| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3560 | HQ1435A | hla0411 | HVO_0519 | Hbo1000 | VNG0133 | NP0314A | Hut2966 | rrnAC2302 | Hmu0093 |
| 2340 | HQ1435A | 3881 | 2235 | 2252 | 2349 | 1924 | 1965 | 1963 | 1983 | 1941 |
| 2669 | hla0411 | 2235 | 3719 | 2464 | 2521 | 2119 | 2183 | 2226 | 2251 | 2256 |
| 2501 | HVO_0519 | 2252 | 2464 | 3565 | 2715 | 2070 | 2028 | 2059 | 2088 | 2100 |
| 2562 | Hbo1000 | 2349 | 2521 | 2715 | 3591 | 2054 | 2060 | 2073 | 2217 | 2186 |
| 2551 | VNG0133 | 1924 | 2119 | 2070 | 2054 | 3543 | 2190 | 2133 | 2223 | 2159 |
| 2569 | NP0314A | 1965 | 2183 | 2028 | 2060 | 2190 | 3498 | 2291 | 2307 | 2296 |
| 2672 | Hut2966 | 1963 | 2226 | 2059 | 2073 | 2133 | 2291 | 3621 | 2572 | 2507 |
| 2831 | rrnAC2302 | 1983 | 2251 | 2088 | 2217 | 2223 | 2307 | 2572 | 3634 | 2817 |
| 2772 | Hmu0093 | 1941 | 2256 | 2100 | 2186 | 2159 | 2296 | 2507 | 2817 | 3592 |
539 symbols consensus MGAIEDVYADLDTD-VSEEEFREAVEDKVEQMGGLADEETAAMLIAHELRDEEVNGIADI #oth .121311.21.11.1.2321.12..13...............1.1..11332.1321..1 HQ1435A :SSLT:I:DE:::::::R:::ES:::::::::::::::::::K:::::::N:::E:V::: hla0411 ::V:::::E:::::::EF:::EA::::::::::::::::::::::::::::::ADT:::: HVO_0519 ::V:RE::D:::::::EF:::EA::N:::::::::::::::::::::::::::::::::: Hbo1000 ::::::::D:::::::PF:::EA::N::::::::::::::::::::::::::::E::::: VNG0133 :::::::::::::::::I::::::::S:::::::::::::::::::::ID:G::::V::: NP0314A ::::::I:E:::A:::::S:::::::A::::::::::::::::::::D:DGG::ET:::: Hut2966 ::::::::::::A:::::DD::::::E::::::::::::::::::::::TEN:AQTV::V rrnAC2302 ::::::I:E::E::::P:::::::::E:::::::::::::::::L::::NEN:::A:::: Hmu0093 ::::G:I::::E::E:::::::::::E:::::::::::::::::L::::NEN:::TV::: consensus EPGMDEVKFLAKVMSIGDLRTFERD--GDDE---DGRVINVEVADETGSVRVALWDDMAV #oth 22112111.11..431.131..1.12221112211.1.3.221..11142.222..33.4 HQ1435A ::::::A::::::LQ:::C::::::::::A::::::::::I::::AS:QI::TM:::::D hla0411 ::::ND::::G::T::::I::::::D:E:A::::E:::C::D:::AS::::::::::::A HVO_0519 ::::ED:::::::V:::EV:::::::::E:::::::::V:I:::::::RI::S:::E::A Hbo1000 :::::D::::G::::::E:::::::::DE:::::::::V:::::::::RI:IS:::G::E VNG0133 DSE::::::I:::TRV::V:::D:EDAD::DAAAE:::V::T:::::DD:::S:::EQ:T NP0314A :::LE:::::G::A:V:E:::::::G:E::::::::H:L:LD::::S:T::::::::D:: Hut2966 QA::E::R:::::L:::E::::::::::::::::::::::::A::::D:L:LTF::GE:: rrnAC2302 ::::::::::::::A::::K:::::::DE:::::::::::::A:::S::L:L:F::GQ:: Hmu0093 ::::N::::I:::::V:::::::::GD:E::PD:E:::::::A::::::::L:F::QE:E consensus AADE-QLEVGDVLRIKGRPKDGYNGLEVSVDKVEPDADAEIDVQPG--DGYRVDDLSLGQ #oth 425114121.2.1.13...21..211.111242.41311211.244113443222.21.3 HQ1435A D:ID::::::Q::::G:::::::DDV:ID::T:::AP::::::DIHTVNTH::E:::::L hla0411 ::E:::::::Q:::VM::::E::S:::::A::::::E:::V:::VL:::T:::E:::::A HVO_0519 G:K::N::::T::::G:::::::::V:::AS:::E:L:::V:::VL:::S:::E::A::L Hbo1000 E:T::N::::Q::::A:::::::::V::::N:::::::::::::TQ:::S:::E:::::L VNG0133 ::AD:D:AP::::::::::T:::::::::A:E::L:::EQ::::IQ:::E:DAA:::::V NP0314A :::::EV:P:Q:F::::::::::S:V:::A:RI:A:EE:::E:DLD::GRTTA:S::M:: Hut2966 :V::GEV:::::::V::::QE::::::::::QA:Q:L::T:::E::::::ETI:A:TM:: rrnAC2302 DI::GK::::::::V:::::::::::::::::A:::E::T:::E::::A:SSI:A:TM:: Hmu0093 SIA:G::D::::::VA:::QE:::::::::::A::::::TV::E::::G:STI:A::M:: consensus SDVTLRGVVLDTDSVRTFDRDDGSEGRVANLTVGDETGRVRVTLWDDRADRAEELDAGAS #oth .1.213.51.11241...1....1....1..22..2..11......23.12133312153 HQ1435A :::N:::R::S::KI::::::::::::::::S:::P:::I::::::GS:SLVDSV:PDD: hla0411 :::D:V:Q::::::I::::::::::::::::::::::::::::::::K::LV::FE::EV HVO_0519 :::N:E:KI::AGT:::::::::T::::S::S:::P::::::::::E:::L::::EP:Q: Hbo1000 :::N:K:R::S:::::::::::::::::::::L::S:::I:::::::K::L:A:F:TDIT VNG0133 :::::V:E::::EA::::::::::::::S::V:::::::::::::::Q::T:TD:::::V NP0314A :::::::::::::A::::::::::::::S:::L:::::KI::::::EQ:::::A:E::Q: Hut2966 :N::VE::::::EP::::E::::::::::::SI::::::::::::::::::V::I:::TT rrnAC2302 :::::::L::::::I:::::::::::::S:::L::::::I::::::::::::D::::::A Hmu0093 :::DV:::::::::I:::::::::::::::::I:::::::::::::::::::::I:P:TA consensus VEIVDGYVRERDGSLELHVGDRGAVDEIDE-DVEYVPDTTDIASLEIDETVDIAGVVRSA #oth 1.12......11.2..1.1.3412223221131212.1123.3422222.1..1.1.112 HQ1435A I:::::::::Q::A:::::::::TIES::::::::::::DP:ETVV::::A::::G:IET hla0411 ::VG:::::::::D:::::::::T:ERV:::::::::E:::::E:::G:::::G:G:IET HVO_0519 ::V:::::::::::::::::S::::EP:::::I::::E::::G:::LGQ::::::G:IE: Hbo1000 ::V:::::::::::::::::N::TLE:::::N:::::E:A::::::LGQ::::::G:IET VNG0133 :::::::::::E:::::::::T:::TPVPDA::SF:::::S:D:::Q:D:A::::::::V NP0314A :::::::::::E:D::::A:S:SDI::L:::S::F:::A:::D:IA:::::::::::::: Hut2966 ::V::::::::::D::V:::EE::I::L:DA::::A:E::P:DDV:L::::::G:::::T rrnAC2302 :::I:::::::::::::::::Q:::::VED:::AFE::ADP::EV:LE::A::::::::: Hmu0093 :::::::::::E:::::::::H:::::::::E:AFE::AAA:ERV::G:::::::::::: consensus DPKRTFDRDDGSEGQVRNVRIQDDTGDIRVALWGEKADLDIAPGDEVVAADVEIQDGWQD #oth .21.........1...1.1.22.3.11.......1...412311.21332.1.121...1 HQ1435A :T::::::::::K::::::::R::::::::::::D::::::DLA:Y::CT:::::E:::: hla0411 :::::::::::::::::::::K::::E:::::::D:::RE:ELA:R::FT:::V:::::: HVO_0519 :G::::::::::::::::I:VK:G::::::::::::::A:VDLA:Y::IT:A::KE:::E Hbo1000 ::::::::::::::::::I:VK::::::::::::::::T:VDLA:Y::IT:A::KE:::E VNG0133 ::T:::::::::::::::::L::::::::::::::::::::G:::::A:L:::::::::: NP0314A ::::::::::::::::::::L::N::::::::::::::::VG:::::FC::::::::::: Hut2966 ::T:::::::::::::K:I::::::D::::::::::::R:L:::::::C::::::::::: rrnAC2302 :::::::::::::::::::::::A::::::::::D:::K::::::::L:::::::::::: Hmu0093 :::::::::::::::::::::::A::::::::::D:::KE::::::IL::::::D::::: consensus DLEASAGWRSTVVVLDDGADAAT-----GGAAAGDAGPDRGGESAGLDAFAD-------- #oth .3....2.3121421224455343222236455454665756644..32.3311111111 HQ1435A :H::::::::A:YR::ERPED::T::::TVESSS:QQQTET:KAS::::::ETNSDETTV hla0411 ::::::N:::::T:::E:S::VGGASGS:S:GSS:D:DAH:TNNT::G:::G:::::::: HVO_0519 ::::::::::S:A:M:EAPEG:A::::::TD:G:S:PTPPSD:--::G::SG:::::::: Hbo1000 :::::::::::IT:M:ESPAG:A::::::TD:DA:::TSADSQAQ::G::E::::::::: VNG0133 :I::::::QAS:IP:S:STQ---:::::DD::::SD::::-----::A::GA:::::::: NP0314A ::::::::Q::::::::------:::::-------DD:::::D:::::E:SG:::::::: Hut2966 ::::::::G::::::E:::SM::TPHADDAGT::ENNVQDA:A:T::S:::::::::::: rrnAC2302 :K::::S:N::I::::::::L::::::::::GG:ASAETTDA:H:::SS:G::::::::: Hmu0093 :K::::::Q:::::::GA:S:PES::::::GDQQT:SA:G:N:::::::::::::::::: consensus ---------------------DGDDEDAASDGGAAASAGAATEDA---------GEEVE- #oth 1111111122222222222222344464343456545644544533343111112463.2 HQ1435A TASPTSQDSNITSSDSMRDNA:HNH:Q:::::::STIESPQ:SEDDNTT:::::DSD::S hla0411 :::::::DEQKAAAEAVAGETG::GGNSGVG::NGG:G::::AT:EQS::::::A::I:: HVO_0519 :::::::::::::::::::::::SSD:TSAAN:GSS:DAS:A:ST:::::::::::A::: Hbo1000 :::::::::::::::::::::GASADSNS:AA:SEQ:S:S:S:ADDPAD::::::SVE:: VNG0133 ::::::::::::::::::::::S:::P::T:DA:DTQTPHS----:::::::::DTP::: NP0314A :::::::::::::::::::::GSAAAHDG:::SDP:ADDE:AS::::::::::::D:P:T Hut2966 :::::::::::::::::::::::EGGET::::TGGST:::EDGT:D:::::::::::::: rrnAC2302 :::::::::::::::::::::E:::T::D:S:NE::AVS:G:G:TSPDGGAQSA:QQ::: Hmu0093 :::::::::::::::::::::::A::HTDDASET:GD:D:T:---:::::::::::TI:: consensus FTGTVVQAGDPVVLDDGEETMSVETDASVRLGQEVTVRGTLRDGRIDAEDVF------- #oth 1..1...223.111.1.33.43.2.31314..311.12.44213225122244322111 HQ1435A :::::::::S:::::N:TD:RR::::::L:::EV:::T:STDGQT:TPTEIDRSS:::: hla0411 :::::::T:::::::::QR:K:::::::L:::E:::::::E:::T:::D:::::::::: HVO_0519 :::::::::T::I::::TQ:KT:D:::DLG::D::::S::ET::::S::S:EVHTGAQQ Hbo1000 :::::::::N:::::N:T::R::::SE:LQ::A::::::PV:::::E:T::QSVTR::: VNG0133 :::V::::Q::LI::::::::::T:::D:T:::::::::S:D:::LH:D::TES::::: NP0314A V::::::PA:::I::N:D::IH:::::E:H:::::::::RRDGE:FV:::::::::::: Hut2966 :::::::T::::IV::::Q:VT:D:TE:::::E::::::RR:GDE:E::EL:::::::: rrnAC2302 :::::::T::::::::::Q::::::GER:Q::::I::::E:::D:LH:::::::::::: Hmu0093 :::::::T::::::::::::::::::ER:Q::::::A::::::D:L::D::::::::::