| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3237 | HQ1061A | hla1179 | VNG2533 | HVO_1816 | Hbo1672 | NP1706A | Hut1665 | rrnAC2232 | Hmu0442 |
| 2155 | HQ1061A | 3315 | 1956 | 1957 | 1905 | 2140 | 1933 | 1937 | 1894 | 1913 |
| 2375 | hla1179 | 1956 | 3305 | 1999 | 2167 | 2201 | 2020 | 1977 | 1968 | 2114 |
| 2470 | VNG2533 | 1957 | 1999 | 3240 | 2209 | 2158 | 2079 | 2087 | 2069 | 2192 |
| 2506 | HVO_1816 | 1905 | 2167 | 2209 | 3280 | 2247 | 2088 | 1932 | 2095 | 2215 |
| 2578 | Hbo1672 | 2140 | 2201 | 2158 | 2247 | 3396 | 2246 | 2157 | 2186 | 2238 |
| 2515 | NP1706A | 1933 | 2020 | 2079 | 2088 | 2246 | 3221 | 2111 | 2231 | 2194 |
| 2436 | Hut1665 | 1937 | 1977 | 2087 | 1932 | 2157 | 2111 | 3748 | 2250 | 2358 |
| 2548 | rrnAC2232 | 1894 | 1968 | 2069 | 2095 | 2186 | 2231 | 2250 | 3406 | 2478 |
| 2602 | Hmu0442 | 1913 | 2114 | 2192 | 2215 | 2238 | 2194 | 2358 | 2478 | 3240 |
533 symbols consensus -----------------MLIRNATLADGRVRDVRVRGETIDAVG---EDLDAADGERVVD #oth 1111111111111111332143.3.1...51.1.23113141131115423364325322 HQ1061A :::::::::::::::MPSVFKS:R:P:::I:::::TD:::T::S:::DSISPTSD:T:F: hla1179 ::::::::::::::::::::TG:E::::::::::I:DG:::::EPTNAG:::DT:::::: VNG2533 ::::::::::::::::MRV::D:V::::::::I:LD::R::::::::---T:L:::LF:: HVO_1816 ::::::::::::::::::R:E::::::::AV::::EDG:VE::::::-:::SV:A:ET:: Hbo1672 VKNRGAYPLRVERTDMSL::TG:::::::::::::E::::T:IE::::S::PRED::::N NP1706A :::::::::::::::::::FS::::::::::::::D::::AE:::::TG:E:DG--E::: Hut1665 :::::::::::::::::::::::::P:::R:::::D::Q:G:::::::A:SG:E:::EI: rrnAC2232 :::::::::::::::::::::::::P:::Q::::::::S:AE:::::R::::S:-QH:IE Hmu0442 :::::::::::::::::::::::::::::T:::::::::::::D:::::::P::-:DT:: consensus A-TGKRLLPGAIDAHVHFRQPGYEHKETWETGSRSAAAGGVTTVVDQPNTDPPTVDGDAF #oth .1324311..11.1.....1..33...1.31.121.......2.2.....4.1.212422 HQ1061A ::R:ML:F:::::V:::::E::G::::::K:::Q::::::::::::::::N:::TTKT:Y hla1179 ::R:RH:::::V:V:::::E::AS:::::TS:::G:::::::::::::::S::::::::: VNG2533 :NADY:V:::M:::::::::::F::::::AS:::::::::::::::::::A::::T:::V HVO_1816 ::EENL:::::::V:::::E::F:::::::::A:::::::::::A:::::::T:T::AG: Hbo1672 :::::M:F:::::::::::E::FS:::::::::Q::::::::V:A:::::Q:::TT:S:: NP1706A ::E:::::::M::::::::::::S:::::::::K::::::::A:F:::::::::I:A:GY Hut1665 :::D::::::M::::::::::::P:::::T:::Q:::::::::::::::::::::::::: rrnAC2232 :::::::F::M::V:::::::::P::::::S:::::::::::A:::::::::::I::ES: Hmu0442 ::ADRL:::::::::::::::::G:::S:AS::::::::::::::::::::::::::A:: consensus DEKAA-LAADSLVDYGINGGVTADWDPDSLFDRPLFALGEVFLADSTGDMGIDADLFADA #oth 24..413.23121.2.21...133.4.43.122221............1...3341.22. HQ1061A TS:::::::::V::::::::::P::N::T::EC:::::::::::::::K::::ET::RQ: hla1179 :::::::::::::::::::::::::::E:::E::::::::::::::::::::AL:::EE: VNG2533 :::::HA::::V::W:V:::::GE:::A:::::S::::::::::::::::::::A::R:: HVO_1816 :V::E:C::NACI:::::::::::::::::::::::::::::::::::::::E:::::E: Hbo1672 ::::G::::A::I:F::S:::::::::::::::::::::::::::::::::::::::::: NP1706A A:::S:::TA::::::::::::EN:S:TE:LEE:IA::::::::::::::::GRER::E: Hut1665 :R::D::::E::::F:L::::SPA::::::L:::V::::::::::::::::::ERR:R:: rrnAC2232 :Q::E:F::::V::W::::::::::I:NV:LR:R::::::::::::::::::E::::::: Hmu0442 :Q::E:::GE::::F:::::::GE:E:AE:L::::::::::::::::::::::::::E:: consensus LERAADADVPVTVHAEDADLFDESARDRD--------DADAWSAYRTAEAEAAAVERACE #oth 353.254213..1....133.143165233112132121.2..11.215..33.1..134 HQ1061A :I:::KTEI:::I:::::AQ:NTDIYGHESGGTGTDAAV:I::Q::S:T::IK:I:::I: hla1179 :AE::AR::::::::::ET::::::L:G:LGGVGTAAN:::::::::::::T::I:::LD VNG2533 CQ:::SE::V:::::::::R::TA:KS:S::::::::::::::::::P::::::::::V: HVO_1816 A:::GE:G:::::::::::::::::IEG:LGGVGRDA:::::::::::G:::V:::::VR Hbo1672 V::::::::T:::::::::::::::QK::TGGTGEAA:::V::Q::A::::E::::::VS NP1706A :DH:T::G:L::::::::TR:::::TE::::::::::N::::::::::A::ID:I::::: Hut1665 :AA::E:::T::::::::SR:NLG::::I:::::::::::::::::A:R::ID::::V:A rrnAC2232 ::A:T:N::::::::::::Y:NDD:KA:::::::::::::::::F:::K::EK::::::: Hmu0442 :VA::QR::T::::::::S::NRA::::::::::::::::::::F:::R::::::::::: consensus VAAEHDADIHIAHTSTPEGVDAASAAGATCEVTPHHLFLSRDDLDELGTFGRMNPPLRSE #oth 415252132....1...112.215232311.1.....1...42153...2........11 HQ1061A I:T:VG:::::::::::A:::::T:SNV::::::::::::::NAAK:::Y:::::::::: hla1179 AG::S::QV::::::::::I::V:DTD::::::::::::::E:AGR:::::::::::::: VNG2533 :GT:AG:T:::::::::::::::A:G:::::A:::::::::::::D:::::::::::::D HVO_1816 :GG:TG:Q:::::::::::::::RDG:::::A:::::::::::::::::Y:::::::::: Hbo1672 :GSDSE:::::::::::::::::K:G:::::::::::::::A:AT::::Y:::::::::: NP1706A T:D::G:::::::::::::A:I:RE::M::::::::::::::::E::::::::::::::: Hut1665 L:S:Y:V:L::::A::::AI:::G:::IST:::::::::::SS:GD:::H::::::::R: rrnAC2232 ::QK:::T:::::::::::::I::E::M:T:::::::L:::R::S:::::::::::::R: Hmu0442 :::::::R:::::::::::I:T::D::M:T:::::::L:::S:::::::H:::::::::: consensus KRREALFERLVDGDIDMVATDHAPHTRAEKDASIWDAPSGVPGVETMLPLLLEEARRGD- #oth 5..44221.133.41.21........32..32312...........32...133124251 HQ1061A A::KE:WD::IA:::::I::::::::YD::A::L:::::::::::::::::F:R:::DE: hla1179 E::A:V::::R:::V:V:::::::::V:::RQRLV:::::::::::LY:::::SV:K:N: VNG2533 P:::::::::A::R::V:::::::::::::A:D:::::::::::::A:::::GA:H::E: HVO_1816 A::::M::::A::R:::::::::::::E::ER:LL::::::::::::V::::GAVVA::: Hbo1672 D:::GMW::V:S:E::I:::::::::::::::DL::::::::::::::::::::::K:T: NP1706A T::::M::::::::::I:::::::::::::::::::::::::::::V:::::D:::K:R: Hut1665 ::::RVYD:VRN:QV:II::::::::SE::::D:::::::::::::A::::::::::DH: rrnAC2232 :::QK:Y::V:::TV::I:::::::::E::::G:::::::::::::V:::::A:::DP:S Hmu0442 :::REVYD:V:::TV::I:::::::::E::::::::::::::::::::::::A:::T::: consensus -LSYERVRDVTAANPADVFDLPRKGRIEAGADADLVLVDPDAAREIRGADLHSKCEWTPF #oth 1112..2..12.1.2.33.2125..2113.5....213.223432.5134.12313.... HQ1061A :I::::I:::::R:::SR:G:NN::H:AV:Y::::I:I::T:TQT:K:NI:::::T:::: hla1179 :::L::::::V:::::SI:EIEG:::::P:::::::V::LTNP:::EAGA::GASG:::: VNG2533 :::::::::::::::::::G:E:::H:A::R::::::::::D::::H:D::::N:::::: HVO_1816 ::TA::::::V::::::::::::::::::::::::A:Y:L:::::::::::::N:::::: Hbo1672 :I::::::::::::A:EI::::Q:::V:V:S:::::VF::EESQ::H::::::R:G:::: NP1706A :I::::L:::::::V::I::::D:::::::N:::::V::::D:EP:::DN:N:::::::: Hut1665 ::T::::::LM:::::AL:::::::::AP:Y:::::::::E:T::::A::::T::D:::: rrnAC2232 G:T::::::L::R:::::::I:Q::A::::K::::::::TTETS::S::A:::::D:::: Hmu0442 ::T::::::LV:::::::::::E::::AE:N::::::::T:DV:::T:DG:::N:G:::: consensus EGHDGVFPELTMVRGTVVYDRDD-------------FGDAVG--ENVRA----------- #oth 1.5611..23.21..43112235222111111112414353.113..1723222211111 HQ1061A D:MN:I::::::::::::::GES:::::::::::::::ST::::M::TTSE::::::::: hla1179 ::LQ:::::::T:::KIA:E::PVTGA:::::::ES::ET::::R:::ES:::::::::: VNG2533 :::V::::AM:L::::T:W:G:T:::::::::::::VSAFD:::R:::Q::::::::::: HVO_1816 :::T:::::W::L::EF:W:G:E:::::::::::::::AVA:::::::D::::::::::: Hbo1672 ::MR:::::M:L:::H:::EDGK:::::::::::::::::::::::::N::::::::::: NP1706A ::R::::::::::::::::RDGE::::::::::::::A::::HGQ::::::::::::::: Hut1665 ::WQA::::V:::::A:::E::::::::::::::ED:A:HQ:::R:::LARDVTQEAPQP rrnAC2232 ::::A::::W:::::::::E:G:ALEADDSTAQEDV:Y:HQ:::::::GADSERLE:::: Hmu0442 ::FE::::KW:::::::::::S::::::::::::DE:T:QQ::::::::::::::::::: consensus ----------------------------------------------------- #oth 11111111111111111111111111111111111111111111111111111 HQ1061A ::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1179 ::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG2533 ::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1816 ::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1672 ::::::::::::::::::::::::::::::::::::::::::::::::::::: NP1706A ::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1665 DEQTTSDGELSSASAGTAQPDLDDTGADDEVAEPSGDDTETDDVVAEPGDEVQ rrnAC2232 ::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0442 :::::::::::::::::::::::::::::::::::::::::::::::::::::