| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 1568 | hla1957 | HQ2639A | HVO_1592 | Hbo3249 | VNG0494 | Hut0997 | NP0216A | rrnAC3340 | Hmu1017 |
| 949 | hla1957 | 1931 | 604 | 791 | 869 | 743 | 643 | 603 | 656 | 614 |
| 927 | HQ2639A | 604 | 2001 | 799 | 835 | 689 | 667 | 606 | 625 | 689 |
| 1035 | HVO_1592 | 791 | 799 | 1694 | 1031 | 771 | 704 | 788 | 825 | 797 |
| 1097 | Hbo3249 | 869 | 835 | 1031 | 1870 | 810 | 776 | 727 | 820 | 755 |
| 943 | VNG0494 | 743 | 689 | 771 | 810 | 1604 | 777 | 669 | 687 | 675 |
| 1026 | Hut0997 | 643 | 667 | 704 | 776 | 777 | 1726 | 760 | 808 | 872 |
| 921 | NP0216A | 603 | 606 | 788 | 727 | 669 | 760 | 1598 | 826 | 871 |
| 1016 | rrnAC3340 | 656 | 625 | 825 | 820 | 687 | 808 | 826 | 1679 | 1041 |
| 1031 | Hmu1017 | 614 | 689 | 797 | 755 | 675 | 872 | 871 | 1041 | 1602 |
344 symbols consensus ----------------MTD-------------------------DDAADDEAADAEPDED #oth 111111111111111111211111111111111111232222245463345155544334 hla1957 MTTAWGCRFKYSRGSAV:PSNAFLIEVEAGPLRSATLMHAERLRS:MS::D:V:V:VESP HQ2639A :::::::::::::::::S::::::::::::::::::::::::::ESTESHQT:EPS::S: HVO_1592 :::::::::::::::::S:::::::::::::::::::DPAESVT:AN::A:TDA:SDAAA Hbo3249 ::::::::::::::::::::::::::::::::::::ESPDGRVSES:DA::TT:PDV:GS VNG0494 :::::::::::::::::S:::::::::::::::::::::::::HAEH:A:A:DTDA:EG: Hut0997 ::::::::::::::::::E:::::::::::::::::::::::::TEQD::S:GR:Q:::E NP0216A :::::::::::::::::S:::::::::::::::::::::::::::QGDAV::SSEADE:A rrnAC3340 ::::::::::::::::::E:::::::::::::::::::::::::Q:::::T::TE:STAS Hmu1017 ::::::::::::::::::E:::::::::::::::::::::::::Q:::ET::SSG:A::: consensus DTAADAADAAEREAEA---------------------E------G---------ALAERV #oth 536613554436555541111111111111111111144345464344543222335332 hla1957 :A:::::RTNGTADA:A:::::::::::::::::::::EASSDARADGE::::::::AA: HQ2639A ISGDEDE:EN:::HNMN:::::::::::::::::::::EEKHQTKDTHGSSENPDENNQD HVO_1592 Q::E:::TD:DG::SSA:::::::::::::::::::::SAAEES:ATGDGP:::TV:D:: Hbo3249 ::T:::TA:::QNG::EAAETETAAEKEAEAETAETETAEAEAV:DAANAETTGDV:A:: VNG0494 :AGG:DGEQ:GDDGTS:::::::::::::::::::::-::::::-:::::::::::S::: Hut0997 GEPT:EQI::L::---:::::::::::::::::::::-::::::-:::::::::EQL:T: NP0216A S:SP:EG:DRDPV:--:::::::::::::::::::::-::::::-::::::::::V:::- rrnAC3340 EAQ::GDADL:DVP:DV::::::::::::::::::::NADEVDL:EFDTDE:::D:VD:: Hmu1017 G:ERED:::SGES:SEE::::::::::::::::::::RVDEDADE:::::::::E:I::: consensus AESDAE---ALADEVA----ALRARVDELEDELAE-------ADEEIDELESRLKRKQAD #oth 12613311142.32121111.1253346125244511111114445321.22212131.1 hla1957 ::H:-:::::::R:::::::::E:DFA:TR:::LA::::::::E::VE::T:K:A:VK:: HQ2639A :TTE:S:::S:::Q::KYDE::AVE:KS:TN:YD::::::::QR:R:::::AA:::SK:: HVO_1592 ::Y:DD:::-::A:::::::::E::::D::A:RD:::::::::EATAE::Q:::::T::: Hbo3249 ::Y:D::::-::::::::::::ER::QK::TK::T:::::::KA::A:::TE::::T::: VNG0494 RAL::DNAD::::D::::::::E:::ET:T::::D::::::::ED:VAD:TE:VQT:::: Hut0997 R:A:::::::::::L::::::H:LKIER::S:::DLEETVEGK::::ED:T::::::::: NP0216A ::N:PA:::SV:A:LV:::::::EEAA:::T:---:::::::----R:D::::::::::E rrnAC3340 ::::P::::DI:R:LS:::::::T:::S::SQVEQ:::::::Q:GD:E:::EK::::::E Hmu1017 ::::P::::EI:T:L::::::::T:::G::G:VD::::::::R:AA::D:::K::::::E consensus FQNYKKRAKKRREQIRERATEDLVERLLDVRDNLLRALDQDE----DADIRPGVESTLRQ #oth .3...2.22222331241.1.21.31224..11.6...2.1311113411.3.212.242 hla1957 :S:::Q:::RKQDE:::::S:A::::ITP::ND:::::::E:::::GS:L::::::::EK HQ2639A :E:::::::::EQ:::::::::F:G:IVG:::::V:::E::S::::::::::::::::DE HVO_1592 :::::::::::QS::KD:::::F:::VVT:::::V::::::::::::::::G:L::::KE Hbo3249 :::::::::::QD::::T::::F:::VVT::::::::::::::::::::::::I::::EE VNG0494 :K:::E:::RKQ:E::::::::::::::::::::D:::::E:SESDEDG::E:::L:RDE Hut0997 :::::::M:QK::DEKQ:::::::::::::::::R::::::D::::V::L:D::K:::S: NP0216A :::::::QE:Q::KE:A::::A:::K::E:::::N:::E::A:::::::::E:::A:F:: rrnAC3340 :::::::MD:::::EQK:::::::T:::::::::E:::G::::::::T:::G:::::::: Hmu1017 :::::::M:::::EEKK::::N::SK::::::::Q:::E::::::::V:::D:::::::: consensus FDRVLDDENVEAIDPEPGDEVDPARHEVLMRVDSDQPEGTVAEVHRPGYEMAGKVIREAQ #oth 1232.24.2.36.3.11.331.142.1.13111112.3111311222..2.222.222.1 hla1957 ::E::A::G:::::::::E:::::::Q:ML::E::::S:::H::YE:::::GDR:VS::K HQ2639A :::::E::::TL:N::R::N::::Q::::::::A:L::::::::FQQ::Q:::T::Q::: HVO_1592 :::I:E:::::I::::::TD:::N::::M::::::::AD:::D:FQ::::::D::::A:: Hbo3249 :::I:A::D:ST::::::E::::T::::M:::E:::::::::D:YQ::::::E::::::: VNG0494 :::::ET:G:TE:R:::::S::A:::::M::::::::A::IVD:Y::::::S:R:V:A:: Hut0997 :ETE::R:::TS:E:::::::::E:::::V:M::P::D::I::::::::::::::::T:: NP0216A L:DI::G:G::::E:D::T:T::K:::::LQ:E::E:::::::L:::::::::::L:A:: rrnAC3340 L:D:::A::::V:::D::GD:::TQ:Q::A:::::::D:AI:D:::::::::D::L:::: Hmu1017 :ND:::A:::DV:E::::TD:::EY:Q::A::::::::::ID::::A::V::E::L:::: consensus VTVSEGEE------------------------------------ #oth 11..4353222333233333333322211111111111111111 hla1957 ::::AD:::::::::::::::::::::::::::::::::::::: HQ2639A I:::T:ADITENKNENENENPDANANTDTDAMKEETNSLENESE HVO_1592 I:::K::-:::::::::::::::::::::::::::::::::::: Hbo3249 I:::KDD::::::::::::::::::::::::::::::::::::: VNG0494 :::::E--:::::::::::::::::::::::::::::::::::: Hut0997 :A::D:QSGDETVSETTESDESESSGK::::::::::::::::: NP0216A ::::::PSGDSEAEDDADGEDGDE:::::::::::::::::::: rrnAC3340 :::::S:::::::::::::::::::::::::::::::::::::: Hmu1017 :::::::-::::::::::::::::::::::::::::::::::::