|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3476 | HQ3643A | NP0076A | NP4376A | Hbo1259 | rrnAC2780 | Hmu3153 | Hut2239 | HVO_0239 | VNG2093 | hla0901 |
2906 | HQ3643A | 3472 | 2789 | 2697 | 2921 | 2719 | 2728 | 2677 | 2750 | 2424 | 2469 |
3141 | NP0076A | 2789 | 3491 | 3062 | 2973 | 2861 | 2868 | 2896 | 2979 | 2517 | 2595 |
3067 | NP4376A | 2697 | 3062 | 3453 | 2880 | 2832 | 2841 | 2824 | 2914 | 2508 | 2537 |
3143 | Hbo1259 | 2921 | 2973 | 2880 | 3487 | 2967 | 3001 | 2882 | 2958 | 2480 | 2544 |
3079 | rrnAC2780 | 2719 | 2861 | 2832 | 2967 | 3674 | 3157 | 2936 | 2936 | 2473 | 2468 |
3095 | Hmu3153 | 2728 | 2868 | 2841 | 3001 | 3157 | 3428 | 2908 | 2952 | 2490 | 2518 |
3086 | Hut2239 | 2677 | 2896 | 2824 | 2882 | 2936 | 2908 | 3489 | 2985 | 2491 | 2529 |
3153 | HVO_0239 | 2750 | 2979 | 2914 | 2958 | 2936 | 2952 | 2985 | 3512 | 2439 | 2533 |
2580 | VNG2093 | 2424 | 2517 | 2508 | 2480 | 2473 | 2490 | 2491 | 2439 | 3476 | 2797 |
2667 | hla0901 | 2469 | 2595 | 2537 | 2544 | 2468 | 2518 | 2529 | 2533 | 2797 | 3487 |
481 symbols consensus -----------------------TNDNAKTDGGLSAEAQAVLDEIEEKNVDFLRLQFTDI #oth 111111111111111111333435657574223.144123.212.113311......1.. HQ3643A ::::::::::::::::::MTDENKS:S:T::::::::::R:I:Q:::GD:E::::::::: NP0076A ::::::::::::::::::::::M::::VAA::::TK:::::V:::::::::::::::::: NP4376A :::::::::::::::::::::::-----M::ES:TPDEKR:::::::::::::::::I:: Hbo1259 ::::::::::::::::::MTDDNA:SD:V:::::::K::::V::::::E::::::::::: rrnAC2780 MSKCRRKRRNLCANQQGFSSSTAPIGCP:MTSE::EA::E:::::D:::::::::::::: Hmu3153 :::::::::::::::::::::::------MTSE:::D::D::E::::::::::::::::: Hut2239 :::::::::::::::::::::::MTNEQV:::::::::::::E::D:Q:::::::::::: HVO_0239 ::::::::::::::::::VFRKM:E:::L::::::D:::::I:::::::::::::::::: VNG2093 :::::::::::::::::::::::MTNGDSSSSA:TDNER::::D::AQGI:::::::::: hla0901 ::::::::::::::::::::::M:DEH::P::::T:KE:::::::::E:::::::::::: consensus LGTVKNVSIPADQAEKAFTEGIYFDGSSIEGFVRIQESDMRLDPDPSTFAVLPWRKRED- #oth 1.11...111131.....11.........2............4...2..12....55332 HQ3643A :::::::A::VSR:::::KD::::::::::::::::::::::K::::::::::::S---: NP0076A I:::::::V:::::::::::::::::::::::::::::::::I:::E:::I::::::::: NP4376A :::I:::AV:::::::::::::::::::::::::::::::::K:::::::I::::::::: Hbo1259 :::::::AV::T::::::::::::::::::::::::::::::K:::E:::I::::D---: rrnAC2780 :::I:::::T:::::::::::::::::::N:::::::::::::::::::S:::::ENVEG Hmu3153 :::I::::V::::::::::::::::::::N::::::::::::::::E::S:::::NDGE: Hut2239 :::::::::T:::::::::::::::::::D:::::::::::::::::::SL::::TS::: HVO_0239 :::::::::::S:::::::::::::::::D::::::::::::E:::::::::::::K:N: VNG2093 :::::::::::H::::::::::::::::::::::::::::::::::E::::::::SNG:: hla0901 ::V:::::V::H::::::::::::::::::::::::::::::V:::D::::::::SDGED consensus G-ASARLICDVINTSTGEPFEGDPRGVLKRAIERANEMGYTVNAAPEPEFFLFEEDEDGR #oth 11311.2...132111.21.2.1..31..32151.211.1411421.......12.11.2 HQ3643A ::R:::::::::::::::::A::::A:::ET::::::::F:I:TSS:::::::::::::: NP0076A :::::::::::Y:::::::::::::Y::::::D::E::::SI:F::::::::::::DE:: NP4376A ::::::M:::IY:::::::::::::Y:::Q:L:::E::::::::G:::::::::::DE:: Hbo1259 ::R::::::::::::::K:::::::Y:::Q::K:::::::KI:::::::::::::::E:: rrnAC2780 ::S:::::::::D:::::::S:::::::::::::::D::::::::::::::::::::E:: Hmu3153 S::A::::::::D:::::::A:::::::::::Q::E:::::::::::::::::::::E:: Hut2239 S::A::::::::::::::::::::::I::N::D:::::::E::V:::::::::::::::Y HVO_0239 S::AG::::::F::::::::S::::::::::::::E:L::D::V:::::::::::::::: VNG2093 ::G::::::::VDRE-:NA:A:G::Q:::NVLA::DD:::S:SIG:::::::::K:D::N hla0901 :S:A::I:::IVT:E-::::::G::Q::::VLSK:DD:::::SIG::::::::KT:D::N consensus ATTKTNDAGGYFDLAPKDLASDVRRDIIFGLESMGFEIEASHHEVAEGQHEINFEYDDAL #oth ...434.4..............1.21..31..3.1.21........21.1..1.2.11.. HQ3643A ::::::::::::::::::::::I::E::H:::E:D:N::::::::::::Y::::::ES:: NP0076A :::E:A:H::::::::::::::::::::Y:::::D:::::::::::R::::::::::::: NP4376A :::EFS:V::::::::::::::::Y:::A:::::::DV:::::::::S::::D::::::: Hbo1259 ::::::::::::::::::::::::::::Y::::::::::::::::::::::::::::::: rrnAC2780 ::::::::::::::::::::::::::::Y:::D:::D:::::::::Q:::::::T::::: Hmu3153 ::::::::::::::::::::::::::::::::E:::D:::::::::Q:::::::T::::: Hut2239 :::::G:H::::::::::::::::::::::::D:::::::::::::R:::::::T::::: HVO_0239 :::V::::::::::::::::::::::::Y:::::::D:::::::::::::::::T::::: VNG2093 :::TAH:Q::::::::::::::I::E:::T::A:::::::::::::R:::::::K::::: hla0901 :::IPH:N::::::::::::::::KE:::T::E:::::::::::::::::::::K::::: consensus TTADNVATFRAVVRAIAAQHDLHATFMPKPIPKINGSGMHTHISLFTEDGENAFHDEDDE #oth 11...11...2....1.21..1.........23.......1.3...221.2.1.1.31.. HQ3643A :::::I::::T::::::::::::::::::::A::::::::::::::D:N:N::::::S:: NP0076A ::::::::::T:::::::::::::::::::::R:::::::::M:::-::::::::::::: NP4376A ::::::::::::::::::::::::::::::::::::::::::L:::::::::::::G::: Hbo1259 ::::::G:::T::::::::::::::::::::AR:::::::::L::::::::::::::::: rrnAC2780 S:::::::::S:::::::E:::::::::::::::::::::::L::::::::::::::::: Hmu3153 S:::::::::::::::::E:::::::::::::::::::::::F:::-::::::::::::: Hut2239 S:::::::::S:::::::E::::::::::::::::::::::::::::D::::::::G::: HVO_0239 S:::::::::S:::::::E:::::::::::::R:::::::::::::-K::::::::G::: VNG2093 :::::I:::::::::V:E:::V:::::::::GE:::::::S:::::D:::::V:A:N::: hla0901 :A:::I:::::::::V:S:::::::::::::AD:::::::S:::::D:::-:::A:DS:: consensus FNLSETAKQFLAGILEHAPAITAVANPTVNSYKRLVPGYEAPVYVAWSDRNRSALIRKPA #oth .2..2..31131.1.3..2.11.121................1.1...12.....1.1.1 HQ3643A :::::::HS::::V:::::::::I:::::::::::::::::::::::::::::::::::: NP0076A :S::G::RSY:::::::::::::::::::::::::::::::::::::::::::::V:::: NP4376A :D::D::RS::::V:::::::::::::::::::::::::::::::::::T:::::V:::: Hbo1259 ::::::::::T:::::::::::::S::::::::::::::::::::::::::::::::::: rrnAC2780 ::::::::S:T::::K::::::::S::::::::::::::::::::::::::::::::::: Hmu3153 :D::::::::T:::::::E::A::S::::::::::::::::::::::::::::::::::: Hut2239 :::::::::::::::D::::::::T::::::::::::::::::::::::::::::::::: HVO_0239 :D::D:::S:V::::D:::::::::D::::::::::::::::::I::::::::::::::: VNG2093 :::::::Y::MG:V::::::F:::T:::::::::::::::::::I:::GV:::::::V:D hla0901 :::::::Y::MG:::N::K:F:::T:::::::::::::::::I::::::T:::::V:V:D consensus ARVPAASRIEARFPDPSCNPYLAFAALIHAGLDGIEKDLDCPDPVRENIYEFDEAKREEY #oth .131111.1.3.1.........11.23.2...2.11522122111.11..1..121.31. HQ3643A ::::::::::L:S::::::::::L::I:T:::N::DDG:EA:::I:::::::::ET:M:: NP0076A ::I:::::::L:S:::::::::::::M:::::::::N:::::::::D:::::::DT:D:: NP4376A ::::::::::L:S:::::::::::::M:::::::::N::::::::::::::::::::D:: Hbo1259 ::::::::::::::::::::::::::::::::N:::RG:E:D:::::::::::::::::: rrnAC2780 ::T:::::::::::::::::::::::::::::::V:Q::E:D::::::::D:::E::::: Hmu3153 ::T::::::::::::::::::::::::::::::::::E:::D:::::::::::::::::: Hut2239 :::::::::::::::::::::::::V::::::::V::EI:A:G::::::::::::::::: HVO_0239 ::T:::::::::::::::::::::::::::::::V::G:::::::::::::::::::::: VNG2093 :A-GVSA:F:I:S::::::::::L::V:A::::::DT:A:PG:A:::D::::::D::DA: hla0901 :A-GVSA:F:V:S:::::::::GL:SM:A:::H:::TEA:PG:::::D:::::DE::Q:: consensus GIETLPSNLGEAVDALEADEVIQDALGEHVYEKFVEAKRQEFDEYLVDVSEWELDRYLET #oth ..2...52..3.221.24.2.312...3.2511.32..23.2511223..2..2.1...1 HQ3643A ::D:::G:::::I:::DS:::::G:::D:::D::A:::T::Y::FR::::D::::::::: NP0076A :::::::::::::::::::::VL::::::IS:::::::T:::E::::::::::::::::: NP4376A :::::::::::::::::::::VL:::::::P:::M::::E::G::::E:::::::::::: Hbo1259 ::::::A:::::I:::QE:::V:::::::I::::::::S::Y::FR::::Q::::K:::K rrnAC2780 ::T::::::::::E:::D::::::::::::::N:::::T::HK:::::::D::::::::K Hmu3153 ::T::::::::::::::::::::::::Q::::N::D::T::Y::FR::::D::::::::K Hut2239 ::D:::E:::::L::::D:D::L::::P:TG:::RQ:::::HK::::::::::::::::: HVO_0239 ::::::KD::G::::::E:::::E:::D::F::::::::S::KD::::::Q::::::::: VNG2093 ::D:::GH::D::T:::S:P:M::::::::C:::A::::H:YA::KAS:::::T:::::K hla0901 ::::::P:::A::EE::T:::L:::::P:TS:::A:::S:::S:::TQ::Q::E:::::: consensus F #oth 1 HQ3643A Y NP0076A : NP4376A : Hbo1259 : rrnAC2780 : Hmu3153 : Hut2239 : HVO_0239 : VNG2093 : hla0901 :