|
Pairwise sequence scores | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1812 | Hut0272 | NP6256A | NP0794A | VNG2501 | HQ3668A | HVO_0208 | rrnAC2924 | Hmu2746 | hla2583 | Hbo1336 | HQ2947A | rrnB0283 | Hbo2886 |
1149 | Hut0272 | 1837 | 1300 | 862 | 885 | 894 | 967 | 1024 | 943 | 895 | 956 | 645 | 708 | 742 |
1135 | NP6256A | 1300 | 1898 | 834 | 854 | 928 | 932 | 1046 | 1000 | 866 | 979 | 595 | 714 | 710 |
1115 | NP0794A | 862 | 834 | 1835 | 888 | 848 | 939 | 1010 | 992 | 890 | 979 | 662 | 719 | 832 |
1170 | VNG2501 | 885 | 854 | 888 | 1766 | 982 | 1056 | 937 | 879 | 1033 | 977 | 656 | 784 | 765 |
1151 | HQ3668A | 894 | 928 | 848 | 982 | 1899 | 1023 | 1000 | 934 | 1002 | 1159 | 701 | 710 | 753 |
1344 | HVO_0208 | 967 | 932 | 939 | 1056 | 1023 | 1828 | 1080 | 1040 | 1030 | 1160 | 643 | 782 | 805 |
1326 | rrnAC2924 | 1024 | 1046 | 1010 | 937 | 1000 | 1080 | 1850 | 1482 | 1029 | 1110 | 619 | 745 | 740 |
1263 | Hmu2746 | 943 | 1000 | 992 | 879 | 934 | 1040 | 1482 | 1844 | 1012 | 1102 | 644 | 713 | 767 |
1185 | hla2583 | 895 | 866 | 890 | 1033 | 1002 | 1030 | 1029 | 1012 | 1846 | 1173 | 663 | 631 | 699 |
1308 | Hbo1336 | 956 | 979 | 979 | 977 | 1159 | 1160 | 1110 | 1102 | 1173 | 1812 | 669 | 772 | 814 |
778 | HQ2947A | 645 | 595 | 662 | 656 | 701 | 643 | 619 | 644 | 663 | 669 | 1808 | 869 | 844 |
972 | rrnB0283 | 708 | 714 | 719 | 784 | 710 | 782 | 745 | 713 | 631 | 772 | 869 | 1837 | 1063 |
979 | Hbo2886 | 742 | 710 | 832 | 765 | 753 | 805 | 740 | 767 | 699 | 814 | 844 | 1063 | 2013 |
271 symbols consensus ----MMRPRIALLNASHGDAPTRRNFRRELDADLVEFDVTDGELPD------HFAFDGVV #oth 1221345332.221.124567251.13.21..324413345334.51232325461.151 Hut0272 :::::D:::L:::::A:EA:D:::::E:::::::DV:H:PA::::E::::::SLHY::F: NP6256A :::::DQ:SL:::::A:KAEE:KE::H:::::::ET:HCPT::F::::::::D:QY::F: NP0794A ::::-::::::::D:::N:PT:P:::::::::TVER:S:V:::F:S::::::TRR:::L: VNG2501 :::::D::::::V::A:EPGE:A:::::::::E::::HAKG:RV:G:::::::TE::::: HQ3668A MAMGID:::L:::::::N:EH:::::::::::T:::Y:::AN:R:A::::::E:D:::I: HVO_0208 :::::T:::L:F:D:::::SS:S:::::::::::::::::::R:::::::::::DY:::: rrnAC2924 ::::-::::::::::A:DGDDN::::::::::::::Y:::ER::::::::::T:::::CL Hmu2746 ::::-:SL:::::::A:DG:LN::::::::::::::Y:::ER::::::::::T:::::CL hla2583 :::::T:L:F:::::A:DG:N::::::::V:::::::SAS::H::::::::::TE::::: Hbo1336 MKQGHGNL:F:::D:::::SN:::::::::::::A:::A:E::::S::::::::D::::: HQ2947A :::::SDLD:::CD::I::T:AE::::::V::S:TA:KLSVD:Q:PWPTADGEW:Y:AA: rrnB0283 ::::-:NQT::IVD::V:ET:AE::LT:S:::ETTVYK:S::H::P:VPAGGDWRY:::: Hbo2886 ::::-:GV:::::D::V:NT:AE:::::V:::EVTT:KLSE:Q::P:PVTSRAWVY:::: consensus VTGSRASVYWDEPWIRDLTEWVRDAAEAGVPALGVCFGHQLLADALGGRVEDMGEYELGY #oth 21..331..1245.178273234425342326..1.2...22.5331.5.54.322.1.. Hut0272 ::::S::::::KE::GE:KT::G::VR::L::::::::::::::VM::S:KG:::::::: NP6256A :::::::::::RE::GQ:KT::G::::::L:G::::::::::::V::::::G:::::::: NP0794A :S:::::::::::::TATR::::N:VAD:LS:::I:W:::::::::::T::P:::::::: VNG2501 ::::KS:::::::::EA:CDY:E:VHA::::V::::::::V::E::::T::::SGF:::: HQ3668A I::::S:::::RD::QP:IDYTAAVDDRNI:I::::Y:::V::A::::H::S:D:::::: HVO_0208 IS::SS::::::::::N:VS::A::D:R:::L::::::::VV:A::::T:::::AF:::: rrnAC2924 ::::::::::::::::::ES::DA:IDRDIAF:::::::::::H::::T::P:D:::I:: Hmu2746 L:::::::::E::::A:::S:::::V:RD:AF:::::::::::H::::E::P:D:::I:: hla2583 :::::S::::::E::PS:VDY:AE::D::L:V::::Y:::V::E::D:::AG:DGF:I:: Hbo1336 ::::::::::::K::PP:A:Y:A::::HDM:I::::Y::::::T::::H:Q::::::I:: HQ2947A I:::QTA::DH:T:MET:A:LL::LH:LDI:L::::W:::FI:QTF::C:SA:D:::::: rrnB0283 IS::QT:::D:HG::H:::S::::VHR:D::T::I:W:::F::QS:::::V::::H:::: Hbo2886 IS::QI:::D:ND::HGA:::F:R:QA::::T::::W:::FI:Q:V::::V::H:::::: consensus RTVER---DGDDPLFAGIDETFTVFTTHSDRVTELPPGATLLAENDYGIHAFRKGHAFGV #oth 231521115453511214333211.31.1.4.323.33255215.331211.26365321 Hut0272 :P:NQ:::::SN::L::::::M:::MS:::H::DA:::S:VF:K:E:::QG:Q::R:::: NP6256A ::I:Q:::::KNR:LED::::L::::S:::H:R:K:::::VF:R:E:::QG:::HNI:A: NP0794A :::SH:::-:GAG::D:VP:E:::::::::A::::::::E:I:T::::V:G::H:NVY:L VNG2501 ::::::::VA:::::E:LP:SM:A::::G:V:::::AA:::::::::::::::V:QSV:: HQ3668A :E:TQ:::TQS:T::ED:P:::::::S::::::::::ETIK::::::::::::R:::W:: HVO_0208 NEI::TRP:DGNDIL:::G:R:::::S:G:::::::S::D:::::EF:V::::RN::::: rrnAC2924 ::::H:::::ENE:L::V::S:::::::::::A:V:::::TF::::::::G:::ENV:S: Hmu2746 ::::H:::::TSE:LD:V::R:::::::::::V::::::EQF:A::::::G:QTEDV:S: hla2583 NE:RH:::RS::E::::V::E:::::::G:A:VD:::N:S:IG:::H:V::::D::CW:: Hbo1336 :E:SQ:::TAE:E::E::::::::::::::A:A:::E::E:I:::E::V::::::::W:: HQ2947A QQI:::::YDSS::::DFPAE:IA:E::::E:VR:::N::E::G:SRSCQ::SL:T:Y:: rrnB0283 :::H::::R:E:::::DMSPS::A:Q::::::A:::A::VE::R:Q:::Q:::L:TRY:: Hbo2886 ::IT::::V::S:::E:VPRR::A:E::::::A::::::VT::R::F:VQ:::V:GSY:: consensus QFHPEYDRETAEEVTRGK-D--LPDERIDAVLDGITPENYAAACEAKRLFDNFTAYVRRH #oth .1.....42.1361353.133614343235.33422543243134314211..2752557 Hut0272 :::::::MD:::MI:::::SEQVSPAL:E::::::HA::::R:::::A:::::LTF::ET NP6256A :::::::M:::RMI:K:::SGD:SPQQ::::::::HST::E::::::Q:::::LS:::DI NP0794A :S:::::P::::S:V::::::H::ET::ER:CEE:::AA:ER:QP:::A::::LQV:E:N VNG2501 :::::::T::::RIATE:::::VSEA:R::::A:::::A::::::T::::E:::RQLG:- HQ3668A ::::::::K::RSI:TN:::::::TAQ::::::E::T:::T:::KV:Q::E:::::::TV HVO_0208 :::::::TD:::AIA:Q::::F::::::RS:V:::::::::::::::::::::VT::N:T rrnAC2924 :::::::P:::KT::K::::EQ:A::::::::::V:E:::R:::::::::::::EFAA:: Hmu2746 :::::::T:::R::::::::DQ:SE:::QQ::::::S:::D:::::::::::::Q:L:GR hla2583 :::::::LK::R:::E:::RER:G:A:V::::EA::::A:DD:::::P::::::E:A::L Hbo1336 :::::::PD::A:::K::::::::::::QS::::::A:::D:::::::::::::::A::I HQ2947A :::::::LK:VKM::D::REEGVSESVVET::TSA::SQHTKTQT:::V:E::LSI:EQ: rrnB0283 ::::::::::::W:IGN::::::T:::RET:TAT::D:SV:::R::TTV:E::LGL:AT: Hbo2886 ::::::::::::W::KN::E::::E:::QH:::::NENAV:D:NVS:AVC:::VKI:TTT consensus QA----GTVTAA------------------- #oth 5755674786845533311111111111111 Hut0272 :RARVDAAE:QP::::::::::::::::::: NP6256A :EVGRV:KSGDVPETEP:::::::::::::: NP0794A RT:::RP:PQV:DD::::::::::::::::: VNG2501 --::::::DGG:EN::::::::::::::::: HQ3668A :SGCRSE:N:ETEAYYQ:::::::::::::: HVO_0208 N::::::S:ES:A:::::::::::::::::: rrnAC2924 AG:GVT:AT:::DD::::::::::::::::: Hmu2746 AGTGES:G:A::DD::::::::::::::::: hla2583 K:::DRES:A::GD::::::::::::::::: Hbo1336 RSEATA------::::::::::::::::::: HQ2947A :-::::------::::::::::::::::::: rrnB0283 :R::RP:RLD--::::::::::::::::::: Hbo2886 :PTQSDEWSEPTPSESALGSVPDQDFEETGR