|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2362 | hla0541 | NP1688A | HQ3137A | HVO_1918 | Hbo1790 | VNG2073 | Hut2021 | rrnAC2810 | Hmu3122 |
1449 | hla0541 | 2392 | 1228 | 1130 | 1296 | 1302 | 1100 | 1106 | 1052 | 1100 |
1490 | NP1688A | 1228 | 2289 | 1149 | 1179 | 1250 | 1151 | 1250 | 1217 | 1244 |
1535 | HQ3137A | 1130 | 1149 | 2370 | 1304 | 1498 | 1248 | 1174 | 1126 | 1111 |
1667 | HVO_1918 | 1296 | 1179 | 1304 | 2373 | 1610 | 1186 | 1171 | 1268 | 1143 |
1829 | Hbo1790 | 1302 | 1250 | 1498 | 1610 | 2373 | 1305 | 1356 | 1266 | 1223 |
1627 | VNG2073 | 1100 | 1151 | 1248 | 1186 | 1305 | 2353 | 1380 | 1283 | 1318 |
1626 | Hut2021 | 1106 | 1250 | 1174 | 1171 | 1356 | 1380 | 2331 | 1323 | 1420 |
1575 | rrnAC2810 | 1052 | 1217 | 1126 | 1268 | 1266 | 1283 | 1323 | 2570 | 1403 |
1574 | Hmu3122 | 1100 | 1244 | 1111 | 1143 | 1223 | 1318 | 1420 | 1403 | 2369 |
336 symbols consensus ---------------------------MAIGDV--RAVGGCDDLYYVDTGMYETEEYGSV #oth 111111111111111111111111111.41.1323542646613322.2..13144..3. hla0541 ::::::::::::::::::::::::::::HA:EF::ES:R:IA:::VH::::FG:D:::A: NP1688A ::::::::::::::::::::::::::::G:::::::S:ESVV:C::::::::G:DG::A: HQ3137A ::::::::::::::::::::::::::::D:::I::AT:DTA::I::M:::::::PG:::: HVO_1918 :::::::::::::::::::::::::::::::::::EP:PDST::::::S::::V:K::T: Hbo1790 :::::::::::::::::::::::::::::::::::T::P:T::V:::::::::::M:::: VNG2073 ::::::::::::::::::::::::::::SA:::::FD:S::PGISF::::::D:A::::: Hut2021 ::::::::::::::::::::::::::::G::::RQV:T:S:S::WF::::::AVSQ:::: rrnAC2810 MALPFLLPDCHDSHSITVLPPPVTRTC:G::::HEVT::D:I:VH:::V:::GVA:::P: Hmu3122 ::::::::::::::::::::::::::::::::A:V::RAVH::CW:::::::DV:::::: consensus YIIDAERPALVDTGIGTNHERILDALDEVGIAPEDLEYILPTHVHLDHAGGAGFLAEACP #oth .23.212..311..212331322331234124343234233..2.........4.22321 hla0541 :VY:T:K::VI:::T:V:R:ALFKT:::I::GR:E:AW:::::A:::::::::H:V:RY: NP1688A ::Y:T::::::::::::HYD:::::::A:::GRSE::::I:::A:::::::::::V:ETA HQ3137A :::::DQ::I::::::::Y:::I:::GR:D:DTNS:AHLFV::A:::::::::::LAD:: HVO_1918 :LV::::::::::::AADR:AVFGM:::::V--D::A::::::::::::::::Y:::RY: Hbo1790 :::::::::F::::::::::HL::::::LD::R::V::L::::I:::::::::Y::D::: VNG2073 :V:::D:::V::::T:::Y:::::::E:H::Q:A::QAV:L::::::::::::L:::::: Hut2021 ::L::::::I:E:::::H:D::::::E:::L:::AI:V:AV::::::::::::::::::: rrnAC2810 ::::::::::::::T:AR::T::S:MES:::::::::V:AA::::::::::::Y:::D:: Hmu3122 :LV:GD::::::::L:::V::V::L:EAA:V:::A:DV:AL::::::::::::P:V:::: consensus NATVYTHEIGARHLVDPERLWEGTKAAVGDQWQFYVEPTPVPEDRIEELTDGDTIDLGDR #oth 2.31521.51231131.34.21..14..21.142.32.7.2212.244121.2421..11 hla0541 ::E:RLP:K:V:::I:::A:VA:::S::Q::::Y:DD:A:::::::SG:AE::R:::::: NP1688A -:D:::P:AA:QF:I::SG::::::R:::E:I:::T::R::::S:L:P:A::A:L::::: HQ3137A ::::H:::RA:P::S::TQ:I:::R::::E:::Y::::N:A:AS::NA::::::VH:::: HVO_1918 D:::M:::L::P:::::S::I:::::::E:::R::D::L:IE:::V:G:::::E:::::: Hbo1790 ::::M:::::VS::I:::K:IA::::::::::E:::::K::::::::P::::NE:::::: VNG2073 ::D::V::L::::V::::::V::::Q:::::::Y:::::::::::VV:::::::V:::S: Hut2021 ::SIVV:::::P::AA:::::A:::Q:::::ITH::::E::::A::R:IE:::R:::::H rrnAC2810 :::::V::S:K::::::::::::::H:::::IE::GK:I::A:::::T:::::V:::::H Hmu3122 ::::FV::S::::::::A:::A:::Q:::::IDY:T::::I::S:::T:::::A:::::H consensus TLTAHHAPGHAPHQVVFHDPADDAVFTADAAGIYVPERDRVRQTSPPPQFDLEQALDDVR #oth 4.4343....12.143242466141.21..1.11414523333.1..42.3.24223.23 hla0541 E:VV:E:::::::HAFY:E:DA:V::::::::::::AV:T::P:T:::::::D:C:T:LS NP1688A E:VL:D:::::F::GIL:E:D:AV::A::::::::::L:T::E::::AD::::GVVE:AE HQ3137A S:::VA:::::L::MM:Y:TTE:TL::G::::::I:MQ::IQ:::::S::N::TC::::: HVO_1918 :::V:::::::::::M:::DG::VL:VG::L::WE:RSRTL::::::S::H:QK:::::: Hbo1790 ::SVF:::::::::TM:L:SK::LL::G::::::::::GQ:::::::S:::::AC::::: VNG2073 ::::::::::T::::::E:HSC:::::::::::W:RAQ::::E::::TD:::::CI:::E Hut2021 A:R:::::::::::::YE:::N:::::G::::L:::::G::EP:::::D:::::::R::E rrnAC2810 S:ETL::::::::::::Y:::I:G::::::::::N:ST:EMHV:T::VN:T:D::::::A Hmu3122 R:R:R::::::::::::DA:EL::::::::::::T:ST:E:HV:::::N:::DG:::::A consensus MIEDIDPETLCFGHFGP--AYTDDLLEEYKRTLVEWVEAVRQKREELGDDEAVIEHFVET #oth 3144211242212.1.2143545443531443252..2213421332521211121.335 hla0541 A::E::::Y:::::::::RE:EPS:IG:A::AY::::::::E:::A:::::::V:::E:: NP1688A L:A:L::::I:Y::::::::PAA:RI:T:IAVITD:::S:EAA::R:E:::::::::::Q HQ3137A A:DSMA::::::::::::RV:D:E::SS:::A::::::::::::G:ANS::D::QY:SDN HVO_1918 T::::::::V::::::::KP:DT::A:K:::V:::::::I::::A:::V:::::D::::H Hbo1790 T::E:A::RI::::::S:CE:SEE:M:S::::::::::::::::::::::D::::::A:H VNG2073 ::RRL:::::LYA::::GP:D::AV:K::EHV:RD::A::KREVI:RHSEA:A:D::AA: Hut2021 T:QA::::::LYS:::::::MATGQ:A::A:::SD::Q::AAA:A::E::D::::::AGE rrnAC2810 ::Q:L::DI:M:::::A::VE:G:K::T:TEI:P:::AE:ER:::::D::::::DY:::R Hmu3122 :LA:L:RTW::YA:Y:::::R::AR:D::AT::ET:::::ETA:ADRS:::::V:::::: consensus TQMDDVWGERKARAEAALNVRGVLTYLDR-RAE--- #oth 356635.23411131431.2..1.51.151533332 hla0541 SRDVEF:NPER:::D:S::S::I::::N:IEG:SEA NP1688A STI:E::::T:G:::V:M::::::Q:::S:E--::: HQ3137A AELI::::AE::::::R:::::::A:::W:Q:AQTD HVO_1918 ::::EE:::::::D:ER::T::::G:::Y:IGDDE: Hbo1790 :::T:L::::::SE:EK:::::::G:::W:Q::QE: VNG2073 :TVE:::::H:::::TKM::::::R::NT:::-::: Hut2021 :AAS:I::PD:G:G:T:M::::::::::::T:-::: rrnAC2810 ADT:T-:::::G:::MR:::::::VA::N::D:::: Hmu3122 VETPA::SDH:::::V:M::::::::::::HG:DA: