|
Pairwise sequence scores | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2000 | Hut2042 | HVO_A0274 | HVO_B0253 | Hbo0144 | rrnAC1004 | Hmu1641 | Hmu0541 | NP4188A | HQ2795A | hla1445 | VNG1379 | HVO_2857 | Hbo2623 |
1130 | Hut2042 | 2063 | 819 | 778 | 864 | 872 | 844 | 876 | 884 | 776 | 843 | 802 | 886 | 880 |
1157 | HVO_A0274 | 819 | 2023 | 1501 | 887 | 814 | 884 | 822 | 850 | 858 | 909 | 918 | 890 | 899 |
1130 | HVO_B0253 | 778 | 1501 | 2010 | 815 | 785 | 856 | 765 | 861 | 820 | 911 | 834 | 831 | 835 |
1118 | Hbo0144 | 864 | 887 | 815 | 2050 | 822 | 778 | 873 | 959 | 864 | 946 | 883 | 922 | 918 |
1274 | rrnAC1004 | 872 | 814 | 785 | 822 | 2144 | 1284 | 919 | 951 | 958 | 1022 | 1057 | 1080 | 988 |
1169 | Hmu1641 | 844 | 884 | 856 | 778 | 1284 | 2109 | 836 | 819 | 825 | 903 | 938 | 960 | 894 |
1253 | Hmu0541 | 876 | 822 | 765 | 873 | 919 | 836 | 1984 | 970 | 1008 | 1061 | 1123 | 1093 | 1124 |
1331 | NP4188A | 884 | 850 | 861 | 959 | 951 | 819 | 970 | 2043 | 1029 | 1151 | 1126 | 1144 | 1122 |
1326 | HQ2795A | 776 | 858 | 820 | 864 | 958 | 825 | 1008 | 1029 | 2030 | 1121 | 1071 | 1095 | 1255 |
1444 | hla1445 | 843 | 909 | 911 | 946 | 1022 | 903 | 1061 | 1151 | 1121 | 2006 | 1185 | 1257 | 1251 |
1395 | VNG1379 | 802 | 918 | 834 | 883 | 1057 | 938 | 1123 | 1126 | 1071 | 1185 | 2004 | 1215 | 1305 |
1414 | HVO_2857 | 886 | 890 | 831 | 922 | 1080 | 960 | 1093 | 1144 | 1095 | 1257 | 1215 | 2043 | 1349 |
1431 | Hbo2623 | 880 | 899 | 835 | 918 | 988 | 894 | 1124 | 1122 | 1255 | 1251 | 1305 | 1349 | 2038 |
300 symbols consensus ----------MDADERAA-----VAERAARAGADVAADRFRTDIDVETKGDKTDVVTEAD #oth 111111111354845354111114.53..24.154.837.15424415.4534.2.143. Hut2042 :::::::::VNEI::ET:AEWRSI:RE::ES:::I:CEY::EG:GNDF:R:QM:P:SK:: HVO_A0274 :::::::::::EKHS:E::::::::VE::ET::EY:FEH::::F:I:Q::::::L:::I: HVO_B0253 ::::::::::::::P:E::::::::ID::EV:::H:SA::::EL:I:Q:::AI:L:::V: Hbo0144 VTISPVLSDTRTMTD:VR::::::::A::A::::::MAM:ER::ET:E:SS:::::S::: rrnAC1004 :::::::::MT::SH:::::::::::::::::GV::REQ::G:LS:DS:AN:N:L:::T: Hmu1641 :::::::::MT:VHH::::::::I::::::::GV::RE:::GTFEI:::A::::L::I:: Hmu0541 ::::::::::--VSDPD::::::L:L:::::::ER:H:L::R:LA::::SG::::::R:: NP4188A ::::::::::--M::::D:::::C:R:::E::::I::AA::DG::S::::E::::::Q:: HQ2795A :::::::::::TTS::IS:::::::RD::::::H::::S:::KLAI:Q:DA::::::Q:: hla1445 :::::::::MA:T::::::::::::::::::::R::N::::S::::::::ED-::::::: VNG1379 :::::::::::HDTD:VS::::::::::::T:GA::L:A:::G::::::SG::::::::: HVO_2857 :::::::::MNEL:A::D:::::R:Q::::D:GA::RRA:::G:A:::::G::::::Q:: Hbo2623 :::::::::::ENEAKVG:::::::R::::::GA::::::::G::::R:DG::::::Q:: consensus RDAQRRVIAVIRERFPDDAIV---------GEEED-----ALKTVPESGAAWVIDPIDGT #oth 331.64136423352332531111122221.1.523231235252.34163.11...... Hut2042 QE::E:I:T:LSD:D::A:::::::::::::::N:::::::E:::::::P::I::::::: HVO_A0274 :ET:::::ST:::::::::V::::::::::::::::::::ER:::::::Y:::::::::: HVO_B0253 :ET::::::A:::::::::V:::::::::::::D::::::E::::::::Y::I::::::: Hbo0144 GA::DEILTT:ADHY:::VV:::::::::::::GN:::::TP:EI::T:DS::V:::::: rrnAC1004 :::::Q:V:T::AE::::RFLCEEDLSTRA:P:A:REPE::VDS::D::SL::::::::: Hmu1641 :E::QQ:V:T:::E:SG:QF:CEEDSPQLA:P:S:AVEETLVEN:::::P::IV:::::: Hmu0541 :E::AA:A::VDDADA:ATL:::::::::::::AA::::::A:S:::T:R:::V:::::: NP4188A :::::::VG:::::Y::EP::::::::::::::S:GETEATADEL:AE:::::V:::::: HQ2795A ::::TA::KS:::T::E::::::::::::::::::::::::::V:::DDTV::::::::: hla1445 :A:::T::ES:::T::::::::::::::::::::::::::ER:::::T:::::::::::: VNG1379 :T:::::VD::DAVYDE:T::::::::::::::A::::::::::::DA:::::::::::: HVO_2857 K::::::VER::GA:::EP:::::::::::::::::::::ER:S:::::P:::V:::::: Hbo2623 ::::S:::D::::EYAA:::::::::::::::::::::::E::Q::SE:::::::::::: consensus NNFVRGTRVWATAVAAVVDGEPVAAANVLPALGDTYAADPEGAERNGTPITVSDRTDPEA #oth 5.121384515221443313523222334.243141623447462115254113441234 Hut2042 ::::::N:L:SVSL:RT::::::T::T::::T::::::G:GVV::::VECA:::::::SS HVO_A0274 Q::T:::NA:V:S::I:E:M::L::V::A::T::::VTTGGEI::::R::::N:EP:I:: HVO_B0253 Q:YT::A:E:V:S::V:ENQT:I::V::S:ET::::V:TAARV::::R:M::::ESNTS: Hbo0144 S:YLH:FT::CQ:::::R:AS:::::VTR::V::::V::DTEFRK::D:T::::ES:::R rrnAC1004 A:Y:::M:L:G:::S:I:::::::SVTY::SY::L:::G::NVT:D::ELS::G:::::T Hmu1641 T:::::N:T:::S:T:L::::::GS::Y:::M::L:::G::SVT:D:KSMR::EEA:TD: Hmu0541 H:Y:::G:CFT:S:SL:A:::::::::::::MD:::RTVDG:VAL::::V:T:::::::R NP4188A ::::H:L:E:::S:V:::::AA::G:T:A::::E:FLLT:D::FL::D:LA::::S:::T HQ2795A ::Y:::::T:::V:GV:R::VVT:GVIT::::N:N:WT:G:S:Y:::::VS::ET::::: hla1445 S:Y::DI:::G:::::::::::::::T:A:::::V:T::TD::Y:::ESMC:::VSN:RR VNG1379 :::::D:QL:::::::::::T::::C:RF:::E:::I:GAD::TL:::::S::EK::::T HVO_2857 :::::NVP:::::::::R::D:I::::Y::::D:C::::D:T:S:::EE:S::Q:D:::T Hbo2623 :::::EL:::G::::::E::T:::::TRF:::E:::WT:G:ATY::SEEV:::::D:::M consensus FVVAPTLWWDFDDRDEYAAACRAIVDRFGDLRRLGSAQATLAMVADGSLDAVIT-NVRAN #oth 44.5226245735154346346534741113114.34.441362.3.4312323237645 Hut2042 LI:::IFGLKDR:::D:DDVTSY:HHEL::::::::G:TSM::::C:EI::A:S:T:HMT HVO_A0274 :I::S::RFGPE::PAVETLAGE:FG:::E:::I:TT:L::SR:::::I:::VGLDEHP: HVO_B0253 :L:SS::RYQVG::PGIERLSGD:FGT::EM:K::TT:L::SRL::::I::::GFDEHP: Hbo0144 :::::::RVGD:N::Q:LSVIETCFADL:::::I::::L::::::A::I:VALG:IG:SH rrnAC1004 :A:::VG:::R:::A:FGRL:S:VG:::::I:::::F:::::H::::A:EGLVC:TRPMA Hmu1641 :L::VVNR:--E:ATAFGEL::IADEEL::V:::::F::::SLL:::GF::AVC:TQS:: Hmu0541 AI:C::I::PM:R:E:::R:T::::E:::::K:P:::::A:GR::A:E::G::::::ET: NP4188A :T:V::V::G::R::::::T:E:::QQ:::M::F::::LE:GYC:A:AVE::V:::IDPE HQ2795A G::T::M:::::S:NQ:GN::Q:::::::::::I:::::A::S:::::::::::::L:TK hla1445 AT:D::::::::S::::::::E:::R::S::::F:A::IV:PT::A:G:EGT:S::L::: VNG1379 ::::::I:::::R::::::::A:::E::::M::Y:C:::V:S:::S:Q:E:T:::::V:: HVO_2857 CT:C::F:::Y:A:::::::A::::T:::::::Y::M:VV:SY:::::::G:::::K::: Hbo2623 C::C::I::G::E::Q::R:TN::::::::M::F:C:::V:::::::Q::G:L::::::: consensus PWDTVAGVHMVRAAGGTVTDLDGNRWRHDSDGLVASNGRAHDAVLEAARA-IDGE----- #oth 1..121.1321151..41..23.34141135121111.94.3421314462535853111 Hut2042 A::::::A:::::G::Q::::S:E:::::::S:I:TS:EI:ED::A:L:GRL:R:::::: HVO_A0274 A::::::::H::Q:::V:::IH::E:LPGRP::::::::::EE:::T:Q:AFEAIH:::: HVO_B0253 A:::::::YL:ER:::::::IH::A:GPGQP:::::::H:::E:::::Q:AFEETR:::: Hbo0144 ::::::::::I:T:::::::::::P:::::::::::::Q::::::D:FDF:----::::: rrnAC1004 ::::L:::::::Q::::::::::EP:T::::SV:::::E::E:FVA:GNEALR::::::: Hmu1641 A:::::::::::::::::::V::D::TP::E:M:::::AN:G:::D:VAQ:VR::SAD:: Hmu0541 ::::I::::L::E:::R::::::D::T::AR:::::::PL:::::D::::::::A::::: NP4188A :::::L:AAL::::::::::IH:EP:::::T::::::::::::::::::K:PERQ::::: HQ2795A ::::L:::A::::::::::::H:DTF::::I::I::::LI:SNA:S::QS:::HPDADQR hla1445 :::S::::F:::Q:::KA::IE::::::::T:::V:::NL::E::D::::::E:LD:::: VNG1379 :::S:::::L::Q:::V:::I::T::TPGAT:::::::T::::::A::QE::RAAAE::: HVO_2857 :::S:::A:L::M:::::::::::A:::::E:::::::HV:::::::::E::::R::::: Hbo2623 :::S::::::I::::::::::S:D::Q:::R:::::::KI::S::::::E::::LDG:::