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Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2618 | Hbo2791 | HQ2500A | VNG0600 | Hmu1869 | NP3216A | Hut0466 | HVO_1168 | rrnAC1350 | Hut1470 | hla2014 |
858 | Hbo2791 | 2005 | 855 | 757 | 733 | 738 | 781 | 797 | 716 | 791 | 762 |
1947 | HQ2500A | 855 | 3195 | 1612 | 1645 | 1759 | 1640 | 1789 | 1770 | 1103 | 1141 |
1960 | VNG0600 | 757 | 1612 | 2774 | 1710 | 1763 | 1756 | 1733 | 1796 | 1137 | 1053 |
1924 | Hmu1869 | 733 | 1645 | 1710 | 2806 | 1737 | 1743 | 1758 | 1923 | 1111 | 1042 |
2098 | NP3216A | 738 | 1759 | 1763 | 1737 | 2764 | 1724 | 1845 | 1812 | 1073 | 1120 |
2051 | Hut0466 | 781 | 1640 | 1756 | 1743 | 1724 | 2738 | 1823 | 1820 | 1113 | 1106 |
2197 | HVO_1168 | 797 | 1789 | 1733 | 1758 | 1845 | 1823 | 2723 | 2008 | 1175 | 1121 |
2119 | rrnAC1350 | 716 | 1770 | 1796 | 1923 | 1812 | 1820 | 2008 | 3087 | 1168 | 1139 |
1336 | Hut1470 | 791 | 1103 | 1137 | 1111 | 1073 | 1113 | 1175 | 1168 | 2591 | 1582 |
1288 | hla2014 | 762 | 1141 | 1053 | 1042 | 1120 | 1106 | 1121 | 1139 | 1582 | 2522 |
480 symbols consensus -----------------------------------------------MRVLNYLELEDRL #oth 111111111111111111111111111111111111111111111233342212152673 Hbo2791 :::::::::::::::::::::::::::::::::::::::::::::::------------- HQ2500A :::::::::::::::::::::::::::::::::::::::::::::MTL:::::::::S:: VNG0600 ::::::::::::::::::::::::::::::::::::::::::::::M::A:::::AAEA: Hmu1869 :::::::::::::::::::::::::::::::::::::::::::::::V:T:::::VAGW: NP3216A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::A:: Hut0466 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::RY: HVO_1168 :::::::::::::::::::::::::::::::::::::::::::::::V:::::::FASQ: rrnAC1350 MPSERASSFDIMLWVLSGCSELLYGTQALPLTGKVDRIFGPAREPRDV::::::::A::: Hut1470 :::::::::::::::::::::::::::::::::::::::::::::::VLISH:F:W:GVI hla2014 ::::::::::::::::::::::::::::::::::::::::::::::::K:SH:F:F::HV consensus -RSGIGTAVDQQRAALATTDVE-----------------VVTTPWLGA------------ #oth 432135323731132157322311111111111111111344333844111111111111 Hbo2791 :---------------------:::::::::::::::::---------:::::::::::: HQ2500A N:::::::::H:::::NI:::ADVEIYTSLRNALSPRNWIKD:L:SA:VDLDQDSGDSYR VNG0600 ::G:MV::TN::::::E::::::::::::::::::::::::E:::RAG:::::::::::: Hmu1869 D::::::S:EH::::::DR:::::::::::::::::::::::S::E:G:::::::::::: NP3216A Q:::::::TR:::R::SP:::::::::::::::::::::::K:::N:::::::::::::: Hut0466 GP:::R::AS::::::E::::D::::::::::::::::::::S::D:R:::::::::::: HVO_1168 D:::::::T:::::::::::::::::::::::::::::::::S::PES:::::::::::: rrnAC1350 D:::::::::H:::::SE::I:::::::::::::::::::E::::QEG:::::::::::: Hut1470 :TG:HAQS:QN::KM:DAR::::::::::::::::::::YT:E:V:D::::::::::::: hla2014 :TG::HES:VH::KM:DREGI::::::::::::::::::YT:EAT:D::::::::::::: consensus --------------------PA-AAG--A-GG---F-DFDVAHCNLIGPGSVAVARRARR #oth 111111111111111111152263554536532464544133131331122534234173 Hbo2791 ::::::::::::::::::::--:---::-:--:::-:----------------------- HQ2500A SNKEYSDTDSNSSPPHTHVSAVDGSDST:DSERGCES:I:IV::::V::::F:A:QY:L: VNG0600 :::::::::::::::::::D:VRSI:SL:A:::SC:TA::::::::V:::::::::H::: Hmu1869 :::::::::::::::::::H:VD:VRSKLT:::RA:T:V:LV:::M::::TA:TIKH:Q: NP3216A :::::::::::::::::::N::E::FRR:V:::RF:ERV:L:::::V::::A::::::I: Hut0466 :::::::::::::::::::N::T::ATNLGN::SLWA::::V:A::::::TI:::KH::: HVO_1168 :::::::::::::::::::VA:G:::::LLR:DGVVR:Y::::::::::::L::::Q:K: rrnAC1350 :::::::::::::::::::H::W:L:GNIAFNDPM:RE::I::::M::::::::::Y:AQ Hut1470 ::::::::::::::::::::--:---::-:--:::-:--:IL:L:NM::R:IYY:K::Q: hla2014 ::::::::::::::::::::--:---::-:--:::-:--::L::::M::R::WY:K::SD consensus TDIPLVLHAHVTREDFAESFRGSNAVAPALGRYLRWFYSQADLVLCPSEYTKRVLESYPV #oth 6331224.2.412.1.33..122333223233.1431.23..3121...12232144123 Hbo2791 ------M:T:EIG:N:Q::::L:TTFS:IVR::VDF::KR::HLIA::::A::::KQRGL HQ2500A SE:::I::::I::::::::::::TTI::VVE:::K::::H:::L:::::::RS::QA::: VNG0600 ::T:::::::L::::::Q:::::STI::::EP::::::::::::::::::::D::RA::: Hmu1869 ::T:VIC:::::::::RD::::A:V:::::::::K::::::::::::::::RG::Q:::I NP3216A :GT:::::::I::::::G:::::R::G:V:E:::::::::::::V::::H:::::S:::: Hut0466 H::::I::::::::::Q:::::::L:SKP::W:::::::::::::::::::R:::::::: HVO_1168 N:::::::S::::::::::::::T:::::::K::K:::::::V::::::::::T:::::: rrnAC1350 A:::::::::::::::RD::::::LI::V:::::::::::::::::::::::GI:::::: Hut1470 A:V:V:V:::Q:A:::R:::AF:::L:RPMRP::EYA::L::HLI::::HNQD:I:T:-T hla2014 RG::V:A:T:::A:::GD:::FT::L:KP:KP::SRA:RL::ALV:::::NRG:I:E:-T consensus DAPIRVITNGVDIDALAGFESLREEYRERYDLD-------GMVVFAVGNVFERKGLTTFC #oth 31.22231..2.43315.3254233227233121111111242124114112....23.2 Hbo2791 NT::S:V:::I:P:R:::V--YTG::SPKSTIERNGEQESRLT:ANASIL::::::SD:T HQ2500A ET:::::::::::N::S::::Y:::::QK:H:S::::::::P:I:G:::::::::::::: VNG0600 :::::QLS::::LESMQ:Y::F:ADT:A:F:::::::::::T::Y:::E::::::::M:: Hmu1869 :::::P::::I:L:R:T:Y:EF::::::::GIE:::::::::GI::::::::::::S::: NP3216A :::V::V::::::ES:::H:A::DR::S:F:::::::::::T:::::::::::::::A:: Hut0466 S::::PM:::::LAS:E:YGKF:ASA::KH:::::::::::V::::::Q:::::::S::: HVO_1168 :::::PVS::::T:::D:::DR:::::TE:::::::::::::T::T:::::::::::::: rrnAC1350 :::::PM:::::::::::H:DM::D::R:::::::::::::::::::::::::::::::: Hut1470 :T:TT:LS::F:P:R:T:::::::::LN::::::::::::PP:::T::H:IP::::EA:V hla2014 :T:TT::S::::REK:::::::ED::::::::S:::::::PPT::L::H:IK::::E::V consensus RLARQ-TDYDFAWFG---PYDTGP----LASKTVRRWVENPPENVTFTGWVDDIRGAFAA #oth 52.3322342.2...11113452211113314315222532.3.11.2.231.2.3211. Hbo2791 AV:::LQ:VN:::::::::RFNRF:::::TGSS:DKTIQQA:S:CV:P:FA::V:DVY:: HQ2500A QV:E:::S::::::::::::::::::::Q::R::Q::TN:::S::::::::::::::Y:: VNG0600 E::KA:::HE:::::::::::E::::::Q:GAAT:K::AD::A::::::YME:K:A::G: Hmu1869 :V::R::::::T::::::T:E:::::::S::A:::K:TGD::D::::S:::::::::YG: NP3216A :::ER::::E:V::::::::::::::::H::P::::::KD:::::::::::::::::Y:: Hut0466 :V:Q:::P::::::::::::S:S:::::::::::K::T:D:::::::::::::::E:YG: HVO_1168 T::QE:::::::::::::::::::::::H::::::Y::::A:::::::::I:::::::G: rrnAC1350 E::QE::EH::::::::::::A::::::Q:::::S:::N::::::::::::E::::::G: Hut1470 ET::AMP:L::::::YLN:TGG::VDRL:R::ETT:L:::A:::C::::Y:E::::G::: hla2014 D:::ELP:I::::::::::L:LS-:::::KGRETT:LI:ES:::C::::F:::::::::: consensus GDIYLFPTKNENQGIAVLEAMACGKAVVLRDIPVFEEFYTDGEDCLKCSTDAE------F #oth 1.112.1115.11.1221..1211313131..1213232212211.2334642111111. Hbo2791 S:VFF::::S:TE::SII::AY::IPI:T:::::Y:PLLEH:TH:::G:SVE:::::::: HQ2500A ::::F:::::::::::::::::::::::::::::::::::HN::::::E:Q::::::::: VNG0600 :::::::A:V:::::::::::::::P:::::::::R::F:::::::M:::FEA::::::: Hmu1869 ::VFM::A:V:::::V::::::::::C:IS:::A:S:Y:E::H:::I::SER:::::::: NP3216A :::::::::A::::::::::::::N::I::::::::::::H:::::::D:RS:::::::: Hut0466 :::::::::T::::::::::::AE::::I:::::::::F::::::::AE::::::::::: HVO_1168 ::V:::A:::::::::::::::::::::I:::::::::::H:H::::::::::::::::: rrnAC1350 ::V::::::A:::::::::::::::::::S:::::R:Y:E::H:::I:ADE::::::::: Hut1470 :::FF:::::::E:M:L:::::::RPP:V::::T:-:WLE::::S::A:E:--::::::: hla2014 ::VF::::HE::E:::L::::TA:::::V:::ET:-SWLDHD:::::VDPA:ADDETEA: consensus RDAIDRLARDPDLRERLGENARETAEEHSLDRVGEELVSTYEDV--L-G----------- #oth 542242.461.2..5...32.2221341312212331424.4734343235454333322 Hbo2791 KNH:KL:QN::E::K::::::::L::QFTIGA::K::E:V:QTTV:-:-::::::::::: HQ2500A ::::NC:VN::T::S::::::KA::H::D:EG::DQ:AE::KT:ITATEAGHEITSTDIT VNG0600 ::::::::D::E::T:::::::::::S:::::I::::A:I::CL::RD:DVASAVAATEG Hmu1869 V::LE::EAN:::::::::::KA::R::G::::::Q:TDI::R::::D:DVPEAVGER:: NP3216A EA::::::S:::::A:::DT:AT::R::G::::A:::RDA:S:AQR:A:AEHTTD::::: Hut0466 :E:VE:::E::E:::::::::::::::::::::::::::V::AL:::D:RDPIED::::: HVO_1168 :R:L:L::::::::R::::::::::AK:::::::DR::E::::A:::A:RLEG::::::: rrnAC1350 :E:LE:::EN:::::::::::::::R:::::::SRR::E:::EL::A:-::::::::::: Hut1470 T:PL:::-:::E::::::QR:A:RS:AFT::AI:DD::DL:RQ:LSN:-::::::::::: hla2014 A:::R::-T::T::::::S::AARS:SF:::AIA:RYR:L::S:::-:-:::::::::::