| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 7447 | NP0114A | VNG2664 | Hut1474 | rrnAC2428 | Hmu0146 | hla0417 | HVO_0349 | HQ3394A | Hbo1132 |
| 6182 | NP0114A | 8096 | 5593 | 5928 | 5937 | 5840 | 5718 | 5734 | 5729 | 5802 |
| 6199 | VNG2664 | 5593 | 7052 | 5670 | 5814 | 5833 | 5830 | 5771 | 5678 | 5739 |
| 6308 | Hut1474 | 5928 | 5670 | 7745 | 6163 | 6060 | 5918 | 5894 | 5806 | 5921 |
| 6588 | rrnAC2428 | 5937 | 5814 | 6163 | 7391 | 6559 | 6197 | 6149 | 6001 | 6126 |
| 6498 | Hmu0146 | 5840 | 5833 | 6060 | 6559 | 7321 | 6163 | 6061 | 5962 | 6065 |
| 6686 | hla0417 | 5718 | 5830 | 5918 | 6197 | 6163 | 7448 | 6388 | 6210 | 6501 |
| 6785 | HVO_0349 | 5734 | 5771 | 5894 | 6149 | 6061 | 6388 | 7459 | 6459 | 6726 |
| 6594 | HQ3394A | 5729 | 5678 | 5806 | 6001 | 5962 | 6210 | 6459 | 7458 | 6707 |
| 6760 | Hbo1132 | 5802 | 5739 | 5921 | 6126 | 6065 | 6501 | 6726 | 6707 | 7468 |
1090 symbols consensus -MSMQTPKEIGAIQFGLMDPEEYRDMSATKVITADTYDDDGFPIDMGLMDPRLGVIDPGL #oth 123413124215231111211211311111211111121112111............... NP0114A ::QG:A::K::SLS::::::::::N:::::I::::::::::::::::::::::::::::: VNG2664 :--------------------------------------------::::::::::::::: Hut1474 MSTG:S::S::RLS::::N::::::::::::::::::::::::::::::::::::::::: rrnAC2428 MS:Q:::Q:::QLS::::::::::E::::::::::::::::::::::::::::::::::: Hmu0146 :----------------::::::::::::::::::::::::::::::::::::::::::: hla0417 ::::::::VL:G:D:::::::T:::::::::::::::N:::Y:::::::::::::::::: HVO_0349 :::::::::::S:::::::::T:::::::::::::::::::Y:::::::::::::::::: HQ3394A :::T:::::::::::::::::T:::::::::::::::::::Y:::::::::::::::::: Hbo1132 :::::::::::::::::::::T:::::::::::::::::::Y:::::::::::::::::: consensus ECKTCGKHSGSCNGHFGHIELAAPVIHVGFTKLIRRLLRGTCRECGRL------------ #oth 1.1...21..1..................13........1...3.23.111111111111 NP0114A :::::::::::::::::::::::::::::HA::::::::::::K:::::::::::::::: VNG2664 ::::::QR::G:::::::::::::::::::S::::::::::::::AS::::::::::::: Hut1474 ::::::::::::::::::::::::::::::S::::::::::::::S::TAVDGSKYTDGD rrnAC2428 ::::::::::::::::::::::::::::::A::::::::::::::S:::::::::::::: Hmu0146 ::::::::::::::::::::::::::::::N::::::::::::::S:::::::::::::: hla0417 ::R:::S::::::::::::::::::::::::::::::::S::::::K::::::::::::: HVO_0349 Q:R:::Q::::::::::::::::::::::::::::::::S:::::::::::::::::::: HQ3394A ::::::S::::::::::::::::::::::::::::::::S:::N::H::::::::::::: Hbo1132 ::R:::S::::::::::::::::::::::::::::::::S:::D:::::::::::::::: consensus ---------ALTE-----------EERDE------------------------------F #oth 111111111412111111111111522211111111111111111111111111111111 NP0114A :::::::::T::DPSDREFRREYFK:::DNPPRNWFVSPEDARKAQEKAKQAAERKMAQ: VNG2664 :::::::::L::::::::::::::::K::::::::::::::::::::::::::::::::Y Hut1474 GNVDLEAAS:AA::::::::::::DKKR:::::::::::::::::::::::::::::::: rrnAC2428 :::::::::C:D::::::::::::H::::::::::::::::::::::::::::::::::: Hmu0146 :::::::::C:D::::::::::::R::E:::::::::::::::::::::::::::::::: hla0417 :::::::::::D:::::::::::::Q:::::::::::::::::::::::::::::::::: HVO_0349 :::::::::S::D:::::::::::::A::::::::::::::::::::::::::::::::Y HQ3394A ::::::::::::::::::::::::S::E:::::::::::::::::::::::::::::::: Hbo1132 :::::::::S::::::::::::::::AE:::::::::::::::::::::::::::::::: consensus RDRLERTRELGEDWSDVLKAAIRQARKADRCPHCGEP----------QYDIKHEKPTTYY #oth 31415.332125.431.211.1.1..2224..2.1241111111111.3.11....1..1 NP0114A :EE::::::I:::P:N::::::::::D::Y::::T:SDDYRERYPTA::::S::::S::L VNG2664 :EN:D:::S:RQ:V:::MT::::E:::K:H::::::V:::::::::::::V::::::::: Hut1474 KEE:R:A:::SN:P:::::S::::::S:S:::::::K:::::::::::F:V::::::::: rrnAC2428 A:::T::QD::R:LN::T:::::::::K::::F:::K::::::::::::::::::::::: Hmu0146 E:::::SE:::K:VN::T:::::::::K::::F::::::::::::::::::::::::::: hla0417 :::Y::AK:::N:EH::::::V::::::ST::F:::::::::::::::A::::::::::: HVO_0349 ::K:G::K:::D:::::M:S:V::::::N::::::S::::::::::::H::::::::::: HQ3394A :EG:Q:NE::::::T::::S:V:::::TNV::S:::T:::::::::::H::::::::::: Hbo1132 ::G:T::E::::::T::::S:V::::::S::::::A::::::::::::H::::::::::: consensus EVQDVLAGDYSERIAAAMQPD-EDEDDEGVSPNELAEET-----------GIDASRINEI #oth .224.13212322124112232223335344152.3241111111111122335311332 NP0114A :QGP:PD::VRDLL:E:LE--:GG:GGTEIEL:::V:TVNDVIKRWGGDASVTV:D:SRL VNG2664 :::Q:::S::::::::S::::::::::A::::Q::::Q::::::::::::D::I:::::: Hut1474 :IIE:PHAELA::LSM::D:PEGEP----:T:D::E:A::::::::::DG:F::G::R:L rrnAC2428 :::::::S::P:::::::EES:::P----I::I::S:::::::::::::::::S::VQ:: Hmu0146 ::::::SSE::Q::V:::E::::EAGR:RTT:S:::D::::::::::::::::P::VQ:: hla0417 ::::::S::::::::::::::::E:::P:T::Q::::K::::::::::::D::LE::::: HVO_0349 :::N:::::::::::E:::::PD:::::::D:VT::N::::::::::::::L::E:V:QV HQ3394A ::::::::::P:K::S:::::PD:DS:S:L:::S::DA::::::::::::::NVE:::N: Hbo1132 :::::::::::::::N:::::ED::::T:MA:S:::DQ::::::::::::::ALQ:V:Q: consensus LSGE-----FRPRREDRKALEK-----------------ALDID-----LTEEDMNKLMP #oth 2112111112.13321243114112222222222222221234111111.121121...1 NP0114A M::QGPGDSE:IG::HVSL:QIIGEVMSSSGAFGGRFEN:PAP:::::F:LSYSGD:::: VNG2664 :::::::::::::::::E:I:T::::::::::::::::::IGA::::::::T:::::::: Hut1474 ::DT:::::Y::D:N:IP::QEIGSALHRFNDLEEHLGDE:::ESPSSF:L::::D:::: rrnAC2428 :::::::::::::Q:::::::::::::::::::::::::::SV::::::::::::::::: Hmu0146 I::::::::::::QD::R:I:S::::::::::::::::::::V:::::::::::E::::: hla0417 MA:::::::::::K:::R:I:::::::::::::::::::::::::::::::::::::::: HVO_0349 :A::::::::::VGD:::::::::::::::::::::::::::L::::::::::::::::: HQ3394A ::::::::::::VG::::E::S:::::::::::::::::::::::::::::::::::::A Hbo1132 ::::::::::::VGD:::K:::::::::::::::::::::::V::::::::::::::::: consensus SDIRDWFEDIPDEDIETLGIDPERSRPEWMILTVLPVPPVTARPSITLDNGQRSEDDLTH #oth .11..1..31.11.2221.221321.....11.........1.................. NP0114A :NV::R::N::::::::::::::::::::::::::::::::::::::::::::::::::: VNG2664 :::::::::::G::L:A::VNSD::::::::::::::::::::::::::::::::::::: Hut1474 ::::::::E:::D:L:AI:VN::T:::::::::::::::::::::::::::::::::::: rrnAC2428 ::::::::::::::::V::MK:A::::::::::::::::::::::::::::::::::::: Hmu0146 ::::::::::::::V:V::MK:A::::::::::::::::::::::::::::::::::::: hla0417 ::::::::::::::L:V::::S:H:::::::::::::::::T:::::::::::::::::: HVO_0349 :::::::::V::::LV::::::D::::::::::::::::::::::::::::::::::::: HQ3394A ::::::::S::::::R::::::S:A:::::VM:::::::::::::::::::::::::::: Hbo1132 :::::::::::::::V::::::S:A::::::::::::::::::::::::::::::::::: consensus KLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEISGTPPARHRSGRPLKT #oth .......................................2.................... NP0114A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG2664 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1474 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2428 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0146 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0417 :::::::::::::::::::::::::::::::::::::::V:::::::::::::::::::: HVO_0349 :::::::::::::::::::::::::::::::::::::::I:::::::::::::::::::: HQ3394A :::::::::::::::::::::::::::::::::::::::I:::::::::::::::::::: Hbo1132 :::::::::::::::::::::::::::::::::::::::I:::::::::::::::::::: consensus LSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPDRVASEMTQTMNVTERN #oth ...........................................1...4.....12.111. NP0114A ::::::::::::::::::::::::::::::::::::::::::::::::::::::I:N::: VNG2664 :::::::::::::::::::::::::::::::::::::::::::::::T::::::V:N:Q: Hut1474 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::N::: rrnAC2428 :::::::::::::::::::::::::::::::::::::::::::::::K:::::::::::: Hmu0146 :::::::::::::::::::::::::::::::::::::::::::::::K::::::::N::: hla0417 :::::::::::::::::::::::::::::::::::::::::::::::M:::::L:::::: HVO_0349 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3394A :::::::::::::::::::::::::::::::::::::::::::E:::R:::::::::A:: Hbo1132 :::::::::::::::::::::::::::::::::::::::::::E:::R:::::::::::: consensus LDEARQYVRNGPEAHPGANYVKRPDGRRLKVTEKNCEELAEKVEAGWEVNRHLIDGDIVI #oth 124.11..2....2.......2......11....1......11322...3..12....1. NP0114A ::D::R::A::::S:::::::::::::::::::::::::::::NP::::A::::::::I: VNG2664 :ER::R:::::::G:::::::T::::::VR::::V::::::R::P::::Q::::::::I: Hut1474 :A::::::S::::::::::::R::::::::::::::::::::::P::::A:::L:::::: rrnAC2428 :E:::R::S::::::::::::::::::::::::::::::::::::E:::S:::V::::I: Hmu0146 ::N::R::A:::::::::::::::::::::::::::::::::::P::::S::M:::::I: hla0417 VE:::::::::::::::::::R:::::::::::::::::::::::D:::::::V:::::: HVO_0349 V::::::::::::S:::::::R::::::::::::::::::::::L::::::::V:::::: HQ3394A V:R:Q::::::::G::::::::::::::::::::::::::::ID:::::::::::::::: Hbo1132 :EQ:Q::::::::G:::::::::::::::::::::::::::::Q:::::::::::::::: consensus FNRQPSLHRMSIMAHEVVVMPYKTFRLNTVVCPPYNADFDGDEMNMHALQNEEARAEARV #oth .............................1....................1..1...... NP0114A :::::::::::::::::::::::::::::T:::::::::::::::::::::::::::::: VNG2664 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1474 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2428 :::::::::::::::::::::::::::::T:::::::::::::::::::::::::::::: Hmu0146 :::::::::::::::::::::::::::::T:::::::::::::::::::::::::::::: hla0417 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0349 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3394A ::::::::::::::::::::::::::::::::::::::::::::::::::T::S:::::: Hbo1132 ::::::::::::::::::::::::::::::::::::::::::::::::::T::::::::: consensus LMRVQEQILSPRFGENIIGAIQDHISGTYLLTHDNPEFNETQALDLLRATRIDELPEAAG #oth .......2......2..........112....14..4.3....1....1.21.1..322. NP0114A :::::::::::::::::::::::::::L::::NQ::K:::::::::::::S:::::DPD: VNG2664 ::::::::::::::::::::::::::::::::N:::R::::::S::::Q:::::::A::: Hut1474 :::::::M:::::::::::::::::TSV:::::Q::H:::::::::::::NV:::::PD: rrnAC2428 :::::::M:::::::::::::::::::::::::T::K:::::::::::::::::::::D: Hmu0146 :::::::::::::::::::::::::::::::::T::::::::::::::::::::::PES: hla0417 ::::::::::::::G::::::::::::::::::S::::T::::::::::::V::::::D: HVO_0349 ::::::::::::::::::::::::::::::::::::::V::::::::::::V:T:::P:: HQ3394A :::::::L::::::::::::::::::::::::NG::Q:S:::::::::::S::T::P::: Hbo1132 ::::::::::::::Q:::::::::::::::::NG::H:T:::::::::::S::T:::P:: consensus VDEDGRPYWTGRQIFSELLPDDLNLEFTSSAGDTVIIEDGQLIEGTIDEDAVGAFGGEIV #oth 4312.64..1.231.......2.213.1142..1.312..1134...1121..21.1.1. NP0114A Q::E:VD:::::S::::::::G:S:::::::::::E:K:::::S:::::::::::::::: VNG2664 T::::DQ::::H:::::::::::S::::GTT::::V::::::L::::AD:E::EY:S::: Hut1474 -E::::A:::::S::::::::::D:::::E:::D:V::::::L:::::DS:::::::::: rrnAC2428 :::G:EE:::::SL:::::::::::::::::::::VV::::MTG:::::::::::::::: Hmu0146 ::D::T::::::D::::::::::D:T:::E:::D::::::::V:::::DS:::G:::::: hla0417 ::DE::E:::::TL:::::::::S:H:S::T::D::::::::::::::::::::::::V: HVO_0349 EN:G:Q:::::Q::::::::::::M::::KV::::S::::::VQ:::::::::::::::: HQ3394A QT:::S:::S:::L:::::::N:::::::A:::::E:V::E::A:::::N::::::::V: Hbo1132 EE:::Q:::::::L:::::::::::S::::T::D::::::::::::::::::::::::V: consensus DTIAKVYSKTRARIFINEVASLAMRAIMHFGFSIGIDDESIPPEAEEQVDEAIDSAYDRV #oth .112.2123..1.111..112..1.2.....1..1....11251.511141..33..121 NP0114A :::C:::DN::::V:V::::T::::S:::::::::::::::ER:::::IQ::::N::E:: VNG2664 :::T::HGN::::::::::::::::S:::::::::::::TVST::R:RI::::Q:::::: Hut1474 :::::::D:::::::::::ST::V:T:::::::::::::::::A:Q:::E:::G:::::: rrnAC2428 :::::D::R:::::LV:::SA::::S::::::::S:::::::R:::::IND::::::::: Hmu0146 :::T:E::N:::::::::I:A::::S::::::::::::::V:EA::A:IT::::N::::: hla0417 ::LT:E:GE::S:V::::I:::::::::::::::::::::::::::::::D::E:::::: HVO_0349 :AL::D:::::S::::::I::::::::::::L::::::::::D::TA:::::::A:::KI HQ3394A ::L:::H::::::V:V:::::::::::::::::::::::::::A:N:::::::EG:::Q: Hbo1132 ::L::::::::S:V::::::::::::::::::::::::::::Q::G:::::::::::E:: consensus QELIETYEAGELESLPGRTVDETLEMKIMQTLGKARDSAGDIAEDHFDDDNPAVVMARSG #oth 211.22.24.1.......2...........2..1......11.221.41.....1.14.. NP0114A ET:::::RR::::::::::::::::::::::::::::::::::D:::::::::::::E:: VNG2664 ::::::::N:D::::::::::::::::::::::::::::::V::EN::E::::::::N:: Hut1474 ::::::::Q:D::::::::::::::::::::::Q:::::::::::::AE::::::::D:: rrnAC2428 E::::::DR::::::::::::::::::::::::::::::::::::::GE:::::I::E:: Hmu0146 E::::::DR::::::::::::::::::::::::::::::::::G:::::::::::::E:: hla0417 ::::A:::::::::::::G::::::::::::::::::::::::DQ::G:::::::::::: HVO_0349 :::::I::::::::::::S:::::::::::R:::::::::E::::::EE:::::::SK:: HQ3394A N:F:DV::D:::::::::::::::::::::Q:::::::::E::::::E:::::::::::: Hbo1132 E::::I::::::::::::::::::::::::Q:::::::::E::D:::T:::::::::::: consensus ARGSMLNLTQMAGCVGQQAVRGERINRGYEDRTLSHFQPNDLSAEAHGFVENSYRSGLTP #oth ..1..........1................2.....1433...11......2..14..2. NP0114A :::::::::::::::::::::::::::::::::::::K::::::D::::::::::N:::: VNG2664 :::::::::::::::::::::::::::::::::::::A:::::S::::::::::T::::: Hut1474 :::::::::::::::::::::::::::::::::::::EE::::::::::::H:::E::G: rrnAC2428 ::::::::::::::::::::::::::::::N::::::EE:::::D::::::A::::::G: Hmu0146 :::::::::::::::::::::::::::::::::::::KQ::::SD::::::A::::::N: hla0417 :::::::::::::S::::::::::::::::::::::YR:::::S:::::::::::::::: HVO_0349 ::A:::::::::::::::::::::::::::G:::::Y:KG:::::::::::::::A:::: HQ3394A ::::::::::::::::::::::::::::::G:::::Y::D:::::::::::::::G:::: Hbo1132 ::::::::::::::::::::::::::::::G:::::Y:KE:::::::::::::::G:::: consensus KEFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELEAQYDGTVRDTSDTIVQFEFGE #oth 2......................................1....1.....121....... NP0114A ::::::::::::::::::::::::::::::::::::::::::::::::::::V::::::: VNG2664 :::::::::::::::::::::::::::::::::::::::T:::::::::::::::::::: Hut1474 :::::::::::::::::::::::::::::::::::::::T::::::::::::V::::::: rrnAC2428 :::::::::::::::::::::::::::::::::::::::T:::::::::::::::::::: Hmu0146 :::::::::::::::::::::::::::::::::::::::::::::::::::N:::::::: hla0417 E:::::::::::::::::::::::::::::::::::::::::::S:::::GR:::::::: HVO_0349 R:::::::::::::::::::::::::::::::::::::::::::S:::::G::::::::: HQ3394A R:::::::::::::::::::::::::::::::::::::::::::::::::GNV::::::: Hbo1132 R:::::::::::::::::::::::::::::::::::::::::::::::::G::::::::: consensus DGTSPVKVSSNEETDI-DVENIADRILDSEFESDEEKERFLGRREPPTNLSEHADPWLDA #oth ......3...3324211..1612111132..21252124..142232..1..13342453 NP0114A ::::::R:::S::F::::::S:T:::::E::::EL:R:E:::IE::K::::::GES:RAD VNG2664 ::::::Q::::::V::::::HV:::::N:::D::TQ:AE::EVE:::::::::GAA:--- Hut1474 ::::::D:::::DF::::::A:TE::VEA::DDES::AT::E:EAS:::::::::E:WH: rrnAC2428 ::::::D::::QDG::V:::Q:::SV::E::::EKQ::S:::T:TER::::::::D:WM: Hmu0146 ::::::Q:::::::PV::::E:::SV::A::::ESI:SE:::E:TE:::::::T:D:WM: hla0417 ::::::::::G:GDG::::DD:V::VV::::D::D:::::::E:T::::::::SG:G:NK HVO_0349 ::::::::::DD::P::::::::::::T:::S::::::::::E:A:::::::::E:RV:: HQ3394A :::::::::::KD:P:::::SV:::::E:::::::::AQ::::Q:R:::I::Y:G:G::K Hbo1132 ::::::::::G:GDG:::::::T::V::A::S:S::::::::::::::::::Y:G:G::K consensus ----GVESDD #oth 225521121. NP0114A T:VQE::::: VNG2664 ::::E::::: Hut1474 ::::--:AG: rrnAC2428 ::::--:G:: Hmu0146 ::::--:G:: hla0417 ::AS:::::: HVO_0349 ::RA:::::: HQ3394A ARNL:::::: Hbo1132 AQDT::Q:::