|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1725 | HQ2005A | Hut1154 | VNG2490 | hla0539 | rrnAC2895 | Hmu2798 | HQ3438A | NP0702A | HVO_0095 | Hbo1401 |
988 | HQ2005A | 1806 | 608 | 654 | 710 | 885 | 868 | 761 | 793 | 810 | 770 |
991 | Hut1154 | 608 | 1836 | 835 | 788 | 783 | 861 | 858 | 887 | 806 | 806 |
1018 | VNG2490 | 654 | 835 | 1870 | 806 | 823 | 891 | 887 | 834 | 914 | 859 |
1099 | hla0539 | 710 | 788 | 806 | 1655 | 910 | 890 | 853 | 995 | 888 | 867 |
1287 | rrnAC2895 | 885 | 783 | 823 | 910 | 1831 | 1254 | 950 | 1064 | 1026 | 907 |
1288 | Hmu2798 | 868 | 861 | 891 | 890 | 1254 | 1764 | 892 | 1051 | 999 | 929 |
1116 | HQ3438A | 761 | 858 | 887 | 853 | 950 | 892 | 1813 | 886 | 1017 | 1046 |
1249 | NP0702A | 793 | 887 | 834 | 995 | 1064 | 1051 | 886 | 1732 | 1013 | 902 |
1263 | HVO_0095 | 810 | 806 | 914 | 888 | 1026 | 999 | 1017 | 1013 | 1734 | 1139 |
1165 | Hbo1401 | 770 | 806 | 859 | 867 | 907 | 929 | 1046 | 902 | 1139 | 1722 |
276 symbols consensus ---------DRDRPE----------------YGETWVYESIVGALPGIDLPDRAAIAIQL #oth 12222244547764611111111111111112122.1...11122..2423643.331.2 HQ2005A :::::::MTTANQK:::::::::::::::::F:::::::::IS::::::I:NTL::G::: Hut1154 MTPRQPDGR:VSD:R::::::::::::::::SNQR::::::::SI::VS:SRG::LVL:: VNG2490 ::::::MSDS::P:PSDYQEPTSTAHAAGGV:::::::::::::I::::IS::L:VL::F hla0539 :::::::::--VSRN:::::::::::::::::::M:::::L::GI::L:ISR:L:V:::F rrnAC2895 ::::::MSG:SA::D::::::::::::::::::::::::::I::::::R::TW::M:::: Hmu2798 ::::::VSQ::RPLR:::::::::::::::::::::::::::::::::S::AW::V:::: HQ3438A MARSSAHAGTESS:-::::::::::::::::::D:::::::I::::::E:S:TE:::L:: NP0702A :::::::::---M:::::::::::::::::::::::T:::::::V::::V:P:::::::I HVO_0095 :::::::::MN:A::::::::::::::::::::::::::::::::::VRIGEAG:::L:I Hbo1401 :::::::::-MT:TQ::::::::::::::::F::::::::::::::::H:T:GE:::L:: consensus VLFEVAVLALAWYYDLWAAAVAGTVAVVVAAAGSVEMLRIGALTRRLDVPAAYRRLLFGS #oth 33..421232234134342332.121142.23..23.2221464.4553.661242..21 HQ2005A :F::T::::F:VWDNNG:I:IV:SA::LL:TL::::::::SR:V:SRA::TS:K:::::: Hut1154 :I::AG:V:::AG:GR:GSLP:::::::::S::::F::T::RR:::::::EQ:THT:::T VNG2490 :::::G::VT:AV:::PG:ILP::A::L::::::AF::D:::RA:GPG:::R::Q:::A: hla0539 :::::G:V::G:::G::D:V:::::::A:::V:::::H:L::IN:::PT:P:HK:::::: rrnAC2895 LI::::II::S:::EV:S::I::::V:F::TI::A:::::ST:I::I:::PT::A:::A: Hmu2798 LV::LG::V::A::::::::::::A::::::I:::::::::T:V::I:::GD::D:::S: HQ3438A G::::::IV:SIG:GIES:ILP:::::FE::V::GA:Q:L:RG::E::L:QS::QF:::: NP0702A AV::G:::L:::::G::S:::::::::A:::L::A:::::::AV::T:P::::::::::T HVO_0095 AV::::::VF::V:::::::::::A:I::::::::V:::M:EW::AAR:::P:::::::: Hbo1401 G::::F:VFF::A::::E:VLP:SI::G:::V:::V:::M:QT::ETNL:D::T:::::: consensus SIEVVLGVLAFVALVTHLFVFDPRQSGETLLARLFGPEPPILVVYLTLLVLWDLCYRIGT #oth 31.2..1112121.3.1.22321354363256321.343.3322224.111..22..... HQ2005A KV:T:::::VY:::I::::::E:Q::VRP::HS:L:AN:::V:M:VL:::G::IS::::: Hut1154 G::I:::LV::F::::Y:::L::GSG:::V:TG:L:EPL:APA:FF::V::::V:::::: VNG2490 ::::::::VSY:L:M:Y:::W:::D-:A::V:G:L:EQ::VIPSA:A::::::V:::::: hla0539 :::I:::::::I::::Y:IAW:-----GA::D:::::D:::P::::S::I::::T::::: rrnAC2895 NV::::S:::YI::L::::::::QV:SMP::G::::::::V::::::::I:::VS::::: Hmu2798 NV::::S:::YI:::::::::::Q:G::::VG:::::DQ:::::::M::::::V:::::: HQ3438A ::::::::::::::::::::::::GT:M:IIESFL:EN:::::::::::I:::::::::: NP0702A ::::::S:::::::::Y:VRLS:---:SS:-:TV::::A:LP:::::::::::::::::: HVO_0095 :::::::::::::::::::::::::P:TP:MTT:::::::VV:::::::::::::::::: Hbo1401 ::::::::::::::::::::Y::::::T::FVS:::R:::VI:::::::::::::::::: consensus GWWAAVVGLWRSARYR----------FDPETARRLRRADAENIGFGLAQLVLVPFVLDQP #oth 2..11232..1153442211111111223312664223134243.263.2322.126562 HQ2005A N:::SLL::::AG:::ISNEGSHEFNL::::::L:::::S:TAL:::L::SIA:VLKTGS Hut1154 ::::SLI:::::LWLSEA::::::::L:R::VDE:::I::IT:::AWI::S:::::VGH: VNG2490 :::::::A::::LTQS::::::::::LQ:A::S:MAGV:KRTL:::T::A::L:::WGH: hla0539 S::S:::A:::AVHVD::::::::::LS:AATS:A::L:::::A:SAL:::::::L:SE: rrnAC2895 ::::S:T::::::::::::::::::::::::::VFM:::L:IW:::VL:::::::::::: Hmu2798 :::::ITS::::::::::::::::::::::::AV:::::L:IL::::L:::::::::EFR HQ3438A S::::::A::::W::E::::::::::::S:::GK:::L::L:A::::T:VAM::::I:R: NP0702A ::::SL:::::::::::::::::::::S:AA:GQF::I:::T:L::F:::L:::::TEY: HVO_0095 S:::::::::GAI:::::::::::::::GP::ETV::VNLL:V::AV::VL:L:::A::: Hbo1401 S::::I:S::G:L:FT::::::::::V:ST::QT::V:::W:VI::I:::A::::I:N:R consensus VLLAAVVGHVVAVTVVSGAAAVLLRR---------- #oth 3.251142..2.134.35413623676654122211 HQ2005A ::QNVLII::I::VI:::T::I:MSPSFY::::::: Hut1154 I:V:::::::::I:L::::SILV:H:MR:::::::: VNG2490 L:VF::A::::::I::TTVSLSV::N:::::::::: hla0539 :::G::::::L::AI:CS::I::S--:::::::::: rrnAC2895 :::::L::::I:::A:TAVSVG:::YRSRTTAVSRS Hmu2798 ::::::LA::::::::MSLSVF::G:QTTA:::::: HQ3438A :::T::G:::I::IG::L::L:T:DEIDVSTT:::: NP0702A L:V::L::::L:::::::SSIL::W:REHVTASA:: HVO_0095 :::L::G::::::::::VT::A:T:T:::::::::: Hbo1401 M::L::A::::::::::TV:::TM:IE:::::::::