|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2514 | pNG7066 | Hut1001 | VNG0766 | NP1386A | rrnAC0819 | Hmu1528 | hla2608 | HQ2746A | HVO_1181 | Hbo0378 |
1084 | pNG7066 | 2695 | 957 | 1047 | 946 | 944 | 892 | 943 | 981 | 1044 | 982 |
1997 | Hut1001 | 957 | 2515 | 1802 | 1903 | 1905 | 1811 | 1731 | 1754 | 1841 | 1757 |
2003 | VNG0766 | 1047 | 1802 | 2493 | 1862 | 1848 | 1738 | 1857 | 1842 | 1898 | 1801 |
2192 | NP1386A | 946 | 1903 | 1862 | 2517 | 2109 | 1944 | 1959 | 1938 | 2010 | 1938 |
2194 | rrnAC0819 | 944 | 1905 | 1848 | 2109 | 2505 | 2093 | 1979 | 1949 | 2004 | 1885 |
2026 | Hmu1528 | 892 | 1811 | 1738 | 1944 | 2093 | 2390 | 1803 | 1813 | 1888 | 1846 |
2138 | hla2608 | 943 | 1731 | 1857 | 1959 | 1979 | 1803 | 4087 | 2013 | 2076 | 1997 |
2135 | HQ2746A | 981 | 1754 | 1842 | 1938 | 1949 | 1813 | 2013 | 2501 | 2074 | 2012 |
2251 | HVO_1181 | 1044 | 1841 | 1898 | 2010 | 2004 | 1888 | 2076 | 2074 | 2506 | 2162 |
2159 | Hbo0378 | 982 | 1757 | 1801 | 1938 | 1885 | 1846 | 1997 | 2012 | 2162 | 2408 |
543 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 pNG7066 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1001 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG0766 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP1386A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0819 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1528 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2608 MVAVSTSPPPPTATRSLEVALHLGDQLVGVDRLRHVPVGTGLHRLHHLLLLVDARTHHDH HQ2746A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1181 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0378 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 pNG7066 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1001 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG0766 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP1386A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0819 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1528 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2608 GVGPAVLDRSSRLDSGHLGHDDVHRHRIRFVRLEQLHRLRAVLRLADHLEGILQRVPDDG HQ2746A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1181 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0378 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111212222222222 pNG7066 ::::::::::::::::::::::::::::::::::::::::::::::::MRPDRTRNREIN Hut1001 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG0766 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP1386A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0819 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1528 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2608 PLKRGVVDDEYPLGHTWPSTAERHKRVDRHGRPGPIDRPPRVLDPHCHRRAGTPCIFDEA HQ2746A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1181 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0378 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -----------------METRKVQRLGPSTLAMTLPAEWAKEHDVEKGDEVSL-RMGGKG #oth 222222222222222332421111211211111.1.11.1333313....1221.4233. pNG7066 ARSSKSQEDKAVTPDPIRMK::::Q::S::::V:V:VD::RQ::IS:::::IVQ:DENG: Hut1001 ::::::::::::::::::D:::::Q::::::::::::::TT:T:::::::I:I::I:D:: VNG0766 ::::::::::::::::::G:::::Q:::::::::::::::RSQ::V:::::TV::E::R: NP1386A :::::::::::::::MR:::::::::::::::::::::::S:QN:::::::::::::S:: rrnAC0819 ::::::::::::::::::::::::::::::::::::::::SA:::::::::::::::::: Hmu1528 :::::::::::::::::---------------::::::::SA:::::::::::::IS:N: hla2608 YNEHRNKVKVYPAVSTS::::::::::::::::::::::::::G:N:::::::::::::: HQ2746A ::::::::::::::::::::::::::::::::::::::::::NE:N:::::::::::::: HVO_1181 :::::::::::::::::::::::::::::::::::::::::::N:::::::TI::TS::: Hbo0378 :::::::::::::::::---------------:::::::::::N:N:::::::::::::: consensus TLTVLPESVQQEDSEATIHADNLDADALERAIVAQYVLGRRVIHVEAEEG-TLDSEHINA #oth 2.1.3.112441133.3.5144121411....12......12.112453232.313111. pNG7066 S:L:V::QPTI::V::::D::A:TP:::::::IT::::::QL:R:::TA-:P:GI::RD: Hut1001 ::::::::::SG:T::::YVAD:::::V::::::::::::Q::::::D::A::::A:::: VNG0766 S:::T:A:AR:GET::::::TDF::::V:::::G:::::::I::::S:A-:A:::A:::: NP1386A ::::M:::::::E:::V:::QS:::::V:::::::::::::I::::V:::G::::AQ::: rrnAC0819 ::::M:::::T:E:::I:::E::::ASV:::::::::::::::::::P::E::E:S:::: Hmu1528 A:::::::::A:E:::I:Y:A::::::V:::::::::::::I::ID:G::E::P:::::: hla2608 :::::::::ST:E:K:V:N::G:::QS::::::::::::::::::RS:G-:::::::::: HQ2746A ::::::::AS::::S:S:L::::N:N::::::::::::::::::I:R:DA:A:::::::: HVO_1181 :::::::::NT:::K:::R::S:N:E::::::::::::::::::I:KS:::A:::D:::: Hbo0378 ::::::::AS:::AL:::R::A:N::::::::::::::::::::I:KS:::A:::::::: consensus VYNAETQLMGLGVIEETPERIAIRCSVDPEDFTLNNLLERLENTGSTMRGEAVKALAHGN #oth 112..11.....11.12142121....112..2.31..1..12.1111.111121.11.1 pNG7066 IM:::RR:::::IV:QAERTVTV::::A::::D:PT::G::SR:EAVI::D:IS::IE:D Hut1001 :::::::::::::::::::::TV::::::G::S:H:::::::S::::::N::IR:::::: VNG0766 ::S::::::::::V::::A::T:::::::A::D::::::::::::::::::::::::::: NP1386A ::::::::::::::::::::::::::::::::::D:::::::S::::::N:G:::::::: rrnAC0819 ::::::::::::::::::D:::::::::::::::::::::::S::::::N::::S::::: Hmu1528 ::::::::::::::::R:::::::::::::::::::::::::S::::::N::::S::::: hla2608 ::K:::::::::::::::SD:S::::::::::::D::::::::::::::::::::::::: HQ2746A ::S:::::::::::::::::::::::::::::::D::::::::::::::::GI::::::: HVO_1181 ::K:::::::::::::::::::::::::A::::::::::::::::::::::::::::::: Hbo0378 ::K:::::::::::::::::::::::::::::S:D:::::::::::::::::I::::::: consensus PDLAQRALNRERQANKIFVLLLRLIFTAYQNPNLARAVGLDSGFPLIGYRSVAKNLELTA #oth 2..111111.11.11.1.1.1...1..2121.2121211.331...1....1.1111.4. pNG7066 T::VETVES:QE:VE:L:Y:F:::V::I:R::R:NQ::::ET:::::::::::QDVV:M: Hut1001 ::::::::::::::::::::::::::::H::::V::GI:::DA:::::::::::::::A: VNG0766 :::::::::::::::::::::::::::::HD:G:::T::::E::::V:::::::::::V: NP1386A ::::::::::::::::::::::::::::::::::::::::S::::::::::I:::::::: rrnAC0819 :::::::::::::::::::::::::::::::::::::I::ND:::::::::I:::::::: Hmu1528 :::::::::::::::::::::::::::S:::::::::::::D:::::::::I:::::::: hla2608 ::::::::::::::::::::::::::::::::::::::::EE:::::::::::::::::: HQ2746A A:::::::::::::::::::::::::::::::::::::D:N:::::::::::::::::I: HVO_1181 :::::::::::::::::::::::::::S:::::::::::::::::::::::::::::::: Hbo0378 ::::::::::::::::::::::::::::::::::C:::::E::::::::::::::::::: consensus DNAEDIAEIVLEADGHTLDVDQSTMRRIREFTDQVDDITELAVQAVVERDYDLTIEVREL #oth .1.11..4113222312222135.12211122131123246215121311.131243.44 pNG7066 :T:VE::SLATDSA----TP::L:ASKLT:LG:AL::AASATRS::TTP:::A:EDA:AA Hut1001 :::::::D:A::::::S::::AG::D:::DMVE:::K:S:Q::K:A:D:::PAA::::SK VNG0766 ::::::::::MAT:::::::::A::::::::::A:::VAAS::S:A:N::::A:VA:::Q NP1386A ::::::::::::TE::::N:::K::::::::::D:NE::::G:::A:T:::::A::T:DA rrnAC0819 :::::::::A::TED:S:N::S:::::::::::::N:::::::::A:D:N::TA:Q:::: Hmu1528 :::::::::A::S:D:::T:ES:::::::D:::::NE:::K::T:T::::::TA:::::T hla2608 :::::::D::M::E:::::::SA:::Q::::::::::L:A::::::::::::::V:C:D: HQ2746A :::::::T::GD::E::::::TG:::::::::::::E::QI::N:::::N::K::TA:T: HVO_1181 :::::::N::MD:E:::I:::::::::::::::H::E::TT::R::::::::::::C::: Hbo0378 :::::::N::MD:::::::I:ST:::::::::::::K::AT:::S:::::::::V:C::: consensus FRDIRDREADILDDLP-EMDNEKLLQVREVLVSLQQTAQYAMRNAEIATNLALNEESDHV #oth 16524222611143.21225136..441111.2.231.221211111.21..11132312 pNG7066 :DLVD::I::LNAH:E:SERP:P::ALQRAV:L:ERS:RH:RDSLSV::H::FRNDPSL: Hut1001 ::E:DEMG::L::G:E:::P:::::A::::::G::D::::SV:::::::::::::::E:I VNG0766 :SA:E:::::::A::::::N:AD::EA:::::::::S:::S:::::::A::::::Q:A:T NP1386A :A:::N::VE:::::D:::P::D::R::::::::G::::::V:::::::::::::::::: rrnAC0819 YK::G:K:HE::::::::::::A::E::::::::::::EF:V:S:::::::::::::E:T Hmu1528 YAE:G:::TE:::::::::G::S:::::::::::::::E::V:::::::::::::::E:T hla2608 :GRLE:::QE::GE::NDL::DT::MT::::::::H::E:::::::::A::::::P:::: HQ2746A :QQ:S:::DE::S::::::::DN:::I:::::::::::::::::::::A:::::::CE:: HVO_1181 ::E:S:::R:::N::::::E:Q::::I:::::::::::::::::::::S::::::::::: Hbo0378 ::::::K:R::::::D:::::Q::::I:::::::::::::::::::::A::::::::::: consensus TIE #oth 226 pNG7066 :G: Hut1001 :L: VNG0766 :LT NP1386A ::K rrnAC0819 ::: Hmu1528 E:K hla2608 E:I HQ2746A K:R HVO_1181 ::D Hbo0378 ::G