|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2288 | VNG2650 | HVO_0601 | Hut1502 | HQ3386A | HVO_0358 | hla0369 | NP0302A | Hbo1122 | rrnAC2408 | Hmu0161 |
1712 | VNG2650 | 2298 | 1475 | 1475 | 1478 | 1471 | 1529 | 1497 | 1532 | 1533 | 1532 |
1786 | HVO_0601 | 1475 | 2297 | 1555 | 1501 | 1641 | 1563 | 1568 | 1579 | 1683 | 1641 |
1862 | Hut1502 | 1475 | 1555 | 2336 | 1603 | 1614 | 1670 | 1668 | 1638 | 1643 | 1718 |
1783 | HQ3386A | 1478 | 1501 | 1603 | 2352 | 1619 | 1663 | 1635 | 1780 | 1619 | 1666 |
1857 | HVO_0358 | 1471 | 1641 | 1614 | 1619 | 2308 | 1701 | 1684 | 1750 | 1675 | 1681 |
1899 | hla0369 | 1529 | 1563 | 1670 | 1663 | 1701 | 2392 | 1745 | 1678 | 1702 | 1724 |
1874 | NP0302A | 1497 | 1568 | 1668 | 1635 | 1684 | 1745 | 2267 | 1710 | 1672 | 1764 |
1929 | Hbo1122 | 1532 | 1579 | 1638 | 1780 | 1750 | 1678 | 1710 | 2311 | 1711 | 1779 |
1877 | rrnAC2408 | 1533 | 1683 | 1643 | 1619 | 1675 | 1702 | 1672 | 1711 | 2270 | 1864 |
1948 | Hmu0161 | 1532 | 1641 | 1718 | 1666 | 1681 | 1724 | 1764 | 1779 | 1864 | 2294 |
343 symbols consensus ----------MRLAVLGAGAVGGSVVDLAGEYGHTVTAFADSSSAVVDA------DGIDA #oth 111111123232.213.2.1..41.211.321..411.3.1132111151111113.2.4 VNG2650 :::::::::::::::M::::::QA:::Q:ASH::::V:V:::T:::::G::::::S:V:: HVO_0601 ::::::::::V::C::::::::SA::E::A:H::V:::::::D::::::::::::::::: Hut1502 :::::::::::D::IM:T:T::S::A:::S::::R:::M:NVDA:AI:P::::::::::T HQ3386A MADPQSRTTGK::::V:::::::A:::::S:::::I::::::T::AI:P::::::N:::T HVO_0358 ::::::::MSL::::::::::::::L::::D:::E:V:::::::S:::P::::::::L:P hla0369 ::::::::::VK:::I::::::R:::::::::::E:V:V::::::::ADGSDGRDA:V:S NP0302A :::::::::::K:S:::S::::AA::E:::::::E:V:V:::A::A::E::::::S:L:: Hbo1122 :::::::MSGK:::::::::::::::E::ES:::::::::::A::::::::::::::::P rrnAC2408 :::::::::::K:::I::::::S:::E::SDH::S:::::::::::I:S::::::A:::T Hmu0161 ::::::::::VK::::::::::R::AE:::D:::::::L::::G:::::::::::::::V consensus AAVLARKREDGV--VGDADPEDALAADYDVLVEATPTTLGDAEPGFSHVEAALERDRHVV #oth 321353145415122.43222412412..1.1.1..1.....1...1.234..221111. VNG2650 :::C::::DAAS:EI:TGA:S:::::::::::::::::::::::::G:::R::SA::::: HVO_0601 D:::SK:::::::::::::::SVFD:::::::::::::::::::::::::R::AD::::: Hut1502 :GA:E:Q:SE:MAHL:::::D:V:::E::A:::V::V::::::::::::::::::::::: HQ3386A D:::T::D:T:T::::ES:SSV:VD:T::::I::::::::::Q:::::LRT::::::D:: HVO_0358 S::HD::ERE::::::G::::AVFDV::::::::::::::::::::::::R::AD::::: hla0369 D::V:::A:R:I:::::D::D::::::::A:::::::::::::::::::RT:::::::A: NP0302A E:::E:::T::R:::::::ADA::E::::::::::::::::::::::::KQ::::::::: Hbo1122 :S::KQ:HDE:R::::S::::S::H::::::::::::::::::::::::RH::::GAD:: rrnAC2408 ::::D:::T:::::::SGA:::::S:E:::::::::::::::::::G:IQ::::::::A: Hmu0161 D::::A:EA::T::::S:R::T::E:E::A:I::::::::::::::G::::::::::::: consensus LANKGPVAERYADVRALEAESAGSVRFEATVGGAIPVLSTIEDIGPGHVTAVRGVLNGTA #oth ......1...122133132213.422.1.1.1..2.211.2314325322.11..1.... VNG2650 ::::::::::::G:CE:A:A::::L:::::::::::::A:::R::ADR:R:::::::::: HVO_0601 :::::::::::::::::::D:E:T:::G::::::L:I::::::V::SR:S::Y::::::: Hut1502 ::::::M::::::::::::::E:E:::::::A:::::::::::Y:::TM::::::F:::: HQ3386A ::::::::::::::QQVLHD:D::L:::::::::::::::L:::S:AQ:::::::::::: HVO_0358 :::::::::::::L:::::::G:T:Q:::A::::::I::::S:L:AP::::A:::::::: hla0369 ::::::::::FG:L:::V:D:::DI:::::::::::AV::V:::E::::::::::::::: NP0302A :::::::::::DEL:S:::D:::::::::A::::::I::::A:LD-:Q:::A:::::::: Hbo1122 :::::::::::::LM:::R:N::::::::::::::::::::::LS:E::::A:::::::: rrnAC2408 ::::::::::::::::::R::E:N:L::::::::M:I::::D:FD:S:I::::::::::: Hmu0161 ::::::::::::::::::R::::E:L::::::::M::::::D:FD:E:I::A:::::::: consensus NFILSRMAAEGLDYEHVLAEAQDLGVAEADPTFDVDGTDAALKCVILANVLA-------D #oth ..1.1...11.13.1.......11.......2...1.1.1...21.21..1311111115 VNG2650 ::V::::::A::E:::::::::EV::::::::::::::::::::A:::::IG:::::::- HVO_0601 ::V::::::::::::::::::::::::::::A:::::::T:::G::V::::::::::::E Hut1502 ::::T:::::::G::::::::::::::::::A:::E:::::::::::::::::::::::Q HQ3386A ::::::::T::IN::::::::::::::::::A:::E:::::::::::::::S:::::::T HVO_0358 :::::::::::::::::::::::::::::::::::::I:::::F:::::::S:::::::: hla0369 ::::T:::::::::D::::::::::::::::S:::::::::::::::::::SFGAADDP: NP0302A ::::::::::::G::::::::::::::::::::::E:::::::::::::::Y:::::::- Hbo1122 ::V:::::T::::::::::::::::::::::S:::E:::::::::::S:::::::::::E rrnAC2408 ::::::::T::::::::::::::::::::::::::::::::::G::I::::S:::::::: Hmu0161 ::::::::::::G::::::::::::::::::::::E::::::::::V::::::::::::G consensus GEREYTLDDASVEGITNIPGSALELAAEDGRTIRLIGEVTDDEVRVGPRLVPENGALAVS #oth 342113.2114.2..5422121.2..321.1.1..1212443612.2...1132331111 VNG2650 -D:::D::GV::D:::GVAP::::::ET::Q::::::::GP:H:::::::::A::T:::: HVO_0601 ::T:F:::::E::::QELS:GM:D::Q:::Q:::::V::A:GS::::::::SA:::V:P: Hut1502 :D::FS:E:::::::KD:::::::::R:::::::::::::G::I::S::::::HSE:::: HQ3386A DN:::::A::T:D:::::::::::::::E::::::V::A:PTG:H:::::I:Q:T::::T HVO_0358 ::T::A::::A::::R:V::T::D::::::::V:::::A:A:G:::A:::I:QGS::S:T hla0369 DA::FS::::A::::RDV:::::R::::::::V:::::A:EET:::A::::::::T:::: NP0302A -:DT:::E:::::::ADL:::::::::::::::::::D:S:G::S:A::::::::T:::: Hbo1122 :::::::A::N:::::::::::::::::::Q:V:::::S:P:R:::S:::::Q:T::::: rrnAC2408 D:T:::::::E:T::QE:S:::::::RA::::V:::A::VEGS:::::::::D:AP:::: Hmu0161 ER::::::::T::::SS:::::::::Q::::::::::::A:GD:::::::::::A::S:: consensus GTRNIVQLETEHAGRLNISGRGAGGPETASAVLADVGRLP--- #oth .14.12.1.1421.1.111.1....11..1.1.3.14115342 VNG2650 ::T::::::::::::::L::Q::::AA:::::::::DHIADQQ HVO_0601 :AE:A::I:ADYC:::G:T::::::::::::::T::E::AD:: Hut1502 ::T:::::::DN:::::L:::::::::::T:I::::N:::EP: HQ3386A ::::::::::TN::Q::L:::::::::::::I::::S::-::: HVO_0358 ::Q:::::::K:::Q::::::::::::::T:::S::S::E::: hla0369 ::Q::::I::T::::::::::::::::::::::G:::::Q::: NP0302A ::L::I::::A:::Q:::::::::::::::::::::::::PLE Hbo1122 ::::::::::K:::Q::::::::::::::::::::I:::D::: rrnAC2408 :::::A::::::::Q::::::::::::::::::::I:::-::: Hmu0161 ::::::::::::::::::::::::::::::::::::::::EA: