|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2310 | pNG2007 | hla0388 | HQ3263A | HVO_0292 | Hbo1190 | VNG2160 | NP1282A | Hut2332 | Hmu2839 | rrnAC2744 |
1662 | pNG2007 | 2833 | 1456 | 1441 | 1430 | 1507 | 1524 | 1563 | 1533 | 1544 | 1548 |
1799 | hla0388 | 1456 | 2284 | 1502 | 1709 | 1704 | 1562 | 1561 | 1667 | 1654 | 1644 |
1700 | HQ3263A | 1441 | 1502 | 2293 | 1666 | 1772 | 1400 | 1536 | 1579 | 1558 | 1526 |
1893 | HVO_0292 | 1430 | 1709 | 1666 | 2303 | 1951 | 1568 | 1581 | 1645 | 1668 | 1676 |
1934 | Hbo1190 | 1507 | 1704 | 1772 | 1951 | 2372 | 1619 | 1632 | 1676 | 1699 | 1689 |
1833 | VNG2160 | 1524 | 1562 | 1400 | 1568 | 1619 | 3559 | 1637 | 1677 | 1708 | 1652 |
1884 | NP1282A | 1563 | 1561 | 1536 | 1581 | 1632 | 1637 | 2294 | 1705 | 1801 | 1750 |
1926 | Hut2332 | 1533 | 1667 | 1579 | 1645 | 1676 | 1677 | 1705 | 2324 | 1867 | 1938 |
1999 | Hmu2839 | 1544 | 1654 | 1558 | 1668 | 1699 | 1708 | 1801 | 1867 | 2311 | 1950 |
1976 | rrnAC2744 | 1548 | 1644 | 1526 | 1676 | 1689 | 1652 | 1750 | 1938 | 1950 | 2344 |
475 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 pNG2007 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0388 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3263A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0292 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1190 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG2160 MTASSPNRARTSLAAYASAGPVSLPAGSTRTVASGTSSRTRSAYASRVTASRSSAKAARS NP1282A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2332 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2839 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2744 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111112112212121222222222 pNG2007 :::::::::::::::::::::::::::::::::::::::::MCVHTRKPDGLHPKPVSHC hla0388 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3263A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0292 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1190 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG2160 AVRRSRLRSSSPSASSCLGRWLRLAGYSRVPVPPASRTAATVCVTARSPGGWSACRRVRR NP1282A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2332 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2839 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2744 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -------------------------------------------MSDLRTHAAEIHEQFSD #oth 22222222222222222222222222221221233233233322121333.321211131 pNG2007 PVIDTGQSEWRSFTFTTICMGFRPRQAYRQPSPIANETENTMSN:NIQQE:QD::D:LPE hla0388 :::::::::::::::::::::::::::::::::::::::::::::E::QE:EA:A::::: HQ3263A ::::::::::::::::::::::::::::::::::::::::::::T::Q::::::A::::E HVO_0292 ::::::::::::::::::::::::::::::::::::::::::::T:::::::::AD:::: Hbo1190 :::::::::::::::::::::::::::::::::MKTKVEASET:::::::::::A::::: VNG2160 RGPNACLRGASDRVHPGCGDLKGVGSKHRYVSHRNTRGDGYTT::::SDT:Q:V:DDL:E NP1282A ::::::::::::::::::::::::::::::::::::::::::::::::E::T:::::::: Hut2332 ::::::::::::::::::::::::::::::::::::::::::::T::H:::E::::::A: Hmu2839 ::::::::::::::::::::::::::::::::::::::::::::T::H:P:T::Q:::D: rrnAC2744 :::::::::::::::::::::::::::::::::::::::::MTE:::::::T:::::::: consensus HLDVSVDDVEERLETLVNEYRVPVDEARRSVVNSYLDEAGIDRDELGG--GGGNEQVDLA #oth 42133322233..43..41.3..32..1...312.1211131.12222113221243633 pNG2007 SV:A:PE:I::::T:::DD::::L:::Q::::ST::SDSDV:::DVSS::ENE:Q::::E hla0388 ::::GA:E::::::N::::::::L:::::::T::::ED::ME:::::-::R::S:S:LVN HQ3263A E::IDETT:RD::N:::E::S::A:::::::I:::::::D::::::S:::SD:::EIP:: HVO_0292 :::::A:E::::::S::T:::::::::::::::::::::::E::::A:G:S:::::TL:N Hbo1190 ::::DA:::::::QN::D:::::::::::::::::::::DLE:::::-::R:::DE:H:: VNG2160 :V:AT:::::A:::K::S::K::::::::::E:H::::::L:::D:A:::::::DT:EVE NP1282A AI:E:::ET:S::::::S::Q:::E:::::::ST:I::SD::::::S-::::SSQSAEVT Hut2332 Q::::::::T:::D::::::Q::IS::::::T::::::::L::EDI::G:S::::T:QA: Hmu2839 Q:::T::EI::::::::E::K::LS::::::::T:::D::M:::Q:S::::::::H::I: rrnAC2744 Q:EID::::I:::D::::D:Q::IS::::::::T::::::M:::Q:::GD:::::::NV: consensus DIDEDEQWVDVTAKVVELWEPRSDSIAQVGLLGDETGTIKFTKWSKSDLPELEEGQVYRL #oth 21122.1.2.3112111..11321112....1..21.13..12141.1.1313.133.3. pNG2007 E:T:A:::::I::::AD:::::::::::::::::::::::::::A::::EA:T::::::: hla0388 E:::::::::LRVEL:D:::::::::S::::::::S:::::VAFET::::::T:::A:E: HQ3263A S:::::::I::::::::::::QNEA::::::I:::S:RT::VAFET::::AI:::A::E: HVO_0292 :::::::::::R:::::::::::E::::::::::DS:RM::VSFTT:E:::::::KS:A: Hbo1190 :::Q::::::I::::::::::::E::S::::::::S:RM::VSFTT:E:::::::A:::: VNG2160 :V::A:::::I::::::::::::::VG:::::::P:::::::::A::::ET:D::::::: NP1282A :::AP:E:L:L:V:::D::::GA:::::::::::::::V:::::Q:::::A:::DE:::: Hut2332 :V:AP:E:::M:::::::::::::AV::::::::::::::::::::::::::A::AT:H: Hmu2839 :V:AP:E:I::::::::::DATA:AV::::::::::::::::::::::::::::::::E: rrnAC2744 :V:AP:E::::R:T::::::::A:AV::::::::::::::::::::::::S::::KS:A: consensus GNVVTDEYQGRFSVKLNRTTSIEELDEEIEVGDDATEVEGALVDIQSGSGLIKRCPEEDC #oth 3.......1.41.....2..5.133.2211...233332...1.2...........221. pNG2007 ::::::::::QY::::::::T::A::QD::::::T:DA:::::::::::::::::::D:: hla0388 S:::::::E:SY::::::::Q:T:I::::::::N:DT::::::::::::::::::::::: HQ3263A E:::::::::DY::::::::D::K::TD:T:::S::TI::::I:::::::::::::TDG: HVO_0292 ::::::::::N:::::::::::T:::::::::::S:S:::::::S:::::::::::::G: Hbo1190 ::::::::::N:::::::::::::::::::::::S:T:::::::::::::::::::::G: VNG2160 :::::::::::Y:::::K:::::AV:::F::::NED::A:::::V::::::::::::::: NP1282A E::::::::::::::::S::N::R::TD::::::T::T::::::::::::::::::KP:: Hut2332 R:::::::::::::::::::V:::T::::::::::L:::::::::::::::::::::D:: Hmu2839 R:::::::::::::::::::T::AV::::::::::V:::::::::::::::::::::::: rrnAC2744 R:::::::::::::::::::T::::::A::::::SV:AD::::::::::::::::::D:: consensus TRVLQNGRCSEHGEVEGEFDLRIKGVLDDGEEVTEVIFDREATEELTGITLEEAKQMAMD #oth .........1...411........1.2.1.23.2....3311..412124.31112..2. pNG2007 ::::::::::::::G:::::::::::I:N:DT:Q:::::K::::QVAD:::AQ:QE:::: hla0388 :::::::::::::Q:::::::::::::::::T::::::::::::::::MG:::::D:::: HQ3263A :::::::::::::T:D::::::::::I::::T::::::T::M::K:S::::S::Q:::R: HVO_0292 :::::::::::::S::::::::::A:V:::D::H::::N::M:::::::E:D:::::::: Hbo1190 :::::::::N:::N::::::::::::::::DN:H::::G::M:::::::S::::QE:::: VNG2160 :::::::::N::::GD::::::::::::::TD:H:::::E::::A::::G::::::::K: NP1282A ::::::::::::::::::::::::::::::T::::::::K::::::::::::::Q::::: Hut2332 :::::::::::::::::::::::::::::::::::::::Q::::N:::V::::::D:::: Hmu2839 :::::::::N:::::::::::::::::::::::::::::E::::K::::S:::G:E:::: rrnAC2744 :::::::::::::::::::::::::::::::::::::::ED::::::::A:::::E:::: consensus ALDTTVVADEMRQDILGRYYRVTGPTLGRYVLANETERLTGPVDAEAVLIKARSI #oth ....21.21.125333.5...14..11...1.11251515433.3145..3...1 pNG2007 ::::S:::::I:EVT:::::::Q::E::::L:V::F:Q:AEMH:P:QL::T:::: hla0388 ::::::::E::GD:V:::::::::::F:::::VD:M:D-P:A::V:NA::E:::: HQ3263A ::::S::VE:I:::LI:A:::IS::E::::L::DTVDH::N:A:P:::::::::: HVO_0292 :::::I:EE:::G:LV:Y:::::::::::::::::V:::RE:A:::EL::::::M Hbo1190 :::::::V::::T:LV:M::::S::E:::::::D::D::NE:A:::::::::::: VNG2160 ::::::::::::AT:::K::::::::F:::::::D::L::TRP:T:S:::R:::: NP1282A ::::E::VE:::EVV::Q::::::::::::::::D::::D::::::S:::::::: Hut2332 ::::S::VE::QGT:M::::::E:::F:::L::D:I:T::DA::P::T::::::: Hmu2839 :::::::::::::KV::::::::::::::::::::Q:::D:::::::M::::::: rrnAC2744 :::::::::::::K::::::::R:::F:::L::D:Q:::::A:::DEI:::::::