| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3528 | hla2225 | hla2418 | VNG0264 | NP5198A | HQ1217A | Hut1902 | rrnAC3325 | Hmu0801 | Hbo0790 | HVO_0743 |
| 2559 | hla2225 | 3574 | 2188 | 2234 | 2341 | 2241 | 2288 | 2353 | 2376 | 2336 | 2350 |
| 2557 | hla2418 | 2188 | 3811 | 2121 | 2310 | 2365 | 2219 | 2344 | 2395 | 2381 | 2464 |
| 2633 | VNG0264 | 2234 | 2121 | 3523 | 2224 | 2362 | 2354 | 2453 | 2381 | 2398 | 2424 |
| 2796 | NP5198A | 2341 | 2310 | 2224 | 3476 | 2407 | 2622 | 2592 | 2651 | 2499 | 2588 |
| 2833 | HQ1217A | 2241 | 2365 | 2362 | 2407 | 3498 | 2545 | 2584 | 2570 | 2723 | 2842 |
| 2914 | Hut1902 | 2288 | 2219 | 2354 | 2622 | 2545 | 3485 | 2784 | 2873 | 2536 | 2619 |
| 3038 | rrnAC3325 | 2353 | 2344 | 2453 | 2592 | 2584 | 2784 | 3533 | 2963 | 2691 | 2831 |
| 3105 | Hmu0801 | 2376 | 2395 | 2381 | 2651 | 2570 | 2873 | 2963 | 3522 | 2734 | 2832 |
| 2996 | Hbo0790 | 2336 | 2381 | 2398 | 2499 | 2723 | 2536 | 2691 | 2734 | 3511 | 2929 |
| 3098 | HVO_0743 | 2350 | 2464 | 2424 | 2588 | 2842 | 2619 | 2831 | 2832 | 2929 | 3526 |
488 symbols consensus ----------------------------------MGLFDRLRGDDDPRVAFFGIDGVPFS #oth 1111111111111111111111111222222212......11.6.42..1.3.1..1.23 hla2225 :::::::::::::::::::::::::MSARSHPTT::::::::::::E::V:L::::::YD hla2418 MSVGGCQWEGVGQPRPRRTESDVNSFALHDGCTP:::::::::N:T:::::I::::L:HR VNG0264 :::::::::::::::::::::::::::::::::::::::::::S:AG::::V:::::::: NP5198A :::::::::::::::::::::::::::::::::::::::::::G:G::::::::::::Y: HQ1217A :::::::::::::::::::::::::::::::::::::::::::E:H:::::V:::::::: Hut1902 ::::::::::::::::::::::::::::::::::::::::I:::::::::::::::::Y: rrnAC3325 :::::::::::::::::::::::::::::::::::::::::K:::A:::::::::::::: Hmu0801 ::::::::::::::::::::::::::::::::::::::::I::::G:::::::V::::H: Hbo0790 :::::::::::::::::::::::::::::::::::::::::::Q:::::::I:::::::: HVO_0743 :::::::::::::::::::::::::::::::::::::::::::K:H:::::I:::::::T consensus LIADHPDEFPNLAAIAEAGSAGAIDSIVPPESSACWPALTTGVNPGETGVYGFQDREVGS #oth .2421312.122433135.41.311.1..........1..1.1...2..........31. hla2225 :VQN:::V:E::TD:::T::::RLE::::::::::::S::::K:::S::::::::::ID: hla2418 :V::N::T::T:ST::DK:DG:P:::V:::::::::::::S::::::::::::::::::: VNG0264 ::R::::T::::HDAMA:::G:::E::::::::::::S:::::::::::::::::::T:: NP5198A :V::NEET:E::T::::N:GG:::::::::::::::::::::::::::::::::::::D: HQ1217A :L::N:E:::TF::L::E:AG::::::::::::::::S:::::::::::::::::::::: Hut1902 :::E:DE::EH:N:L:AE:AG::::::::::::::::S:::::::::::::::::::I:: rrnAC3325 ::DE:::V::::TEM:SD::::P:::::::::::::::::::::::Q::::::::::::: Hmu0801 :::::Y:::E:::::::D:T::P::::::::::::::::::::::::::::::::::I:: Hbo0790 :L::N::::::M:DL::T::::::E::::::::::::::::::::::::::::::::N:: HVO_0743 :LSE:::::::F::L:D:::::D::::::::::::::::::::::::::::::::::::: consensus YDTYVPMGRDVQATRLWDRVTDAGRDATVMNVPVTFPPQRNVQRMVSGFLSPGVDKAAYP #oth 21......21.1.1.2.1..332124...1........2131..22..1...2223.221 hla2225 :E::::::KH:S::::::::::D::::::L::::::::SSRI::Q:::::::SI:A:SSD hla2418 :::::::::::::::V:::::E::LN::::::::::::::T:::::::Y:::D:::::H: VNG0264 :E::::::Q::::::V:::::::::::::::::::::::::::::S::::::DIE:::H: NP5198A ::::::::Q::::K:::T::N:T::E:::L::::::::N:DI::NA:::::::LK::::: HQ1217A D::::::::::::::::::::N:D:M:::::::::::::::I::::::::::S:E::TH: Hut1902 AE::::::::::::::::::QS::::::::::::::::::D:::::::::::::EE:::: rrnAC3325 ::::::::::::::::::::::D::N:::L:::::::::::::::::::::::::::::: Hmu0801 ::::::::::::::::::::A:D:G::::L:::::::::::::::::::::::::D:::: Hbo0790 :E:::::::::::::I:::::::::K::::::::::::::::::::::::::S::::::: HVO_0743 :::::::::::::::V:::::::::K:::::::::::::::::::::::::::::::::: consensus DELRDALEDSDYRIDVNAKLGHDDDKTAFIEDAHKTLDARFEAFKHYIDQDDWDLFFGVF #oth 222236.5463.211.1.....32..32.312.34.212.412.431233...1..1... hla2225 :SV:QV:::H:::::::::::::::::E:::N::A:::::HDV:T::L:::::::::::: hla2418 E:::KY:TE::::LS:::::::RK::AE:::Q:RQ:::::A:::SR:VEM::::::V::: VNG0264 P:FA::::AT::::::::::::::::A:::::::E:I:::Q:::LE:::A:::::::::: NP5198A ::::ET:::L::K:::::::::KE::S:::::::R:::::::::::::E::::H:::::: HQ1217A ESFA:D:AAA::::::D:::::::::S::M:N:YE:V:R:::::TDI::R:::::::::: Hut1902 ::::ET::GLE::::::::::::E:::D:LD::YE::EK:::::::::T::::::::::: rrnAC3325 :::::N:Q::::::::::::::::::SD:V:::::::EK:Y:T::::VE::::::::::: Hmu0801 :::G:Y:D:N::::::::::::SE::EE::::::::::R:::::::::E::::::::::: Hbo0790 :DF::H::S:G:I:::::::::K::::E:V:N:N::::R:::::S::LQ::::::::::: HVO_0743 :DF::::SEMN:K::::::::::E:::::M:::R::::R:Y:::ER:::::::::::::: consensus MTTDRVNHFLFKDYEEDGEYKEAFLEFYRKVDDYLGEIRDALPDDVTLVVASDHGFTSLD #oth 111..1....211.243242324132..331.511.41144132211121111...2413 hla2225 :S:::::::::G::AN:::::DD::D:::TL:G:I:::::::D::T::I::::::::E:V hla2418 S:P::I::::WG:::DG:P:R:DM:A::AAL:EHI:N::K:::N::R:::G:T:::AR:R VNG0264 :S::::::::::::::H:DNEA::F:::E:::R:I::::A:IA:::::::::::::::E: NP5198A ::::::::::Y:::VT::::::E:::::A:L:Q::::L:SL:SEET:M::::::::MQ:: HQ1217A ::::::::::::::::ER:DR:L:M::::T::E:I:R::EQ::::::::I:::::::T:E Hut1902 ::::::::::::H:::::::::E:I::::T::E::::LGAL:D::::MM::::::::::: rrnAC3325 :::::::::::::::R:::NQD::F:::KQ::A:::DL::R::::::M:::::::::::: Hmu0801 ::::::::::::H:::::::::E:::::::::::::RL::L:A:N::M:::::::::::: Hbo0790 :::::::::::::::NETSD::K:MA::::::::::Q::EM::E:::::I:A:::::::: HVO_0743 :::::::::::::::R::KN:D::M::::T::::::R::::::E::::I::::::::::: consensus YEVHCNEWLEEEGWLSYD-DDDHEELGDIDDDTRAYSLIPGRFYINLEGREPRGSVPEDE #oth 21122.52.232...312141.145.3.1242231..11....11.211..14.4.1211 hla2225 W::N::QF:AD::::::::G:::DS:A::::EA:::::::::::L:::::::E:V:::S: hla2418 :D:Y::::::R::::::EGG:::GS:S::AG:A:::::V:::::L:V:::::D:V:::S: VNG0264 ::::L:S::ADQ::::F::SP:P:G::::S:::QV::F::::::L:R:::::::::AA:D NP5198A H::N::V::::N::::F::::::NS:S::A::::::::::::::L::K::::N:T::Q:: HQ1217A ::L:::A::::Q:::::A:N:::D::A::SSES::::::::::::::::::AH:::::S: Hut1902 ::::L::::Q:::::AF::T::P:::::L:AS:K::::::::::::::E::AN:G::::D rrnAC3325 ::::F::::Q:::::D:A:T:::S:::::SE::K::::::::::::::::::N:G::::: Hmu0801 ::::L::::Q:::::T:E::::::T:::::ES:K:::::::::::::::::::::::::: Hbo0790 ::::::TL::Q::::::E::::::Q:E::S:::L::::::::::::::::::::A::Q:: HVO_0743 ::::::T::::N:::::E:::::DA:S:::E:SK:::::::::F:::::::::::::QS: consensus YEAVRDELKEKLEALEGPDGRPVADRVVEKEDAFRGDHDDIAPDLVVIPNHGFDLKSGFK #oth 12321321234.13211.1.23.21.1.3214111.1..2.....121.23.....11.3 hla2225 :::::E::RTD::S:T:::::Q:CK:I:DG:TV:D::::E:::::::::AD::::::::G hla2418 :::::E::RAE:::W:::N:N:::K::::R:TV::::::A:::::::::HE::::::::R VNG0264 AD::LA:VSDA:T:::S::::Q:V:::::GDAV:D::::A::::::A:::::::::A::S NP5198A ::S::S:::AD:::M:::::K:::::::T:::::::::::::::::::::T::::::T:: HQ1217A ::DT:::::TM::S::::::NL:::::::R:E:::::::::::::::::::::::::::S Hut1902 :::::AD:R::::G::::::::::::::T:::::::::::::::::::::::::::A::: rrnAC3325 ::S::AN:::::::::::::K:::::::T::::Y:::::::::::T:V::::::::A::: Hmu0801 ::::::::R::::N:T::::N:::::::T::Q:Y:::::E:::::T:V::::::::A::: Hbo0790 :QER::::::M::N::::N::K::::::::::::::N:::::::::IV:::::::::::: HVO_0743 ::D::::::AE:::::::::NK::::::V::::::::::::::::::::::::::::::: consensus GHDDVFG-TGPRNGMHSFDNATLFVDDPDARI-EDADLYDIAPTILDLMDVEYDRTEFDG #oth 24331.315...1...2.1114.3323342511432112.11..1.4.1122332421.. hla2225 :KKS::T:E:::::::K:E:SL:YST:S:LD:::GSN:F:VT::::::::::H:-GD::: hla2418 P::A::DPD:::T:::T:ED:A::I:H:::KV::::::L:V:::L:R:L::D:G::DL:: VNG0264 TPG:::R:H:::::::::E::::VT:A::VS:PSSTN:::::::L::::::Q::SR:::: NP5198A :GEK::T:::::::::::ED:C:::::KQ:T::KN::::::T::::K:L:I:T::N:::: HQ1217A ::ESI:D::::::::::::::::Y::N:AVD::Q:::I::::::::E:::I::S:::::: Hut1902 :SEA:::::::::::::::::C:::E:D:::::SG:::::::::::S::::D:::::::: rrnAC3325 :SE:::::V::::::::::::::M:::::V:::D::::::::::::::L:HDF::AK::: Hmu0801 :S::::::V::::::::::::::::::::::::S:::::::::::::::::DF::::::: Hbo0790 :K::::::Q::::::::::::S:YI:::N:T::::::::::::::::::E:::T::D::: HVO_0743 ::::::::V::::::::::::::Y::::G:V::::::::::::::::::::::S:::L:: consensus ASLV---- #oth 21.34211 hla2225 D::LGA:: hla2418 :::I:::: VNG0264 DT::TADD NP5198A :::::::: HQ1217A ::::RQ:: Hut1902 S::::::: rrnAC3325 S::A:::: Hmu0801 S::::::: Hbo0790 :::ITQ:: HVO_0743 :::IQQ::