|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2433 | VNG0458 | hla1707 | HQ3308A | HVO_2374 | Hbo2073 | NP1976A | Hut1609 | Hmu2070 | rrnAC1510 | rrnAC2150 |
1670 | VNG0458 | 2485 | 1592 | 1543 | 1536 | 1562 | 1479 | 1445 | 1452 | 1456 | 1466 |
1926 | hla1707 | 1592 | 2632 | 1797 | 1913 | 1956 | 1605 | 1534 | 1549 | 1544 | 1558 |
1860 | HQ3308A | 1543 | 1797 | 2432 | 1922 | 2013 | 1541 | 1548 | 1510 | 1534 | 1565 |
1940 | HVO_2374 | 1536 | 1913 | 1922 | 2429 | 2178 | 1574 | 1539 | 1578 | 1581 | 1593 |
2011 | Hbo2073 | 1562 | 1956 | 2013 | 2178 | 2443 | 1632 | 1599 | 1583 | 1605 | 1621 |
1843 | NP1976A | 1479 | 1605 | 1541 | 1574 | 1632 | 2445 | 1637 | 1673 | 1689 | 1662 |
1932 | Hut1609 | 1445 | 1534 | 1548 | 1539 | 1599 | 1637 | 2451 | 1878 | 1909 | 1938 |
1898 | Hmu2070 | 1452 | 1549 | 1510 | 1578 | 1583 | 1673 | 1878 | 2420 | 1927 | 2016 |
1939 | rrnAC1510 | 1456 | 1544 | 1534 | 1581 | 1605 | 1689 | 1909 | 1927 | 2421 | 2174 |
1964 | rrnAC2150 | 1466 | 1558 | 1565 | 1593 | 1621 | 1662 | 1938 | 2016 | 2174 | 2435 |
361 symbols consensus -------------------------METRKVQVTGGSTYTVSIPKEWATENDVSAGSVVE #oth 11111111111111111111111121.1....1.....1...1..3..2212112.2111 VNG0458 :::::::::::::::::::::::::::R::::::::::F::::::D::RDHS:E::DE:G hla1707 MGQRSGCTSVYISDNLKGDGIRYRG::::::::::::::::::::T:::::::E::TEI: HQ3308A ::::::::::::::::::::::::MV::::::::::::F:::::::::NS::I::::::: HVO_2374 ::::::::::::::::::::::::MV:::::::::::::::::::D:::D:G:::::E:: Hbo2073 ::::::::::::::::::::::::MV:::::::::::::::::::D:::::S:::::E:: NP1976A ::::::::::::::::::::::::::::::::::::::::::L::G::::::I:G::::: Hut1609 ::::::::::::::::::::::::::::::::::::::::::L::::::::::::::::: Hmu2070 ::::::::::::::::::::::::::::::::::::::::::L::::::::::::::::: rrnAC1510 ::::::::::::::::::::::::::::::::L:::::::::L::::::::G:ES::::: rrnAC2150 ::::::::::::::::::::::::::::::::::::::::::L::::::::::::::::: consensus FHPEGDSLLLTPRRDDERTEGTLDITGLEGD-ELTRAVMTMYVSGFDIIALEAARITAEQ #oth .121422.112.34242342.111133152321.1...2........115.13531224. VNG0458 :::DSG::::::ID:TDTDK:::T::DMH:E:::M::::::::::::VL::::ES:DPD: hla1707 :::D::::F::::SEE:::R::I:::D:S:Q:A:::::T::::::::V:E::GTE::T:: HQ3308A :Y::::::::A:TT:E:::R:S::V:D:A:E::::::::::::::::::S:TSS:::TT: HVO_2374 :Y::::::F::::SEE:::::::::AT:::::::::::::::::::::::::SS:::TD: Hbo2073 :Y::::::F::::TE::::::::::AN:A:::::::::::::::::::::::SG:::T:: NP1976A ::::EE:::::::HG:DKI:::::::::::::::M:::V::::::::::T::T:QVS:A: Hut1609 ::S:E:M:::S:QD:R::A::S::VS::TEET:::::::::::::::::R:::P::S:T: Hmu2070 ::A:E:L:::S:::ENG:V::::::S::DE:H:::::::::::::::V:T::TP::SPK: rrnAC1510 :YA:D:L::VS:QHG:DHV:::::V::::NRH:::::::::::::::::R:::::::::: rrnAC2150 ::A:R:L:::A:Q::NG:V::S::VE:::NRH:::::::::::::::::Q:::T:::::: consensus RRTIRDATQGLVGLEVIEETRDRVVLQDLLDSSELSIHNAVTRMRLISLSMLEDAVAALA #oth .131.2.1.1.....111..43.1121.........22..11..2.1121.13..13.14 VNG0458 ::V:::::::::::::L:::SQ:::I:::::::::::::::R::H::AV:::::::T::: hla1707 :S:V:E:V::::::::L::::N:::V:::::::::::::::::::::::::::::I:::S HQ3308A :::::E:::S::::::L::::::I:VR::::::::::::::::::::A::::G::ID:I: HVO_2374 :::::E:::S::::::L::::::::IR::::::::::::::::::::A:::::::I::I: Hbo2073 :::::E:::S::::::L::::::::IR::::::::::::::::::::::::::::I::I: NP1976A :::::::::::::::::G::SG::R:::::::::::M:::::::::VATT::A:::T::L Hut1609 ::Y::N::::::::::::::G:::::::::::::::VN::I:::::V::T:TA:::T::I Hmu2070 ::VV:::V::::::::::::S:::::::::::::::V:::I:::Q:V::T::A:::D::V rrnAC1510 ::I::::::::::::M::::A:::::::::::::::VL::I:::::V::T::S:::E::I rrnAC2150 ::I::::::::::::M::::T:::::::::::::::V:::I:::::V::T::S:::E::I consensus EDDDDLAADVIQRDDDVDRLWYMVSRIFRTVLRNPTAAEEIGLPRETCFDYQSSARQLER #oth 33.412.1.134..1.1....31...1..32..3.21.422.23..42..11.2...... VNG0458 TR:P:I:R::TN::::::::::V::::::GA::S::V:Q:::IT::VA:::H:::::::: hla1707 :R:H:::R:::G::::L::::LV::::::AT::T:K::::L:::::E::::H:::::::: HQ3308A TL:T:M:R:I:::::::::::MV::::::ST::T:K::::L::E::M::::::A:::::: HVO_2374 KQ:::M:R:::::::::::::MV::::::AT::T:K::::L:::::I::::::A:::::: Hbo2073 :L:::M:R:::::::::::::MV::::::AT::T:K::::L:::::V::::::A:::::: NP1976A D:::E:::::V::::::::::S::::V::S:::D:S::AT:::D:::::::H:::::::: Hut1609 ::::E:::::ME::::::::::::::V:::::::::::NDM:F::::V:::::G:::::: Hmu2070 :::::::::::H::E:::::::::::V:::::::::::T:::F::::V:::::::::::: rrnAC1510 :::N::::::::::::::::::::::V:::::::::::N:::F::::V:::::::::::: rrnAC2150 ::::::::::M:::::::::::::::V:::::::::::N:::F::::V::F::::::::: consensus IADHATKIAHLSLNIEEPIPEDVADALDELRAEAISVPETAMDALLADDSDEATRLANEA #oth 11...2..143254243333314333253.66216512241.1..12223231241.231 VNG0458 V::::::::TATHDLNDD:::::V:::ET:Q:D:TDII:::::::F::TA::::A::TQ: hla1707 :G:::::::::T:::D::L:D::VE:VN::HGD:VE:ID::::::F::::E::::::::: HQ3308A ::::::::G::T:KFN:QV::::I:S:M::CD::Q:IVDA:::::FTA:NNKV:D:::D: HVO_2374 :G::::::::::::F:::VDGEIVQ:IQ::FKDTE::VNGG::::F:EE::::S:::::S Hbo2073 :G:::::::::T::F:::VS:::VS::E::YM::RK:VDDG::::FT::P:::S::::D: NP1976A :G:::A:::THAETLST:-:T:A:::IRD:HD::TE:VDMG:::::E::::R:::::HD: Hut1609 :::::N:::DIATD::A-V::EE::::::::EI::::::::::::::::P:::VS::::: Hmu2070 :::::::::E::RE:DA-:SGETGEK:RT::E::AT::::::E:::::::EA:VEQ::Q: rrnAC1510 :::::::::S::QE:G:-:TGET::L::Q:ET:::A:::::::::::::N:::VE::::: rrnAC2150 :::::::::S::QE:G:-:TGET:EL::Q:E::::A::::::::::TE:::::VE:::G: consensus RERIQDIDERAREVDELLRELD-PQRAQLLGLVVDSLSRSADYGGNIAETALQKAAPTP- #oth .461441.262.61.34213211133.13..11...11.1....1.1..1...1.1.2.3 VNG0458 :AQVR:::DQ::D::DR:HG:T:AHH::H::::::::::::::::::::::::::::::N hla1707 :TGVRA::::V:AI:::::D::::T:::::::::::VL::::::::V::::::::::::: HQ3308A ::SV:Q::::::QI:::::G::::A:::::::I:::V::::::::::::::::::::::: HVO_2374 ::AV:A::AS::GI:::::D::::A:::::::I:::V::::::::::::::::::::::: Hbo2073 ::NV:Q::::::KI:::::D::::A:::::::I:::V::::::::::::::::::::::: NP1976A :T::ANV::LT:R::DEI:::::::Q:::::::::::::::::::::::::::N:::K:: Hut1609 :G::PEV::K:::::S:I:QF:D::::HR::::::::::T::::S::::S:::::V:R:A Hmu2070 :GT:E:V:AM::::::QV::A::::S::V::::::::::T:::::::::S:::::::R:: rrnAC1510 :S::PEV::T:::::GKV:::::::S:::::R:::::::T:::::::::S:::::::R:: rrnAC2150 :SQ:P:V::T:::::GQI::F::::S::V:::I::::::T:::::::::S:::::::R:Q consensus - #oth 2 VNG0458 P hla1707 : HQ3308A : HVO_2374 : Hbo2073 : NP1976A : Hut1609 : Hmu2070 : rrnAC1510 : rrnAC2150 S