| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 2326 | HVO_A0177 | HQ1493A | hla0216 | Hut0142 | NP2442A | Hmu1059 | rrnAC0048 | VNG0668 | HVO_1006 | Hbo0500 |
| 1306 | HVO_A0177 | 2486 | 985 | 1030 | 1195 | 1142 | 1107 | 1057 | 1071 | 1103 | 1117 |
| 1492 | HQ1493A | 985 | 2528 | 1229 | 1222 | 1178 | 1152 | 1204 | 1172 | 1421 | 1410 |
| 1513 | hla0216 | 1030 | 1229 | 2686 | 1229 | 1215 | 1240 | 1253 | 1165 | 1338 | 1369 |
| 1638 | Hut0142 | 1195 | 1222 | 1229 | 2475 | 1303 | 1330 | 1385 | 1170 | 1256 | 1288 |
| 1580 | NP2442A | 1142 | 1178 | 1215 | 1303 | 2278 | 1265 | 1437 | 1153 | 1299 | 1317 |
| 1645 | Hmu1059 | 1107 | 1152 | 1240 | 1330 | 1265 | 2320 | 1592 | 1243 | 1301 | 1395 |
| 1659 | rrnAC0048 | 1057 | 1204 | 1253 | 1385 | 1437 | 1592 | 2328 | 1187 | 1261 | 1377 |
| 1440 | VNG0668 | 1071 | 1172 | 1165 | 1170 | 1153 | 1243 | 1187 | 2232 | 1287 | 1387 |
| 1713 | HVO_1006 | 1103 | 1421 | 1338 | 1256 | 1299 | 1301 | 1261 | 1287 | 2343 | 1637 |
| 1760 | Hbo0500 | 1117 | 1410 | 1369 | 1288 | 1317 | 1395 | 1377 | 1387 | 1637 | 2488 |
390 symbols consensus ----------------------------MDEVLVADDVRKSYGDTVALDGVSLSVDAGEV #oth 11111111111111111112233332334451232331413..134.122.113264..2 HVO_A0177 :::::::::::::::::::MSGHTAAESTRPAVT:TA:::Q::::::VRD:::D:HE::: HQ1493A :::::::::::::::::::::::::::::TAA:::EN:Y:::::VR:::::::::::::M hla0216 MNETTAADVDAADDATRGRDAAGADAADP:A:V:GEG:::::::V::::::DIR:ES::: Hut0142 :::::::::::::::::::::VEVGGDRSVTAIAI::::RT::::::::A::::::P::I NP2442A ::::::::::::::::::::::::::::--M:IR:S:::RQ::E:::::::::::::::: Hmu1059 :::::::::::::::::::::::::::::::::::E:::R:::::::V::::::LG:::: rrnAC0048 :::::::::::::::::::::::::::::::::::S::GRR::::::::::::TATT::: VNG0668 ::::::::::::::::::::::::::::::S:::::::A:::::AA::R::::::SE::: HVO_1006 :::::::::::::::::::::::::::::::::A::GLK:::::VE::S::::::A:::: Hbo0500 ::::::::::::::::::::::::::::::::::::::::::::RD::S::::::S:::: consensus FGLIGPNGAGKTTLVRALTGTTDAD-GRVSLFGESPTAVDRSRIGLLPQSFSPHERLTAR #oth 11.1.......1..3121...15343.63422.44.3533241212...2.4.24...13 HVO_A0177 :::::::::::S::LGL::::RIPTE:S:RV::::::::::::LSV:::E::::R:::G: HQ1493A :::V::::::::::::::::::TVR::QL:IR:VT::KL:K:QV:V:::::T:PG::::H hla0216 ::::::::::::::::::::::E:E::DLRV::VP:RE::PQ:::::::::D:P:::::T Hut0142 :::V::::::::::A::I:::::Y:::T:A::::Q:R:I::::L:S:::::::::::::: NP2442A :A::::::::::::I:::::::A:E::DI:V:::::ES:A:H:::::::E:T:A:::::: Hmu1059 :A:V::::::::::::::::::::A::::E:::Q::::I::A:::::::D:T:::::::T rrnAC0048 LA:V::::::::::::::::::::T::E:T:::Q::RT:A:D:::::::::A:::::::: VNG0668 :A:V::::::::::::C:::::TP:G:::E:L::P:QDAQKQ:L:::::::::PD::::A HVO_1006 ::::::::::::::::::::::AV:S:SAAIL:RD::E:::Q:L:V:::E:R:AG::::: Hbo0500 ::::::::::::::::::::::PVE::H::VL:T:::::E:::::::::::::AA::::: consensus ELVEYYAGLYDDARDPDAVLDDVGLA-DDADTWYENLSGGQQRRACVATALVNDPDLLFL #oth ..24..1...323143351.33..153132434.23.....2..2.114111...21.2. HVO_A0177 :::S::::::P:P:PV:E:::R:::DDE::A:A:TD::::::::V::GA::::::E:::: HQ1493A ::I:::::::E:T:::AT:::::::SG:STTQ:::T::::::::V:::I::I:::AV::: hla0216 :::G::G::::A:::AES::R:::M::::::V:::T:::::K::T:::::I::::::::: Hut0142 ::L::::::::::LT:GR:::::::I::S:::Y:::::::::::V::GS:::::::::V: NP2442A ::ID::G::::ET::T::I::::::T::S:A:A::::::::K:::::G:T::::::::I: Hmu1059 :::S::::::::::SVED::A::::E:E:S:::::E:::::R:::::::::I::::::V: rrnAC0048 ::L:::::::::T::VE:::::::::::T:S:T:::::::::::T::::::I::::::V: VNG0668 :::G::::::A:S:A:::::ES:::DP:::TR-:GD:::::R::::::A:::::::V::: HVO_1006 :::A:::::::::::::::::E::::::A:::::::::::::::::I:LT::::::V::: Hbo0500 :::S:::::::E::::ES::A:::::G:::N::::D::::::::::::A:::::::V::: consensus DEPTTGIDPAGRRSLWRLLEGLAAGGTTVFLTTHYMAEAERLADRVGLLADGELVAVGSP #oth ......1..1..132141324..32.11121.1.3.4.232..1..12.31.5132315. HVO_A0177 :::::::::::::DV:D:VDS::DD::A:V:::::::::::::::::::T:::::R::P: HQ1493A ::::::::::::::::S:::T:::::::::::S:S:T:V::::::::F:N::Q:LTI:D: hla0216 ::::::::::::::IH::I:R::G::::::::S:A:D:V:::::::A::R::KI::::A: Hut0142 :::::::::::::Q::D:::::::D:::I:::::D:H::::::N:::::::::::::DT: NP2442A :::::::::R:::D::::I::::E:::::L::::::::::E::::::M::::::I:L:T: Hmu1059 :::::::::::::::::::S:::DR:V:ILV:::::E::H::::::::::::S::::D:: rrnAC0048 :::::::::::::D:::::::::DR:V:ILV:::::E::Q::::::::::::T:I:LD:: VNG0668 ::::::V:::::HA::SVF:::::D:::IV::::D::::SA:::::::::::DIA:T:T: HVO_1006 ::::::::::::::::G:V:D:::::::::::S:S:::I::::::::::NA::::T::Q: Hbo0500 ::::::::::::::::N::DD:::::::::::S:S:::V::::::::::NA::::::::: consensus RALVAAHGGESRLVVETDGDPAA-----VDALDAAGRAALSDD----------------R #oth 54.13421.343.41434645343111386357746454553611111111111111113 HVO_A0177 :D::ERF:::T::A:R:ECPR:L::::DL::TPLD::R-YG:Y::::::::::::::::E HQ1493A QS:IDT:A::NK:II::ETALDST:::AFSS:SFDIQTSV:GT::::::::::::::::: hla0216 EE:I:D::::P::E:KL::PASEA:::DCE:VQE:I:E::::ESAGESEDAPAVESTRKG Hut0142 :::ID::::::::T:::ASPL:E::::::::SGLDY:::IV:N::::::::::::::::D NP2442A SE::ER:::D::::::A:DGT:::::::KT::RD::YEL:P:E::::::::::::::::: Hmu1059 E::::EY::QRT:T:GGTF::SV:::::AQT::RPVE--VGE:::::::::::::::::: rrnAC0048 DQ:::E:::D:Q:I:DGSF:E::::::::S:I:YPAET::RNG::::::::::::::::: VNG0668 AD:::::A:SP::::D::A::EL:::::-----:GFDCTRT:A::::::::::::::::G HVO_1006 D:::TEY::::::::R::::AD:DAALGSVS:P::LD:TV:G:::::::::::::::::G Hbo0500 SE:::::::D:::E:::ESL:ES::::ATE::NGHFD::AR:G::::::::::::::::: consensus LVVFGVGPRDIGDVVDALDDAGVAYESLSWKQPDLEDVYLALTGEAVG------------ #oth 4236334.442263424235132521413152.3.111.14.112656111111112222 HVO_A0177 YRF:DA::D:LTAML:H::A:DI:::EV:LVH:T::::::N:AS:RGH:::::::::::: HQ1493A T::KS::::::::II::V:MTT:TV:::T:::::::::::::A::TLNPSRTTKTSNSNE hla0216 :RIG::R:EG:::A::::ET:EIDF:::A:SE:S::::::R::::EYS:::::::::::: Hut0142 :R::D:A:TE::T:::S:T::::QV:::::AE:T::::::E:::T::::::::::::::: NP2442A H:AVPA:::E:PS::E::::::AD::G:V:R::S:D:::V::::TD:A:::::::::::: Hmu1059 ::::D:D:AE::G::AT::G:::E:DE:A:SE:::::A::E:::D::::::::::::::: rrnAC0048 :::Y:IR:ES::NITEQ:GQ::IE:D::T:::::::::::E:::T::::::::::::::: VNG0668 ::FE::D:TAV:EIAA:::::D::FDA:::RE:S:::A::::A:D---:::::::::::: HVO_1006 IT:H:::::::::::A:F:::::V::::V::::G::E:::S::::QFE:::::::::::: Hbo0500 ::FE:LT::::::A::::::::I::DT:T:T:::::::::S:::::FE::::::::DNPS consensus ---------------AAEPAAGAAVGGGDQ #oth 223333323324454544457645441574 HVO_A0177 :::::::::::DCIAS:G::GV:GDA:VTR HQ1493A DTAPRIDDVNTGGNVMSQT:ITTTTEES:: hla0216 ::::::::::::::PRS::LDEV:PD:::R Hut0142 ::RGGQRLDDGAASA:E::N:PTPPTE:SS NP2442A :::::::::::::::----:G:EP:TEASP Hmu1059 :::::::::::::AVQGGAGRP:::::EQS rrnAC0048 ::::::::::::::QRG::QQTEP:A::A: VNG0668 :::::::::::::::-------:ER:EVV: HVO_1006 :::::::::::::::::R:::A:::::DR- Hbo0500 FADAPMADGGGNVGQS:RGGH:GSR::DE: