|
Pairwise sequence scores | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1612 | Hut0535 | NP4040A | rrnAC0831 | Hmu1318 | HQ2461A | hla0771 | hla1612 | Hmu3451 | Hbo2693 | Hut2896 | HVO_2913 | HVO_A0475 | VNG1190 | VNG1332 |
1250 | Hut0535 | 1676 | 1310 | 1395 | 1394 | 1066 | 1174 | 1149 | 1204 | 1165 | 1181 | 1205 | 1212 | 1215 | 1285 |
1294 | NP4040A | 1310 | 1623 | 1429 | 1408 | 1121 | 1190 | 1173 | 1258 | 1221 | 1230 | 1249 | 1256 | 1192 | 1226 |
1333 | rrnAC0831 | 1395 | 1429 | 1645 | 1469 | 1140 | 1235 | 1197 | 1275 | 1264 | 1247 | 1276 | 1283 | 1229 | 1279 |
1324 | Hmu1318 | 1394 | 1408 | 1469 | 1633 | 1123 | 1210 | 1194 | 1281 | 1239 | 1276 | 1279 | 1294 | 1273 | 1306 |
1357 | HQ2461A | 1066 | 1121 | 1140 | 1123 | 1616 | 1364 | 1371 | 1325 | 1384 | 1325 | 1352 | 1336 | 1239 | 1104 |
1450 | hla0771 | 1174 | 1190 | 1235 | 1210 | 1364 | 1734 | 1556 | 1431 | 1419 | 1396 | 1438 | 1417 | 1264 | 1132 |
1432 | hla1612 | 1149 | 1173 | 1197 | 1194 | 1371 | 1556 | 1608 | 1418 | 1415 | 1381 | 1430 | 1414 | 1272 | 1140 |
1490 | Hmu3451 | 1204 | 1258 | 1275 | 1281 | 1325 | 1431 | 1418 | 1609 | 1425 | 1451 | 1423 | 1441 | 1354 | 1207 |
1476 | Hbo2693 | 1165 | 1221 | 1264 | 1239 | 1384 | 1419 | 1415 | 1425 | 1610 | 1400 | 1471 | 1455 | 1273 | 1182 |
1481 | Hut2896 | 1181 | 1230 | 1247 | 1276 | 1325 | 1396 | 1381 | 1451 | 1400 | 1613 | 1452 | 1477 | 1299 | 1151 |
1545 | HVO_2913 | 1205 | 1249 | 1276 | 1279 | 1352 | 1438 | 1430 | 1423 | 1471 | 1452 | 1594 | 1578 | 1316 | 1200 |
1555 | HVO_A0475 | 1212 | 1256 | 1283 | 1294 | 1336 | 1417 | 1414 | 1441 | 1455 | 1477 | 1578 | 1603 | 1334 | 1216 |
1368 | VNG1190 | 1215 | 1192 | 1229 | 1273 | 1239 | 1264 | 1272 | 1354 | 1273 | 1299 | 1316 | 1334 | 1611 | 1339 |
1252 | VNG1332 | 1285 | 1226 | 1279 | 1306 | 1104 | 1132 | 1140 | 1207 | 1182 | 1151 | 1200 | 1216 | 1339 | 1613 |
216 symbols consensus ----------------MSSYELPPLPYDYDALEPHISEQVLTWHHDTHHQGYVNGWNAAE #oth 11111111222221323142..11...1......21....12......1.1..1.133.. Hut0535 ::::::::MEEFDMSEH:NP:::S:::::::::::::::::E:::::::::::::LG::: NP4040A :::::::::::::MPEH:NP::::::::::::::S:::::V::::::::::::::LES:: rrnAC0831 :::::::::::::MSEH:NP:::::::::::::::::::::::::::::::::::LES:: Hmu1318 :::::::::::::MSEH:DP:::::::::::::::::::::::::::::::::::LA::: HQ2461A ::::::::::::::::-M::::D::::E::::::QL::::::::::::Q::::::::N:: hla0771 VLQRTLLPVPNMEMNVDM::::D::::::::::::::::::E:::::::::::::::S:: hla1612 ::::::::::::::::-M::::D::::::::::::L:::::E:::::::::::::::S:: Hmu3451 ::::::::::::::::::EH:::::::::::::::::::::::::::::::::::::::: Hbo2693 ::::::::::::::::-M::::D::::E:::::::::::::::::::::::::::::S:: Hut2896 ::::::::::::::::::D::::::::::::::::::::::R:::::::::::::::::: HVO_2913 ::::::::::::::::-M::::D::::E:::::::::::::::::::::::::::::::: HVO_A0475 ::::::::::::::::::D:::D::::E:::::::::::::::::::::::::::::::: VNG1190 ::::::::::::::::::E::::::::::::::::::::::::::::::::::::::D:: VNG1332 ::::::::::::::::::QH:::S::::::::::::::::V:::::::::S::D:L:S:: consensus ETLAENREAGDFGSSAGALRNVTHNGSGHILHDLFWQNMSPEGGDEPEGALADRIEEDFG #oth 11.12..2311132131.211....11..3..11..33.1.4..21.4.3.311.11... Hut0535 :::::::AS::H:TTG:::G:::::::::Y::T:::E::::N::GK:::::LE::::::: NP4040A ::::::::::E::G::A:I::::::::::Y::T:::E::D:N::G::S:D:::::::::: rrnAC0831 :::::::D::::::::A:MG::::::C::Y::T:::E::D:N::G::::E:L:::::::: Hmu1318 ::::::::S:E::::::::G:::::::::Y::T:::D::::N::G::S:E:R::::A::: HQ2461A AE:E:::DSH::S:::::I:D::::S:::L:::::::C:::::::::T:D:G:::::::: hla0771 :::EA::D::::S::G::I::::::S:::::::::::::::::::::::::::Q:::::: hla1612 :::EA:::EH::S::G::I::::::S:::::::::::::::::::::D:::::::A:::: Hmu3451 :::EA:::::::S::S:::::::::::::V:::::::S:::T:::::S:::::::::::: Hbo2693 :::ES:::E::::::P::I:::::::C:::::::::NS::::::S::T:S:::::::::: Hut2896 ::::::::::E:D:::::I::::::::::V:::::::S:::::::::A:D:RE::::::: HVO_2913 ::::::::::E:::::::::::::::::::::::::::::::::::::::::E::A:::: HVO_A0475 ::::::::::E:::::::::::::::::::::::::::::::::::::::::E::A:::: VNG1190 ::::::::T::HA:T::::GD:::::::::::T::::S:::A:::::S:::::::AA::: VNG1332 ::::::::T::HA:T::::GD:::::C::Y::TM::EH:::D::G::S:::::::AA::: consensus SYEAWKGEFEAAAGAAGGWALLVYDSFSNQLRNVVVDKHDQGALWGSHPILALDVWEHSY #oth ..12.11..11..13.1........22121...13..1..2..2..2..111........ Hut0535 ::D:::A::::::::::::::::::PVAK:::::A:::::N::::::::::::::::::: NP4040A :::G:::::K:::::::::::::::PVAD::::L:::::::::::::::::::::::::: rrnAC0831 :::G:::::::::S:::::::::::PVAK:::::P::::::::::::::::::::::::: Hmu1318 :::G:::::::::S:::::::::::PVAK:::::T:::::::::::::::M::::::::: HQ2461A ::D::R::::::::D:S::::::::::::::::::::N::E::F::A::V:S:::::::: hla0771 ::D::::::::::S::S::::::::T:::::::::::::::::I::G::::::::::::: hla1612 ::D::::::::::S::S::::::::T:::::::::::::::::I::G::::::::::::: Hmu3451 :::::::::::::S:::::::::::::::::::::::::::::::::::V:::::::::: Hbo2693 ::::::::::::::N::::::::::::::::::::::::::::::::::::::::::::: Hut2896 ::D::::::::::SG::::::::::::::::::::::::::::::::::V:::::::::: HVO_2913 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_A0475 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG1190 :::N:RA::::::S::S:::::::::H::T::::A::N::E::::::::::::::::::: VNG1332 :::N:RA:::V:::::S::::::::PVAK:::::A::N::E::::::::::::::::::: consensus YHDYGPARGDFVDAFFEVVDWDEPAARYEQAVELFE #oth .1....1..2.122....11.243253133334311 Hut0535 :Y::::D::S:I:::::::N:ETV:DE:QKCLDH:: NP4040A :Y::::D::E:I:G::::::::NV:EQ::K:TQQ-- rrnAC0831 :Y:::::::::I::::::::::KA:EE::KS:SH:: Hmu1318 :Y::::D::S:::::::::::::V:SQ::T::GH:: HQ2461A :::::::::::::::::::::E::SQ::A::::::: hla0771 :::::::::E:::N:::::::N:::T:::::::::: hla1612 :::::::::E:::N:::::::N:::T:::::::::: Hmu3451 :::::::::E:::N:::::::E::SQ::::V::Q:: Hbo2693 :::::::::::I:::::::::E::S::::::::::: Hut2896 ::::::::::::AN:::::::E:::::F:::::::: HVO_2913 ::::::::::::S::::::::::::::::::::::: HVO_A0475 ::::::::::::S::::::::::::::::::::::: VNG1190 :Y::::D::S::::::::::::::TE:F:::A:R:: VNG1332 :Y::::D::S::::::::I:::PI::N:DDV:S:::