|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1830 | HVO_A0176 | VNG0669 | Hut0141 | Hmu1058 | rrnAC0049 | hla0215 | NP2440A | HQ1494A | HVO_1005 | Hbo0499 |
1061 | HVO_A0176 | 2039 | 927 | 996 | 928 | 934 | 1007 | 946 | 886 | 983 | 966 |
1246 | VNG0669 | 927 | 1830 | 1108 | 1059 | 1070 | 1117 | 1151 | 1075 | 1128 | 1146 |
1415 | Hut0141 | 996 | 1108 | 1950 | 1314 | 1333 | 1331 | 1310 | 1132 | 1242 | 1310 |
1382 | Hmu1058 | 928 | 1059 | 1314 | 1847 | 1369 | 1232 | 1210 | 1120 | 1206 | 1278 |
1420 | rrnAC0049 | 934 | 1070 | 1333 | 1369 | 1829 | 1227 | 1263 | 1140 | 1193 | 1257 |
1441 | hla0215 | 1007 | 1117 | 1331 | 1232 | 1227 | 1839 | 1313 | 1155 | 1339 | 1311 |
1459 | NP2440A | 946 | 1151 | 1310 | 1210 | 1263 | 1313 | 1910 | 1233 | 1347 | 1331 |
1376 | HQ1494A | 886 | 1075 | 1132 | 1120 | 1140 | 1155 | 1233 | 1848 | 1412 | 1386 |
1560 | HVO_1005 | 983 | 1128 | 1242 | 1206 | 1193 | 1339 | 1347 | 1412 | 1839 | 1547 |
1566 | Hbo0499 | 966 | 1146 | 1310 | 1278 | 1257 | 1311 | 1331 | 1386 | 1547 | 1852 |
298 symbols consensus ------------------------------MSRAGRIRAEATAAWRAFLRRRTAVFFTFF #oth 11111111111111111111111111111122353.232.3212542.1..........1 HVO_A0176 MSATEAGGTDETSPAAETKQTGDGGRSRALAGATR:V::::V:ET::::::::::::::: VNG0669 ::::::::::::::::::::::::::::::::A:::V:::::G:M:T::::::::::::: Hut0141 ::::::::::::::::::::::::::::::V::L:::TS:TR::T::::::::::::::L Hmu1058 ::::::::::::::::::::::::::::::V::V:::G::L:::RK:::::::::::::: rrnAC0049 :::::::::::::::::::::::::::::::::L::LT::TR::SL:::::::::::::: hla0215 :::::::::::::::::::::::::::::::::F:::TT:::::A:S::::::::::::: NP2440A :::::::::::::::::::::::::::::::::::::A::TR:::Y::V::::::::::: HQ1494A :::::::::::::::::::::::::::::::T:HS:::::F::::H:::::::::::::: HVO_1005 ::::::::::::::::::::::::::::::::L:A:V:S:FV:S:HS::::::::::::: Hbo0499 ::::::::::::::::::::::::::::::V:SL::V:::F::S:HS::::::::::::: consensus FPVIIVVIFGALVQTQPT-GGGLFAEPPAYYVPGYLAVVVLFTPLSRVGSEVARHRDGNR #oth ..23111..12..3.321131...221541.311..21..11........11..2.323. HVO_A0176 :::F::L:::V::K:GA::-::::SRSDT::L:A::G:::VL::::::::T:::N:ASR: VNG0669 :::VLI:::AG::R::GGSSA:::SQ:TG::L:A:::T::::::::::::::::Y:AD:: Hut0141 ::LL::L:::::::::::::::::T::::::::::::::::::::::::::::::::DR: Hmu1058 ::LL:::::::::::R:G:D::::T:S::F:::::::::::::::::::::::::::::: rrnAC0049 ::::::::::V::::::G::::::T:::SF:A:::::::::::::::::::::::::::: hla0215 ::::L::::::::::::::::::::::AG::I:::::::::::::::::::I::::::G: NP2440A ::::LIL::::::G:D:::::::::::AG:::A:::::::::::::::::::::::S::: HQ1494A ::A::::::::::::::::::::::::R:::IA:::S:::::::::::::T:::Y:S:S: HVO_1005 ::A::::::::::::::::::::::::KE::IA:::::::::::::::::TI::::::S: Hbo0499 ::::::L:::::::::::::::::::::::::::::::::::::::::::TI::::E::: consensus FEKLATTPLSRAEWLLAQTLVNVVVIGLAALLLLGLMVLVTGASIPLSPALLA----FVA #oth .........1.5...42121...22.13.2312131523112355433243343432124 HVO_A0176 :::::::::::L:::S:HAA:::AL::::SV::V:VLAA:GDLGAAP:LGGD:LVVA:LV VNG0669 :::::::::::::::A:HA:::::L:V:::-AV:VVAL:L:::NFTV::W:AF::::::P Hut0141 ::::::::::::::::S::::::AI::V::V:V:AV::A::::TVAP::W:VP:::::L: Hmu1058 :::::::::T:P:::VG::::::G:::::S::V::V:::L:::::VVT::TVVLTAL::: rrnAC0049 :::::::::T:T::::::::::::I::I:G::I:::::WL:::T:RP:GL::P::::::G hla0215 :::::::::::V:::::H:::::AI::A:S::I:::VLA::D:EPVV::::A:LPV:::: NP2440A :::::::::::::::F:::::::::::::S::I:::VL:::D:AFTF:LLVVP::::Y:: HQ1494A :::::::::::G::::::S::::::::I::G:::I:S::::NTTL::NLTT:FIIP::II HVO_1005 :::::::::::::::::HS:::::::::::::::A:SA:::::::::T::T::VVP:::: Hbo0499 ::::::::::::::::S::::::::::::::A::V:T:V:::V::::R::T:SIVA:::: consensus LGVALFCGLGAILGSLADSQDGVIAASNAIALPLLFLSETFVPPALLPAWFRPALNLSPL #oth 3122...12.132.241111..1.....2211.111.11...33311.3113133521.. HVO_A0176 V:I:::::::SLV::::::E:::::::::VGI:MVL:AD::::ASR:::AL::VIDAL:: VNG0669 AASV::::I:::::::::G:::A:::::G:::::::::::::Q:::F::::::L::A::: Hut0141 I:::::::I::L:::FT:::::::::::TL::::::::::::::::::E::::LIE:::: Hmu1058 V:::::::V::L:::Y::::::::::::G::::::::::::::TS:::G:LPTW:--::: rrnAC0049 :::::::AV::M::::::::::::::::GL:::::::::::::QT:::::LPTW:--::: hla0215 VA:::::::::L::A:::::::::::::TV::::::::::::S:D:::E::L::VAA::: NP2440A ::::::::::::::RI::::::A:::::G::I::::::::::::::::E::V:L:D:::: HQ1494A :::V::::V:::I:RV:G::::::::::::::::::::::::T:S:::V::::V:G:::: HVO_1005 :::T:::::::VI::V::::::::::::::::::::::::::T:D::::::V:::::::: Hbo0499 :::T::::::::::RV::::::::::::::::::::::::::T:D:::::::::M::::: consensus TYFARGVRAATY-----GGGD----WLG------NLAVLAVLAVVFFAAGARALPRTD #oth 1.11..3.1333212234514111154433312231211435322513311422.211 HVO_A0176 ::::::::::V-:::::A::E::::L:TAVF:::D::::CGFT:AL::LS::L::WRE VNG0669 V::::::::::F:::::T:::::::GVVF::::::AG:VL:::::A:GV::ALI:W:E Hut0141 :::S:::::VVTDPGAGVE:TVVAV:PAGPDPAA:::I:SM::L:T:GL::LT::::: Hmu1058 :::S:::::VA-:::::TR::::::VA:GVE:::H::::T:VG::V:F:::L:::::: rrnAC0049 :::S:::::::T::::::T::::::A::::::::P::::T:C:::G::I:::L::::: hla0215 ::::::T::II::::::EP:A:::::::::::::D::::S::::A:L:L::Y:I:::: NP2440A ::::::L:::::EPVANT::T::::G:VGSDPYL::V:::AG:::::::::Y:::::: HQ1494A ::I:::I:SV:::::LEATTA::::P::::::::::G:VT:I:IIA:L::T::V:Q:: HVO_1005 :::::::::L::::::::::G::::::T::::::::::::A:::::::::TV:I:::: Hbo0499 :::::::::V:T::::::S::::::PWS:::::::::I::::S::::::::Y:I::::