::::::::P::DD:::E::::::::::::::::::::::::::: Hmu2513 M:::::::::::::::::F::::S:::DA:::R:R:::::::::::::::::::::E::: NP4764A :::::::::E::::::::::::::G:::::::T:::::::::::::::::::S:::E::: VNG1684 :::::::::E::A:::::::S:::T::A:::::::::::::::::::::::::::::::: hla1352 :::::::::PN::::::::::G:NH::::::::::::::::::::A::E:::::::E::: HVO_2528 ::::::::::E:A:::::::::::::::T:::::::::::::::::::::::S:::E::: Hbo2332 :::::::::PE:::::::::::::::::K:::::::::::::::::::::::::::E::: HQ2863A :::::::::GD:A::S:::::::::::::::::::::A::::::::::Q:::D::::::: consensus NLFALVPIAPGLDDTPEIRERYRDLVLDDIAENTGVDLRDRIVVEETFCVSEFADRYNAT #oth 2212.2.1.22.2.5426.351.3521411.421131.2....514423221.4323233 HQ1794A TVVI::::::::::SDA::::::EK::T:L:VH::I:::::::::::A:T::::A-MGYP NP0204A AVVV::::::::::G:AV::TF:EQ::N:::TH::::::::::L:R:A:::::GQ:FG:P Hut1007 AVVV:I:::A::E:SD:R:QE:::W::::L:T:I:::::::::TAASM::DD:TE:LHYP VNG1755 AVVI:L:::::::::::::AQ:::RL:GTL:AQ:::::::::::::SA:::::SEQFGDP rrnAC1902 AIVV::::::::::G:A:::E::AF::::L::Q::::::::::::::A::::::E::GDP Hmu2180 AVV:::::::::::A:DV:::F:EQ::T:L::H::::::::::S:T:A:::::::::GDP Hut0029 :::::::::TE:::PQ:T:D::::KIIA::::::::E:E:::::::Q:SI:::::::::: rrnAC0321 :::V::::::::H:GD::::E::EK::A:::D:::::::::::Y:KQ:A::D:GE::::: Hmu2513 :::V::::::D:H:GD:::AE::EQI:A:::::::::::::::F::G:A::D:::::::: NP4764A :::::::V::::::DA:T:AW:::::::::::::::::H::::F::::T:::::::::S: VNG1684 :::::::V::::::::AV::S:::::::::::::::::::::::::R:S:::::::::SH hla1352 ::::::::::::E::::L::E:::::::::::::DTE::::::F::::::DD::::::SY HVO_2528 :::::::::A::E::::R:::::::::::::::::::::::::L::S:::ND:KE:::S: Hbo2332 :::V:::::A:::::::Q:::::::::::::AH::E:::::::L::S:::DD:S:::::: HQ2863A :::::::::A::::SE:H:Q:::N:I::::::H::::::::::::RS:::DD::::::S: consensus QGTALGLAHTLRQTALLRPPHRSDAVDGLYFTGSFTTPGIGVPMCLISGEHTAEAVIEDA #oth 5.1.1......4..222..4332654332122.2314..1.1..1111.22216436537 HQ1794A D::::::::::T::GPF::A::::::SR::HA::::D::::M:::::N:K:V:S::VR:I NP0204A :::::::::::S::GP:::SI::SVS:S:FYA::Y:S:::::::::T::::A:A::RA:: Hut1007 E::::::::::F::GPM::S::AKQ:::::YV:G::S:::::::TI:::::A:::::::E VNG1755 G::::::::::F::GP:::GK:-:GP::H:YV:AY:N::::M:::::::::VTK:::D:D rrnAC1902 :::::::::::F::GP:::S::-AGLE:::Y::AY::::::M:::::::::::RDIV::S Hmu2180 D::::::::::F::GPF::S::-GPL::F:Y::AY::::::M:::::::::::T:IF::Y Hut0029 K:::M::::::::::M::::IE:S:::D:::::GYS:::V:::::::::::A::::L:NS rrnAC0321 E::::::::::::::::::NN::S:::::::::::::::::::::::::::::::L:::I Hmu2513 E:::::::::::::S:::::I::S::::::::::::R::V:::::::::::A:NEL:::Q NP4764A :::::::::::::::::::::::::CP::::::A:::::::::::::::::::::LLN:: VNG1684 ::::::::::::::::F::::::T:L:::::::AN:::::::::::::::V::NN:LA:: hla1352 ::S:::::::::::S::::::::::L::::::::T::::::::::::::QL:::ELSKT: HVO_2528 :::::::::::F:::::::::G:::::::::::::::::::::::::::QL:::EMA::: Hbo2332 :::::::::::::::::::::H:EE:S::::::::::::::::::::::QL:::KMA:RM HQ2863A A::::::::::E:::::::G:H:S:::::::::::::::::::::::::QL:::KMADR: consensus R------------------------ #oth 5565646353324322222222211 HQ1794A KNDRATSRISSVSSVVSQAFGFD:: NP0204A TGGLFSGR::::::::::::::::: Hut1007 :ERGIKARFLG:::::::::::::: VNG1755 PAASGSTDPLAVPGEFNFDTPTTAD rrnAC1902 PFETKGDRSASTAD::::::::::: Hmu2180 PALGDTEALASVE:::::::::::: Hut0029 ::::::::::::::::::::::::: rrnAC0321 A:::::::::::::::::::::::: Hmu2513 ::::::::::::::::::::::::: NP4764A ::::::::::::::::::::::::: VNG1684 ::::::::::::::::::::::::: hla1352 -:::::::::::::::::::::::: HVO_2528 ::::::::::::::::::::::::: Hbo2332 A:::::::::::::::::::::::: HQ2863A T::::::::::::::::::::::::