|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2541 | hla2597 | Hbo0088 | VNG0639 | HVO_0981 | Hbo0460 | HQ1640A | Hut1393 | Hmu1947 | NP2298A | rrnAC1450 |
2027 | hla2597 | 2643 | 1769 | 1752 | 1891 | 1920 | 1872 | 1774 | 1747 | 1913 | 1855 |
2075 | Hbo0088 | 1769 | 2652 | 1750 | 1985 | 2002 | 1941 | 1833 | 1791 | 1891 | 1861 |
1956 | VNG0639 | 1752 | 1750 | 2344 | 1892 | 1877 | 1883 | 1869 | 1782 | 1835 | 1858 |
2285 | HVO_0981 | 1891 | 1985 | 1892 | 2575 | 2253 | 2225 | 1924 | 1822 | 1972 | 1967 |
2290 | Hbo0460 | 1920 | 2002 | 1877 | 2253 | 2560 | 2356 | 1889 | 1835 | 1995 | 2013 |
2237 | HQ1640A | 1872 | 1941 | 1883 | 2225 | 2356 | 2599 | 1863 | 1826 | 1956 | 1954 |
2041 | Hut1393 | 1774 | 1833 | 1869 | 1924 | 1889 | 1863 | 2583 | 1875 | 1953 | 2071 |
1961 | Hmu1947 | 1747 | 1791 | 1782 | 1822 | 1835 | 1826 | 1875 | 2384 | 1864 | 1929 |
2189 | NP2298A | 1913 | 1891 | 1835 | 1972 | 1995 | 1956 | 1953 | 1864 | 2600 | 2090 |
2163 | rrnAC1450 | 1855 | 1861 | 1858 | 1967 | 2013 | 1954 | 2071 | 1929 | 2090 | 2567 |
368 symbols consensus ------Q-ALLPETIANLL--G-----LPGTLGQIVAGLVGAALVANLMLTMTAVAGPWA #oth 1124564644222333532111211114535547435323224322444155313211.1 hla2597 ::MGTAPAQ:F::FLVDTF:::::::::::V::EV::S:I:::::::II:AFSGI::::: Hbo0088 ::MHVPLTT:::::::RV:FG::::::A:SLPE:::SA::A:VI::LVP:NCA::V-I:: VNG0639 ::::::-:-----------::-:::::---------------------::::::F::::: HVO_0981 ::::MHLQ:V::D:VSG:::::::::::E:I::DV:G:::::F::::I::I:::F::::: Hbo0460 ::::::-:V:::::::::::::::::::S::V::::G::I::F:I:::L:IQ:::::::: HQ1640A MSALLQSKT:::::::::::::::::::S::::A:IG::I::FVI:::L:VQ:::::::: Hut1393 :::MIL:ATT:TD:::DV::::SLGLDAANP:VVLL:::LA:::::TIV:LNA:L::::: Hmu1947 ::::::-:-----------::-:::::---------MAV:ASGVI:SGL:ALV::S:I:G NP2298A ::::ML:G:P:::RL:E:::::L::::G::PGSTAL:A:L:::I:GT::M:::::::::: rrnAC1450 :::::M:S:P::::L::::::::::LDPNS:AVM:LLS::::G:IGT::M:N::L::::: consensus KRKITAAFTDRIAVNRIGPFGLLIIVADAVRLLSKELIVPEGVDRPAWDLAPIVIPFSAL #oth ...1....1..1111.4..4.132.121221..1...11.111...11.11.223231.1 hla2597 :::::::::::::::::::::::::P:A::Q::A::::I:::::::T::I:::LL:A::M Hbo0088 :::V:::::::::P::T::::::V::T:VF::::::::::D::::::Y:IG::LV::::: VNG0639 ::::::::::::S:::V::W::GT::V:S::::::::VI::::::::Y::::::LAG::: HVO_0981 ::::::::A::::::::::::::T::T::::::::::V::::::::::::::M::::::: Hbo0460 ::::::::::::::::V::::::V:::::::::::::V:::::::::::IG:L::::::: HQ1640A :::::::::::::::::::::::V:::::::::::::VI:::::::::::G:L::::::: Hut1393 ::::::::::::S::::::M:IGT::V:S:::::::::I::KA::::Y:::::LLAS::: Hmu1947 ::::::::::::::::H::A:I:::P:::L::::::::::::::::::::G:LIMV:::: NP2298A :::V:::::::Y::::L::::II:::::::::::::::::D:::::T:::::::LA:::: rrnAC1450 ::::::::::::::D::::Y::F:::::::::::::::::::::::::::::LI:AST:: consensus LGFAVIPMGN----GIQLADPETGLAYVFAAASIASLGLVMAGYASNNKYSLLGGLRAVA #oth 21.1.....212222112....2.1121..42.2112113.4..2....1.11.1...1. hla2597 :::S:::::QIGPLN:H:::::V:::L:::F:::::VS:::::::::::::::::::::: Hbo0088 :::::::::SIFGIEL:::::::::::A::V::::T:::T:C:::::::F::I:::::I: VNG0639 FA::::::::::::::::::::V::VF:::I::::::::I:G:::::::::::::::::: HVO_0981 ::::::::::::::::::::::::::FA::::::::::I::T:::::::F::I:A::::: Hbo0460 ::::::::::::::::H:::::::::FA:::S::::I::::M::G:::::::::::::I: HQ1640A :::::::::S::::::::::::::IVFA:::G::::V::I:M::S::::F::::::::I: Hut1393 :::::::::S:::::::V::::I:::::::V::::::::L:::::::::::F:::::::: Hmu1947 A::::::::::::::::I::::::::::::M::V::::::::::S::::::F:::::::: NP2298A :::::::::S::::::H:::::V::V::::I::::::::::::::::::::::::::::: rrnAC1450 ::::::::::::::::H:::::V:::::::V::TT:I::::::::::::::F:::::::: consensus QNLAYEIPLVLTAASVVIFAGSLQMSEIVA-AQAEPLLSIAGVTIPQWFAFVNPFAFVLF #oth 2.1......12112..22.1.1.13.31.114.442143333441.4.1..1.....1.. hla2597 :::::::::IV::M:::V:::T::I:GV:G:::T:T:VT:::FD::A::::::::::::: Hbo0088 A:::::::::V::::::L:T:::::::::::T:TN:::TVM:::::S:Y::::::::::: VNG0639 ::I::::::::::::::L:T:T::L:::::IQ:NTT:AT::::R::A::::::::::::: HVO_0981 A:I:::::::V::::::::::::R:::::::V:::::::V::::::T::::::::::A:: Hbo0460 A:::::::::I:G::::::T::::::H::::E::N:::TV:::::::::::::::::::: HQ1640A S:I:::::::I:G:::IL:T:T::T:A::::Q:S:::I:::::::::::::::::::::: Hut1393 ::::::::::::G::::::::::RL::::::::QGTF::LGP:A::N::::I:::::A:: Hmu1947 :::::::::I::GM::AL:::T:RL::::::::STT:F:LG:LA::S:Y::::::::::: NP2298A :::::::::::I:V:::::::::::::::::::::::VDLGVA:::::Y::::::::::: rrnAC1450 :::::::::I::G::::::::::::::::::::QQS:IG----PL:S:Y::::::::::: consensus VIANLAEVGRNPFDIPEAPTEIVAGYQTEYSSVYFVLIYLGEFIHIFLGGAIIATLFLGG #oth 23..11.1......2......1.1.1......1.1..2.11..2.1......3112.... hla2597 LT::M::I:::::::::::::::G::::::::A::::F:::::V::::::::LSVV:::: Hbo0088 L:::::::::::::A::::::L::::::::::::W::::M:::::L::::::L::V:::: VNG0639 :V::::::::::::T:::::::::::::::::A::::F:::::::::::::::::::::: HVO_0981 ::::::::::::::::::::::::::::::::::::::::::::::::::::A::::::: Hbo0460 :L::::::::::::::::::::::::::::::::::::::::::::::::::A::::::: HQ1640A ::::::::::::::::::::::::::::::::::::::::::::::::::::A::::::: Hut1393 ML:::::::::::::::::::::::::::::::::::F::::::::::::::V::::::: Hmu1947 MV:::::::::::::::::::::::W:::::::::::A::S::::::::::::::I:::: NP2298A L::::M:::::::::::::::::::::::::::::::::::::L:::::::::::::::: rrnAC1450 M::::::::::::::::::::::::::::::::::::::::::::::::::::::I:::: consensus PAGP--VLPGFVWFLIKIWAVFLFTQWARSAIPRLRIDQLIEIGWKGMLVLSFANLLLTA #oth 12..11322111..31.112211....3.1.2..1.1..1121...11...112..3... hla2597 AS::GPESIS:I::VV:V:GF::::::::A::::V:::::::::::::::::::::V::: Hbo0088 :::::::::::::::V:::::::::::::::V::::::::::V::::L:::::V:::::: VNG0639 :G::::F:::::::T::::::YF::::C::::::V::::::G:::::L::::::::V::: HVO_0981 ::::::::::::::T:::::F::::::::::V::::V::FL:::::::::::::::V::: Hbo0460 ::::::F:::::::I:::::FY:::::M::::::::V::FLDV:::::::::::::V::: HQ1640A :::::::::::I::T::::LFYF::::V::::::::V::FLDV:::::::::::::A::: Hut1393 ::::::L:::I::::::::G:::::::::::V::V:::::::::::V::::ALI:::::: Hmu1947 ::::::::::I:::::::VGIY::::::::::::V::::::::::::L:::A:::::::: NP2298A ::::GPEAL:I::::V:::::Y:::::::::L::::::::::V::::::::A::::I::: rrnAC1450 ::::::::::I::::::::G:::::::::::V::V:::::::::::::::::L::::::: consensus IIVGVIA- #oth 311.1323 hla2597 V::::::: Hbo0088 V:::ML:T VNG0639 TAL::TGL HVO_0981 :::::::: Hbo0460 :::::::: HQ1640A :::::::: Hut1393 :::::V:: Hmu1947 G::::::: NP2298A :::::L:: rrnAC1450 V::::TVQ